RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 NEUROD2Q15784 382 aa15.77■□□□□ 0.12
VARS2-205ENST00000469358 CFAP70Q5T0N1 1121 aa15.77■□□□□ 0.11
VARS2-205ENST00000469358 PPM1GO15355 546 aaPredicted RBP15.76■□□□□ 0.11
VARS2-205ENST00000469358 BRPF3Q9ULD4 1205 aa15.76■□□□□ 0.11
VARS2-205ENST00000469358 IGHDP01880 384 aa15.75■□□□□ 0.11
VARS2-205ENST00000469358 DAXXQ9UER7 740 aaPredicted RBP15.75■□□□□ 0.11
VARS2-205ENST00000469358 FAM161AQ3B820 660 aa15.75■□□□□ 0.11
VARS2-205ENST00000469358 RRP7AQ9Y3A4 280 aaKnown RBP15.75■□□□□ 0.11
VARS2-205ENST00000469358 IQGAP3Q86VI3 1631 aa15.74■□□□□ 0.11
VARS2-205ENST00000469358 DDRGK1Q96HY6 314 aa15.74■□□□□ 0.11
VARS2-205ENST00000469358 CARD14Q9BXL6 1004 aa15.74■□□□□ 0.11
VARS2-205ENST00000469358 EFCAB2Q5VUJ9 269 aa15.73■□□□□ 0.11
VARS2-205ENST00000469358 PANK1Q8TE04 598 aa15.73■□□□□ 0.11
VARS2-205ENST00000469358 SENP3Q9H4L4 574 aaPredicted RBP15.73■□□□□ 0.11
VARS2-205ENST00000469358 SPAG9O60271 1321 aaKnown RBP15.72■□□□□ 0.11
VARS2-205ENST00000469358 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
VARS2-205ENST00000469358 DUOX2Q9NRD8 1548 aa15.71■□□□□ 0.11
VARS2-205ENST00000469358 COG6Q9Y2V7 657 aa15.71■□□□□ 0.11
VARS2-205ENST00000469358 EIF2AK4Q9P2K8 1649 aaKnown RBP15.71■□□□□ 0.11
VARS2-205ENST00000469358 FRAT2O75474 233 aaPredicted RBP15.71■□□□□ 0.11
VARS2-205ENST00000469358 SEC24BO95487 1268 aa15.71■□□□□ 0.1
VARS2-205ENST00000469358 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.71■□□□□ 0.1
VARS2-205ENST00000469358 FRAT1Q92837 279 aaPredicted RBP15.71■□□□□ 0.1
VARS2-205ENST00000469358 TNNQ9UQP3 1299 aa15.71■□□□□ 0.1
VARS2-205ENST00000469358 ADGRF5Q8IZF2 1346 aa15.7■□□□□ 0.1
VARS2-205ENST00000469358 MAST1Q9Y2H9 1570 aa15.7■□□□□ 0.1
VARS2-205ENST00000469358 LAMC1P11047 1609 aa15.7■□□□□ 0.1
VARS2-205ENST00000469358 BCL2L13Q9BXK5 485 aa15.7■□□□□ 0.1
VARS2-205ENST00000469358 INSRP06213 1382 aa15.7■□□□□ 0.1
VARS2-205ENST00000469358 KIF3BO15066 747 aa15.69■□□□□ 0.1
VARS2-205ENST00000469358 ATP10AO60312 1499 aa15.69■□□□□ 0.1
VARS2-205ENST00000469358 ASXL1Q8IXJ9 1541 aa15.69■□□□□ 0.1
VARS2-205ENST00000469358 SCAF11Q99590 1463 aaKnown RBP15.68■□□□□ 0.1
VARS2-205ENST00000469358 GSE1Q14687 1217 aa15.68■□□□□ 0.1
VARS2-205ENST00000469358 TRMT2AQ8IZ69 625 aaKnown RBP15.68■□□□□ 0.1
VARS2-205ENST00000469358 MADDQ8WXG6 1647 aa15.68■□□□□ 0.1
VARS2-205ENST00000469358 CHGAP10645 457 aaKnown RBP15.68■□□□□ 0.1
VARS2-205ENST00000469358 CDCA8Q53HL2 280 aa15.68■□□□□ 0.1
VARS2-205ENST00000469358 CANXP27824 592 aaKnown RBP15.68■□□□□ 0.1
VARS2-205ENST00000469358 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.68■□□□□ 0.1
VARS2-205ENST00000469358 PLXNC1O60486 1568 aa15.67■□□□□ 0.1
VARS2-205ENST00000469358 RNF17Q9BXT8 1623 aaKnown RBP15.67■□□□□ 0.1
VARS2-205ENST00000469358 UGGT1Q9NYU2 1555 aa15.67■□□□□ 0.1
VARS2-205ENST00000469358 PLCH2O75038 1416 aa15.66■□□□□ 0.1
VARS2-205ENST00000469358 CLUAP1Q96AJ1 413 aa15.65■□□□□ 0.1
VARS2-205ENST00000469358 NKTRP30414 1462 aaKnown RBP15.65■□□□□ 0.1
VARS2-205ENST00000469358 PIK3C2GO75747 1445 aa15.64■□□□□ 0.09
VARS2-205ENST00000469358 E9PSI1 815 aa15.64■□□□□ 0.09
VARS2-205ENST00000469358 WWC1Q8IX03 1113 aa15.64■□□□□ 0.09
VARS2-205ENST00000469358 TRAK1Q9UPV9 953 aa15.64■□□□□ 0.09
VARS2-205ENST00000469358 SLC12A5Q9H2X9 1139 aa15.64■□□□□ 0.09
VARS2-205ENST00000469358 IQGAP1P46940 1657 aa15.63■□□□□ 0.09
VARS2-205ENST00000469358 CLTCL1P53675 1640 aa15.63■□□□□ 0.09
VARS2-205ENST00000469358 CENPJQ9HC77 1338 aaPredicted RBP15.63■□□□□ 0.09
VARS2-205ENST00000469358 NUTM2DQ5VT03 806 aaPredicted RBP15.62■□□□□ 0.09
VARS2-205ENST00000469358 USP19O94966 1318 aa15.62■□□□□ 0.09
VARS2-205ENST00000469358 ABCC2Q92887 1545 aa15.62■□□□□ 0.09
VARS2-205ENST00000469358 CHD1O14646 1710 aa15.62■□□□□ 0.09
VARS2-205ENST00000469358 TMEM132EQ6IEE7 984 aa15.62■□□□□ 0.09
VARS2-205ENST00000469358 RLBP1P12271 317 aa15.62■□□□□ 0.09
VARS2-205ENST00000469358 SLKQ9H2G2 1235 aaPredicted RBP15.62■□□□□ 0.09
VARS2-205ENST00000469358 SYNMO15061 1565 aa15.61■□□□□ 0.09
VARS2-205ENST00000469358 ERVK-7P63135 1459 aa15.6■□□□□ 0.09
VARS2-205ENST00000469358 MYOM1P52179 1685 aa15.6■□□□□ 0.09
VARS2-205ENST00000469358 MORC1Q86VD1 984 aa15.59■□□□□ 0.09
VARS2-205ENST00000469358 PCDHB15Q9Y5E8 787 aa15.59■□□□□ 0.09
VARS2-205ENST00000469358 ABCC1P33527 1531 aa15.59■□□□□ 0.09
VARS2-205ENST00000469358 EIF3AQ14152 1382 aaKnown RBP15.59■□□□□ 0.09
VARS2-205ENST00000469358 SCAPERQ9BY12 1400 aa15.58■□□□□ 0.09
VARS2-205ENST00000469358 TRPM2O94759 1503 aa15.58■□□□□ 0.09
VARS2-205ENST00000469358 TCP11L2Q8N4U5 519 aa15.58■□□□□ 0.08
VARS2-205ENST00000469358 SPRYD3Q8NCJ5 442 aa15.58■□□□□ 0.08
VARS2-205ENST00000469358 PTPRTO14522 1441 aa15.57■□□□□ 0.08
VARS2-205ENST00000469358 ARXQ96QS3 562 aa15.56■□□□□ 0.08
VARS2-205ENST00000469358 SPHKAPQ2M3C7 1700 aa15.56■□□□□ 0.08
VARS2-205ENST00000469358 SAFB2Q14151 953 aaKnown RBP eCLIP15.56■□□□□ 0.08
VARS2-205ENST00000469358 RARSP54136 660 aaKnown RBP15.55■□□□□ 0.08
VARS2-205ENST00000469358 NSD3Q9BZ95 1437 aa15.55■□□□□ 0.08
VARS2-205ENST00000469358 MTHFSP49914 203 aa15.55■□□□□ 0.08
VARS2-205ENST00000469358 POGKQ9P215 609 aa15.55■□□□□ 0.08
VARS2-205ENST00000469358 NPC1L1Q9UHC9 1359 aa15.54■□□□□ 0.08
VARS2-205ENST00000469358 CGNL1Q0VF96 1302 aa15.54■□□□□ 0.08
VARS2-205ENST00000469358 ZCCHC11Q5TAX3 1644 aaKnown RBP15.54■□□□□ 0.08
VARS2-205ENST00000469358 KANK1Q14678 1352 aa15.54■□□□□ 0.08
VARS2-205ENST00000469358 PDE3AQ14432 1141 aa15.53■□□□□ 0.08
VARS2-205ENST00000469358 ZFYVE16Q7Z3T8 1539 aa15.53■□□□□ 0.08
VARS2-205ENST00000469358 CLASP1Q7Z460 1538 aa15.53■□□□□ 0.08
VARS2-205ENST00000469358 KDM5AP29375 1690 aaKnown RBP15.52■□□□□ 0.08
VARS2-205ENST00000469358 TSR2Q969E8 191 aaKnown RBP15.52■□□□□ 0.07
VARS2-205ENST00000469358 PDZRN3Q9UPQ7 1066 aa15.52■□□□□ 0.07
VARS2-205ENST00000469358 NOS1P29475 1434 aa15.51■□□□□ 0.07
VARS2-205ENST00000469358 CEP152O94986 1710 aa15.51■□□□□ 0.07
VARS2-205ENST00000469358 GGT6Q6P531 493 aa15.51■□□□□ 0.07
VARS2-205ENST00000469358 RUNDC1Q96C34 613 aa15.5■□□□□ 0.07
VARS2-205ENST00000469358 ABCA6Q8N139 1617 aa15.5■□□□□ 0.07
VARS2-205ENST00000469358 SHROOM2Q13796 1616 aa15.5■□□□□ 0.07
VARS2-205ENST00000469358 U2AF1L5P0DN76 240 aaPredicted RBP15.49■□□□□ 0.07
VARS2-205ENST00000469358 U2AF1Q01081 240 aaKnown RBP eCLIP15.49■□□□□ 0.07
VARS2-205ENST00000469358 POLR3AO14802 1390 aaPredicted RBP15.49■□□□□ 0.07
VARS2-205ENST00000469358 CFAP65Q6ZU64 1925 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms