RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 RIMS2Q9UQ26 1411 aa12.58□□□□□ -0.4
SSBP1-208ENST00000469123 RPGRIP1LQ68CZ1 1315 aa12.58□□□□□ -0.4
SSBP1-208ENST00000469123 PPP1R15AO75807 674 aaPredicted RBP12.56□□□□□ -0.4
SSBP1-208ENST00000469123 PLEKHG1Q9ULL1 1385 aa12.56□□□□□ -0.4
SSBP1-208ENST00000469123 LTKP29376 864 aa12.55□□□□□ -0.4
SSBP1-208ENST00000469123 DIP2AQ14689 1571 aa12.55□□□□□ -0.4
SSBP1-208ENST00000469123 ANKRD30BQ9BXX2 1392 aa12.55□□□□□ -0.4
SSBP1-208ENST00000469123 ZNF326Q5BKZ1 582 aaKnown RBP12.54□□□□□ -0.4
SSBP1-208ENST00000469123 FOXD1Q16676 465 aa12.53□□□□□ -0.4
SSBP1-208ENST00000469123 IQSEC2Q5JU85 1478 aa12.53□□□□□ -0.4
SSBP1-208ENST00000469123 CPS1P31327 1500 aa12.52□□□□□ -0.4
SSBP1-208ENST00000469123 NEXMIFQ5QGS0 1516 aa12.52□□□□□ -0.4
SSBP1-208ENST00000469123 VGFO15240 615 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-208ENST00000469123 SPATA31E1Q6ZUB1 1445 aa12.52□□□□□ -0.41
SSBP1-208ENST00000469123 STAC3Q96MF2 364 aa12.51□□□□□ -0.41
SSBP1-208ENST00000469123 PIK3R4Q99570 1358 aa12.51□□□□□ -0.41
SSBP1-208ENST00000469123 PPLO60437 1756 aa12.51□□□□□ -0.41
SSBP1-208ENST00000469123 SETBP1Q9Y6X0 1596 aa12.5□□□□□ -0.41
SSBP1-208ENST00000469123 LTBP4Q8N2S1 1624 aa12.49□□□□□ -0.41
SSBP1-208ENST00000469123 BCANQ96GW7 911 aa12.49□□□□□ -0.41
SSBP1-208ENST00000469123 TBX22Q9Y458 520 aa12.49□□□□□ -0.41
SSBP1-208ENST00000469123 IFT172Q9UG01 1749 aa12.48□□□□□ -0.41
SSBP1-208ENST00000469123 ZNF335Q9H4Z2 1342 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-208ENST00000469123 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.41
SSBP1-208ENST00000469123 MYOM2P54296 1465 aa12.46□□□□□ -0.41
SSBP1-208ENST00000469123 KCNA6P17658 529 aa12.46□□□□□ -0.41
SSBP1-208ENST00000469123 CERKQ8TCT0 537 aa12.46□□□□□ -0.41
SSBP1-208ENST00000469123 NWD1Q149M9 1564 aa12.46□□□□□ -0.42
SSBP1-208ENST00000469123 ADAMTS13Q76LX8 1427 aa12.45□□□□□ -0.42
SSBP1-208ENST00000469123 DHX57Q6P158 1386 aaKnown RBP12.45□□□□□ -0.42
SSBP1-208ENST00000469123 CHD2O14647 1828 aaKnown RBP12.45□□□□□ -0.42
SSBP1-208ENST00000469123 NRXN3Q9Y4C0 1643 aa12.44□□□□□ -0.42
SSBP1-208ENST00000469123 RGL3Q3MIN7 710 aa12.44□□□□□ -0.42
SSBP1-208ENST00000469123 SLC26A8Q96RN1 970 aa12.43□□□□□ -0.42
SSBP1-208ENST00000469123 LAMC1P11047 1609 aa12.43□□□□□ -0.42
SSBP1-208ENST00000469123 NRXN1Q9ULB1 1477 aa12.42□□□□□ -0.42
SSBP1-208ENST00000469123 NUTM2DQ5VT03 806 aaPredicted RBP12.42□□□□□ -0.42
SSBP1-208ENST00000469123 NCOA3Q9Y6Q9 1424 aa12.42□□□□□ -0.42
SSBP1-208ENST00000469123 STRCP1A6NGW2 1772 aa12.41□□□□□ -0.42
SSBP1-208ENST00000469123 PIK3C2GO75747 1445 aa12.41□□□□□ -0.42
SSBP1-208ENST00000469123 PCGF6Q9BYE7 350 aa12.41□□□□□ -0.42
SSBP1-208ENST00000469123 ALKQ9UM73 1620 aa12.4□□□□□ -0.42
SSBP1-208ENST00000469123 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
SSBP1-208ENST00000469123 PRAG1Q86YV5 1406 aa12.4□□□□□ -0.42
SSBP1-208ENST00000469123 SETD1AO15047 1707 aaKnown RBP12.4□□□□□ -0.43
SSBP1-208ENST00000469123 LRRC7Q96NW7 1537 aa12.39□□□□□ -0.43
SSBP1-208ENST00000469123 ADGRF5Q8IZF2 1346 aa12.38□□□□□ -0.43
SSBP1-208ENST00000469123 XRN1Q8IZH2 1706 aaKnown RBP12.38□□□□□ -0.43
SSBP1-208ENST00000469123 FBXO41Q8TF61 875 aa12.38□□□□□ -0.43
SSBP1-208ENST00000469123 PTCH1Q13635 1447 aa12.37□□□□□ -0.43
SSBP1-208ENST00000469123 DCAF11Q8TEB1 546 aa12.37□□□□□ -0.43
SSBP1-208ENST00000469123 METP08581 1390 aa12.36□□□□□ -0.43
SSBP1-208ENST00000469123 PROSER2Q86WR7 435 aaPredicted RBP12.36□□□□□ -0.43
SSBP1-208ENST00000469123 AMOTL2Q9Y2J4 779 aa12.36□□□□□ -0.43
SSBP1-208ENST00000469123 TOM1O60784 492 aa12.35□□□□□ -0.43
SSBP1-208ENST00000469123 C14orf93Q9H972 538 aaKnown RBP12.35□□□□□ -0.43
SSBP1-208ENST00000469123 KNDC1Q76NI1 1749 aa12.34□□□□□ -0.43
SSBP1-208ENST00000469123 KIAA1210Q9ULL0 1709 aa12.34□□□□□ -0.43
SSBP1-208ENST00000469123 MSH6P52701 1360 aa12.34□□□□□ -0.43
SSBP1-208ENST00000469123 TMEM94Q12767 1356 aa12.34□□□□□ -0.43
SSBP1-208ENST00000469123 TECPR2O15040 1411 aa12.34□□□□□ -0.43
SSBP1-208ENST00000469123 PTPRUQ92729 1446 aa12.34□□□□□ -0.43
SSBP1-208ENST00000469123 XIRP1Q702N8 1843 aaKnown RBP12.34□□□□□ -0.43
SSBP1-208ENST00000469123 LRPPRCP42704 1394 aaKnown RBP12.33□□□□□ -0.44
SSBP1-208ENST00000469123 DCCP43146 1447 aa12.33□□□□□ -0.44
SSBP1-208ENST00000469123 ABCC11Q96J66 1382 aa12.32□□□□□ -0.44
SSBP1-208ENST00000469123 SIRT1Q96EB6 747 aa12.32□□□□□ -0.44
SSBP1-208ENST00000469123 SENP3Q9H4L4 574 aaPredicted RBP12.32□□□□□ -0.44
SSBP1-208ENST00000469123 KDM2AQ9Y2K7 1162 aa12.32□□□□□ -0.44
SSBP1-208ENST00000469123 TONSLQ96HA7 1378 aa12.31□□□□□ -0.44
SSBP1-208ENST00000469123 YTHDC2Q9H6S0 1430 aaKnown RBP12.31□□□□□ -0.44
SSBP1-208ENST00000469123 UBAP1LF5GYI3 381 aa12.31□□□□□ -0.44
SSBP1-208ENST00000469123 FAM135BQ49AJ0 1406 aa12.3□□□□□ -0.44
SSBP1-208ENST00000469123 NEUROD1Q13562 356 aa12.3□□□□□ -0.44
SSBP1-208ENST00000469123 CADPS2Q86UW7 1296 aa12.3□□□□□ -0.44
SSBP1-208ENST00000469123 SIN3AQ96ST3 1273 aa12.3□□□□□ -0.44
SSBP1-208ENST00000469123 C19orf44Q9H6X5 657 aa12.3□□□□□ -0.44
SSBP1-208ENST00000469123 TIMELESSQ9UNS1 1208 aa12.3□□□□□ -0.44
SSBP1-208ENST00000469123 DLC1Q96QB1 1528 aa12.3□□□□□ -0.44
SSBP1-208ENST00000469123 ASXL1Q8IXJ9 1541 aa12.29□□□□□ -0.44
SSBP1-208ENST00000469123 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
SSBP1-208ENST00000469123 C14orf37Q86TY3 774 aa12.29□□□□□ -0.44
SSBP1-208ENST00000469123 L3MBTL2Q969R5 705 aa12.29□□□□□ -0.44
SSBP1-208ENST00000469123 ADGRB1O14514 1584 aa12.29□□□□□ -0.44
SSBP1-208ENST00000469123 ADGRL3Q9HAR2 1447 aa12.28□□□□□ -0.44
SSBP1-208ENST00000469123 ATF3P18847 181 aa12.27□□□□□ -0.45
SSBP1-208ENST00000469123 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.27□□□□□ -0.45
SSBP1-208ENST00000469123 ROBO2Q9HCK4 1378 aa12.27□□□□□ -0.45
SSBP1-208ENST00000469123 TMEM132EQ6IEE7 984 aa12.25□□□□□ -0.45
SSBP1-208ENST00000469123 CDC42BPGQ6DT37 1551 aa12.24□□□□□ -0.45
SSBP1-208ENST00000469123 NALCNQ8IZF0 1738 aa12.24□□□□□ -0.45
SSBP1-208ENST00000469123 CCER1Q8TC90 406 aaPredicted RBP12.24□□□□□ -0.45
SSBP1-208ENST00000469123 STK26Q9P289 416 aa12.24□□□□□ -0.45
SSBP1-208ENST00000469123 TRPM1Q7Z4N2 1603 aa12.23□□□□□ -0.45
SSBP1-208ENST00000469123 ILDR1Q86SU0 546 aaPredicted RBP12.23□□□□□ -0.45
SSBP1-208ENST00000469123 SLAIN2Q9P270 581 aa12.22□□□□□ -0.45
SSBP1-208ENST00000469123 ROCK2O75116 1388 aaKnown RBP12.21□□□□□ -0.45
SSBP1-208ENST00000469123 EIF3AQ14152 1382 aaKnown RBP12.21□□□□□ -0.45
SSBP1-208ENST00000469123 GPRASP1Q5JY77 1395 aa12.21□□□□□ -0.45
SSBP1-208ENST00000469123 ARHGEF28Q8N1W1 1705 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms