RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 SPATA31E1Q6ZUB1 1445 aa33.25■■■□□ 2.91
SREBF1-208ENST00000469356 RIMS2Q9UQ26 1411 aa33.25■■■□□ 2.91
SREBF1-208ENST00000469356 PPP1R15AO75807 674 aaPredicted RBP33.24■■■□□ 2.91
SREBF1-208ENST00000469356 NEUROD1Q13562 356 aa33.24■■■□□ 2.91
SREBF1-208ENST00000469356 SIN3AQ96ST3 1273 aa33.22■■■□□ 2.91
SREBF1-208ENST00000469356 DMRT2Q9Y5R5 561 aa33.22■■■□□ 2.91
SREBF1-208ENST00000469356 VGFO15240 615 aaPredicted RBP33.2■■■□□ 2.91
SREBF1-208ENST00000469356 STAC3Q96MF2 364 aa33.2■■■□□ 2.91
SREBF1-208ENST00000469356 SCAF11Q99590 1463 aaKnown RBP33.2■■■□□ 2.9
SREBF1-208ENST00000469356 POLR1AO95602 1720 aaPredicted RBP33.19■■■□□ 2.9
SREBF1-208ENST00000469356 ZFYVE9O95405 1425 aa33.18■■■□□ 2.9
SREBF1-208ENST00000469356 NCKAP5LQ9HCH0 1330 aa33.17■■■□□ 2.9
SREBF1-208ENST00000469356 LTKP29376 864 aa33.15■■■□□ 2.9
SREBF1-208ENST00000469356 NEXMIFQ5QGS0 1516 aa33.14■■■□□ 2.9
SREBF1-208ENST00000469356 BCANQ96GW7 911 aa33.13■■■□□ 2.89
SREBF1-208ENST00000469356 PPLO60437 1756 aa33.12■■■□□ 2.89
SREBF1-208ENST00000469356 STRCQ7RTU9 1775 aa33.12■■■□□ 2.89
SREBF1-208ENST00000469356 MED14O60244 1454 aa33.11■■■□□ 2.89
SREBF1-208ENST00000469356 TONSLQ96HA7 1378 aa33.1■■■□□ 2.89
SREBF1-208ENST00000469356 NPHP4O75161 1426 aaPredicted RBP33.1■■■□□ 2.89
SREBF1-208ENST00000469356 NUTM2DQ5VT03 806 aaPredicted RBP33.09■■■□□ 2.89
SREBF1-208ENST00000469356 DCAF11Q8TEB1 546 aa33.09■■■□□ 2.89
SREBF1-208ENST00000469356 PLEKHG1Q9ULL1 1385 aa33.09■■■□□ 2.89
SREBF1-208ENST00000469356 IFT172Q9UG01 1749 aa33.07■■■□□ 2.88
SREBF1-208ENST00000469356 TIMELESSQ9UNS1 1208 aa33.05■■■□□ 2.88
SREBF1-208ENST00000469356 KDM2AQ9Y2K7 1162 aa33.03■■■□□ 2.88
SREBF1-208ENST00000469356 IQGAP1P46940 1657 aa33.03■■■□□ 2.88
SREBF1-208ENST00000469356 MYOM2P54296 1465 aa33.02■■■□□ 2.88
SREBF1-208ENST00000469356 L3MBTL2Q969R5 705 aa33.02■■■□□ 2.88
SREBF1-208ENST00000469356 ADGRF5Q8IZF2 1346 aa32.96■■■□□ 2.87
SREBF1-208ENST00000469356 TBX22Q9Y458 520 aa32.95■■■□□ 2.86
SREBF1-208ENST00000469356 SETBP1Q9Y6X0 1596 aa32.94■■■□□ 2.86
SREBF1-208ENST00000469356 DIP2AQ14689 1571 aa32.94■■■□□ 2.86
SREBF1-208ENST00000469356 SLC26A8Q96RN1 970 aa32.92■■■□□ 2.86
SREBF1-208ENST00000469356 NRXN1Q9ULB1 1477 aa32.91■■■□□ 2.86
SREBF1-208ENST00000469356 SENP3Q9H4L4 574 aaPredicted RBP32.91■■■□□ 2.86
SREBF1-208ENST00000469356 PIK3C2GO75747 1445 aa32.9■■■□□ 2.86
SREBF1-208ENST00000469356 ADAMTS13Q76LX8 1427 aa32.87■■■□□ 2.85
SREBF1-208ENST00000469356 PIK3R4Q99570 1358 aa32.85■■■□□ 2.85
SREBF1-208ENST00000469356 LAMC1P11047 1609 aa32.85■■■□□ 2.85
SREBF1-208ENST00000469356 ALKQ9UM73 1620 aa32.84■■■□□ 2.85
SREBF1-208ENST00000469356 NRXN3Q9Y4C0 1643 aa32.84■■■□□ 2.85
SREBF1-208ENST00000469356 C14orf93Q9H972 538 aaKnown RBP32.84■■■□□ 2.85
SREBF1-208ENST00000469356 PRAG1Q86YV5 1406 aa32.82■■■□□ 2.84
SREBF1-208ENST00000469356 CFAP70Q5T0N1 1121 aa32.79■■■□□ 2.84
SREBF1-208ENST00000469356 KIAA1210Q9ULL0 1709 aa32.77■■■□□ 2.84
SREBF1-208ENST00000469356 KCNA6P17658 529 aa32.77■■■□□ 2.84
SREBF1-208ENST00000469356 CHD2O14647 1828 aaKnown RBP32.73■■■□□ 2.83
SREBF1-208ENST00000469356 SETD1AO15047 1707 aaKnown RBP32.73■■■□□ 2.83
SREBF1-208ENST00000469356 METP08581 1390 aa32.72■■■□□ 2.83
SREBF1-208ENST00000469356 AMOTL2Q9Y2J4 779 aa32.71■■■□□ 2.83
SREBF1-208ENST00000469356 ZNF335Q9H4Z2 1342 aaPredicted RBP32.7■■■□□ 2.83
SREBF1-208ENST00000469356 TMEM132EQ6IEE7 984 aa32.68■■■□□ 2.82
SREBF1-208ENST00000469356 NBPF8Q3BBV2 869 aa32.67■■■□□ 2.82
SREBF1-208ENST00000469356 CPS1P31327 1500 aa32.66■■■□□ 2.82
SREBF1-208ENST00000469356 NWD1Q149M9 1564 aa32.65■■■□□ 2.82
SREBF1-208ENST00000469356 LRPPRCP42704 1394 aaKnown RBP32.65■■■□□ 2.82
SREBF1-208ENST00000469356 TRPM1Q7Z4N2 1603 aa32.65■■■□□ 2.82
SREBF1-208ENST00000469356 ROCK2O75116 1388 aaKnown RBP32.64■■■□□ 2.82
SREBF1-208ENST00000469356 NKTRP30414 1462 aaKnown RBP32.63■■■□□ 2.81
SREBF1-208ENST00000469356 YTHDC2Q9H6S0 1430 aaKnown RBP32.63■■■□□ 2.81
SREBF1-208ENST00000469356 PTPRUQ92729 1446 aa32.62■■■□□ 2.81
SREBF1-208ENST00000469356 ABCC11Q96J66 1382 aa32.62■■■□□ 2.81
SREBF1-208ENST00000469356 STK26Q9P289 416 aa32.62■■■□□ 2.81
SREBF1-208ENST00000469356 ZEB1P37275 1124 aaPredicted RBP32.6■■■□□ 2.81
SREBF1-208ENST00000469356 NBPF1Q3BBV0 1214 aa32.6■■■□□ 2.81
SREBF1-208ENST00000469356 PROSER2Q86WR7 435 aaPredicted RBP32.6■■■□□ 2.81
SREBF1-208ENST00000469356 ADGRB1O14514 1584 aa32.6■■■□□ 2.81
SREBF1-208ENST00000469356 RALGAPBQ86X10 1494 aa32.6■■■□□ 2.81
SREBF1-208ENST00000469356 ASXL1Q8IXJ9 1541 aa32.59■■■□□ 2.81
SREBF1-208ENST00000469356 XRN1Q8IZH2 1706 aaKnown RBP32.59■■■□□ 2.81
SREBF1-208ENST00000469356 SIRT1Q96EB6 747 aa32.57■■■□□ 2.8
SREBF1-208ENST00000469356 STRCP1A6NGW2 1772 aa32.57■■■□□ 2.8
SREBF1-208ENST00000469356 KNDC1Q76NI1 1749 aa32.56■■■□□ 2.8
SREBF1-208ENST00000469356 LTBP4Q8N2S1 1624 aa32.56■■■□□ 2.8
SREBF1-208ENST00000469356 TECPR2O15040 1411 aa32.55■■■□□ 2.8
SREBF1-208ENST00000469356 PTCH1Q13635 1447 aa32.55■■■□□ 2.8
SREBF1-208ENST00000469356 CARD11Q9BXL7 1154 aa32.55■■■□□ 2.8
SREBF1-208ENST00000469356 TRAK1Q9UPV9 953 aa32.54■■■□□ 2.8
SREBF1-208ENST00000469356 GPRASP1Q5JY77 1395 aa32.54■■■□□ 2.8
SREBF1-208ENST00000469356 DLC1Q96QB1 1528 aa32.52■■■□□ 2.8
SREBF1-208ENST00000469356 NCOA3Q9Y6Q9 1424 aa32.51■■■□□ 2.79
SREBF1-208ENST00000469356 POGKQ9P215 609 aa32.51■■■□□ 2.79
SREBF1-208ENST00000469356 FAM135BQ49AJ0 1406 aa32.5■■■□□ 2.79
SREBF1-208ENST00000469356 EIF3AQ14152 1382 aaKnown RBP32.49■■■□□ 2.79
SREBF1-208ENST00000469356 LRRC7Q96NW7 1537 aa32.49■■■□□ 2.79
SREBF1-208ENST00000469356 C14orf37Q86TY3 774 aa32.48■■■□□ 2.79
SREBF1-208ENST00000469356 TMEM94Q12767 1356 aa32.47■■■□□ 2.79
SREBF1-208ENST00000469356 ROBO2Q9HCK4 1378 aa32.47■■■□□ 2.79
SREBF1-208ENST00000469356 PRAM1Q96QH2 718 aa32.44■■■□□ 2.78
SREBF1-208ENST00000469356 CERKQ8TCT0 537 aa32.43■■■□□ 2.78
SREBF1-208ENST00000469356 IQSEC2Q5JU85 1478 aa32.42■■■□□ 2.78
SREBF1-208ENST00000469356 WAPLQ7Z5K2 1190 aa32.41■■■□□ 2.78
SREBF1-208ENST00000469356 ARHGEF28Q8N1W1 1705 aaKnown RBP32.4■■■□□ 2.78
SREBF1-208ENST00000469356 MSH6P52701 1360 aa32.39■■■□□ 2.78
SREBF1-208ENST00000469356 C19orf44Q9H6X5 657 aa32.39■■■□□ 2.78
SREBF1-208ENST00000469356 CENPJQ9HC77 1338 aaPredicted RBP32.38■■■□□ 2.77
SREBF1-208ENST00000469356 RBM33Q96EV2 1170 aaKnown RBP32.37■■■□□ 2.77
SREBF1-208ENST00000469356 SLC24A1O60721 1099 aa32.35■■■□□ 2.77
SREBF1-208ENST00000469356 XIRP1Q702N8 1843 aaKnown RBP32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms