RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 REM2Q8IYK8 340 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-204ENST00000469232 ARID4BQ4LE39 1312 aaPredicted RBP11.85□□□□□ -0.51
NPHP3-204ENST00000469232 FER1L4A9Z1Z3 1794 aa11.85□□□□□ -0.51
NPHP3-204ENST00000469232 SLC52A1Q9NWF4 448 aa11.84□□□□□ -0.51
NPHP3-204ENST00000469232 ADGRB3O60242 1522 aa11.83□□□□□ -0.51
NPHP3-204ENST00000469232 MADDQ8WXG6 1647 aa11.83□□□□□ -0.52
NPHP3-204ENST00000469232 MLECQ14165 292 aa11.83□□□□□ -0.52
NPHP3-204ENST00000469232 C3P01024 1663 aa11.83□□□□□ -0.52
NPHP3-204ENST00000469232 KDM5AP29375 1690 aaKnown RBP11.82□□□□□ -0.52
NPHP3-204ENST00000469232 PPP1R15AO75807 674 aaPredicted RBP11.82□□□□□ -0.52
NPHP3-204ENST00000469232 POTEHQ6S545 545 aa11.82□□□□□ -0.52
NPHP3-204ENST00000469232 CHRDL2Q6WN34 429 aa11.82□□□□□ -0.52
NPHP3-204ENST00000469232 ZNF692Q9BU19 519 aaPredicted RBP11.82□□□□□ -0.52
NPHP3-204ENST00000469232 UHRF1BP1Q6BDS2 1440 aa11.82□□□□□ -0.52
NPHP3-204ENST00000469232 UGGT1Q9NYU2 1555 aa11.81□□□□□ -0.52
NPHP3-204ENST00000469232 L3MBTL2Q969R5 705 aa11.81□□□□□ -0.52
NPHP3-204ENST00000469232 STAC3Q96MF2 364 aa11.81□□□□□ -0.52
NPHP3-204ENST00000469232 TONSLQ96HA7 1378 aa11.8□□□□□ -0.52
NPHP3-204ENST00000469232 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
NPHP3-204ENST00000469232 FBXO31Q5XUX0 539 aaPredicted RBP11.8□□□□□ -0.52
NPHP3-204ENST00000469232 TMEM131LA2VDJ0 1609 aa11.8□□□□□ -0.52
NPHP3-204ENST00000469232 SSUH2Q9Y2M2 353 aa11.79□□□□□ -0.52
NPHP3-204ENST00000469232 KIF1BO60333 1816 aa11.79□□□□□ -0.52
NPHP3-204ENST00000469232 NLRP1Q9C000 1473 aa11.79□□□□□ -0.52
NPHP3-204ENST00000469232 IDI1Q13907 227 aa11.78□□□□□ -0.52
NPHP3-204ENST00000469232 ESF1Q9H501 851 aaKnown RBP11.78□□□□□ -0.52
NPHP3-204ENST00000469232 TNRQ92752 1358 aa11.78□□□□□ -0.52
NPHP3-204ENST00000469232 IFT172Q9UG01 1749 aa11.78□□□□□ -0.52
NPHP3-204ENST00000469232 RIMS1Q86UR5 1692 aaKnown RBP11.78□□□□□ -0.52
NPHP3-204ENST00000469232 CFAP65Q6ZU64 1925 aaKnown RBP11.78□□□□□ -0.52
NPHP3-204ENST00000469232 NRXN1Q9ULB1 1477 aa11.77□□□□□ -0.52
NPHP3-204ENST00000469232 MYOM2P54296 1465 aa11.77□□□□□ -0.53
NPHP3-204ENST00000469232 ZFYVE9O95405 1425 aa11.77□□□□□ -0.53
NPHP3-204ENST00000469232 RPGRIP1LQ68CZ1 1315 aa11.76□□□□□ -0.53
NPHP3-204ENST00000469232 A2ML1A8K2U0 1454 aa11.75□□□□□ -0.53
NPHP3-204ENST00000469232 PTPRMP28827 1452 aa11.75□□□□□ -0.53
NPHP3-204ENST00000469232 SETD1BQ9UPS6 1966 aaKnown RBP11.74□□□□□ -0.53
NPHP3-204ENST00000469232 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
NPHP3-204ENST00000469232 PRAG1Q86YV5 1406 aa11.74□□□□□ -0.53
NPHP3-204ENST00000469232 NEXMIFQ5QGS0 1516 aa11.74□□□□□ -0.53
NPHP3-204ENST00000469232 PPLO60437 1756 aa11.73□□□□□ -0.53
NPHP3-204ENST00000469232 UBR1Q8IWV7 1749 aa11.73□□□□□ -0.53
NPHP3-204ENST00000469232 CEBPAP49715 358 aaPredicted RBP11.72□□□□□ -0.53
NPHP3-204ENST00000469232 NBPF8Q3BBV2 869 aa11.72□□□□□ -0.53
NPHP3-204ENST00000469232 ZNF142P52746 1687 aaPredicted RBP11.72□□□□□ -0.53
NPHP3-204ENST00000469232 MYO3AQ8NEV4 1616 aa11.72□□□□□ -0.53
NPHP3-204ENST00000469232 GPRASP1Q5JY77 1395 aa11.71□□□□□ -0.53
NPHP3-204ENST00000469232 RALGAPBQ86X10 1494 aa11.71□□□□□ -0.53
NPHP3-204ENST00000469232 ARHGAP23Q9P227 1491 aa11.71□□□□□ -0.53
NPHP3-204ENST00000469232 SLIT1O75093 1534 aa11.71□□□□□ -0.53
NPHP3-204ENST00000469232 KIAA1210Q9ULL0 1709 aa11.71□□□□□ -0.54
NPHP3-204ENST00000469232 MYO5BQ9ULV0 1848 aa11.71□□□□□ -0.54
NPHP3-204ENST00000469232 KDM4FA0A1W2PPD8 638 aa11.71□□□□□ -0.54
NPHP3-204ENST00000469232 RGL3Q3MIN7 710 aa11.69□□□□□ -0.54
NPHP3-204ENST00000469232 DCAF11Q8TEB1 546 aa11.69□□□□□ -0.54
NPHP3-204ENST00000469232 TRPM1Q7Z4N2 1603 aa11.69□□□□□ -0.54
NPHP3-204ENST00000469232 PIK3C2GO75747 1445 aa11.69□□□□□ -0.54
NPHP3-204ENST00000469232 CEP170BQ9Y4F5 1589 aaPredicted RBP11.69□□□□□ -0.54
NPHP3-204ENST00000469232 LAMC1P11047 1609 aa11.68□□□□□ -0.54
NPHP3-204ENST00000469232 TMEM2Q9UHN6 1383 aa11.68□□□□□ -0.54
NPHP3-204ENST00000469232 RIMS2Q9UQ26 1411 aa11.66□□□□□ -0.54
NPHP3-204ENST00000469232 VGFO15240 615 aaPredicted RBP11.66□□□□□ -0.54
NPHP3-204ENST00000469232 ADGRF5Q8IZF2 1346 aa11.66□□□□□ -0.54
NPHP3-204ENST00000469232 SETBP1Q9Y6X0 1596 aa11.66□□□□□ -0.54
NPHP3-204ENST00000469232 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.64□□□□□ -0.55
NPHP3-204ENST00000469232 C14orf93Q9H972 538 aaKnown RBP11.64□□□□□ -0.55
NPHP3-204ENST00000469232 ADGRB1O14514 1584 aa11.64□□□□□ -0.55
NPHP3-204ENST00000469232 THEMISQ8N1K5 641 aaPredicted RBP11.64□□□□□ -0.55
NPHP3-204ENST00000469232 SPDYE1Q8NFV5 336 aaPredicted RBP11.64□□□□□ -0.55
NPHP3-204ENST00000469232 MED14O60244 1454 aa11.63□□□□□ -0.55
NPHP3-204ENST00000469232 NRXN3Q9Y4C0 1643 aa11.63□□□□□ -0.55
NPHP3-204ENST00000469232 CHGAP10645 457 aaKnown RBP11.63□□□□□ -0.55
NPHP3-204ENST00000469232 ZNF326Q5BKZ1 582 aaKnown RBP11.63□□□□□ -0.55
NPHP3-204ENST00000469232 KDM2AQ9Y2K7 1162 aa11.63□□□□□ -0.55
NPHP3-204ENST00000469232 SETD1AO15047 1707 aaKnown RBP11.62□□□□□ -0.55
NPHP3-204ENST00000469232 HDGFP51858 240 aaKnown RBP11.62□□□□□ -0.55
NPHP3-204ENST00000469232 PLEKHG1Q9ULL1 1385 aa11.61□□□□□ -0.55
NPHP3-204ENST00000469232 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
NPHP3-204ENST00000469232 PIP4P2Q8N4L2 257 aa11.6□□□□□ -0.55
NPHP3-204ENST00000469232 STAG3Q9UJ98 1225 aa11.6□□□□□ -0.55
NPHP3-204ENST00000469232 CLEC11AQ9Y240 323 aa11.6□□□□□ -0.55
NPHP3-204ENST00000469232 ALKQ9UM73 1620 aa11.6□□□□□ -0.55
NPHP3-204ENST00000469232 ASXL1Q8IXJ9 1541 aa11.6□□□□□ -0.55
NPHP3-204ENST00000469232 LTKP29376 864 aa11.6□□□□□ -0.55
NPHP3-204ENST00000469232 NBPF1Q3BBV0 1214 aa11.6□□□□□ -0.55
NPHP3-204ENST00000469232 IQGAP1P46940 1657 aa11.59□□□□□ -0.55
NPHP3-204ENST00000469232 SCAF11Q99590 1463 aaKnown RBP11.59□□□□□ -0.55
NPHP3-204ENST00000469232 ADAMTS13Q76LX8 1427 aa11.59□□□□□ -0.55
NPHP3-204ENST00000469232 ROCK2O75116 1388 aaKnown RBP11.58□□□□□ -0.56
NPHP3-204ENST00000469232 FXR2P51116 673 aaKnown RBP eCLIP11.57□□□□□ -0.56
NPHP3-204ENST00000469232 CFAP70Q5T0N1 1121 aa11.57□□□□□ -0.56
NPHP3-204ENST00000469232 DIP2AQ14689 1571 aa11.57□□□□□ -0.56
NPHP3-204ENST00000469232 LMTK3Q96Q04 1460 aa11.57□□□□□ -0.56
NPHP3-204ENST00000469232 USP47Q96K76 1375 aa11.56□□□□□ -0.56
NPHP3-204ENST00000469232 TXNDC2Q86VQ3 553 aa11.56□□□□□ -0.56
NPHP3-204ENST00000469232 EIF4G2P78344 907 aaKnown RBP eCLIP11.55□□□□□ -0.56
NPHP3-204ENST00000469232 CARD11Q9BXL7 1154 aa11.55□□□□□ -0.56
NPHP3-204ENST00000469232 TBX22Q9Y458 520 aa11.55□□□□□ -0.56
NPHP3-204ENST00000469232 EID1Q9Y6B2 187 aa11.55□□□□□ -0.56
NPHP3-204ENST00000469232 TECPR2O15040 1411 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms