RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 ADGRL2O95490 1459 aa24.19■■□□□ 1.46
SRRM1-207ENST00000468822 APLP2Q06481 763 aa24.19■■□□□ 1.46
SRRM1-207ENST00000468822 BCANQ96GW7 911 aa24.17■■□□□ 1.46
SRRM1-207ENST00000468822 SLAIN2Q9P270 581 aa24.17■■□□□ 1.46
SRRM1-207ENST00000468822 MSH6P52701 1360 aa24.16■■□□□ 1.46
SRRM1-207ENST00000468822 MYO5BQ9ULV0 1848 aa24.16■■□□□ 1.46
SRRM1-207ENST00000468822 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
SRRM1-207ENST00000468822 RPRD2Q5VT52 1461 aaKnown RBP24.13■■□□□ 1.45
SRRM1-207ENST00000468822 ANKRD50Q9ULJ7 1429 aa24.13■■□□□ 1.45
SRRM1-207ENST00000468822 RIMS2Q9UQ26 1411 aa24.13■■□□□ 1.45
SRRM1-207ENST00000468822 CHD2O14647 1828 aaKnown RBP24.12■■□□□ 1.45
SRRM1-207ENST00000468822 TMEM131LA2VDJ0 1609 aa24.12■■□□□ 1.45
SRRM1-207ENST00000468822 PHLPP1O60346 1717 aa24.12■■□□□ 1.45
SRRM1-207ENST00000468822 GCC2Q8IWJ2 1684 aa24.11■■□□□ 1.45
SRRM1-207ENST00000468822 FAM50AQ14320 339 aaKnown RBP24.1■■□□□ 1.45
SRRM1-207ENST00000468822 SETD1AO15047 1707 aaKnown RBP24.1■■□□□ 1.45
SRRM1-207ENST00000468822 JCADQ9P266 1359 aa24.09■■□□□ 1.45
SRRM1-207ENST00000468822 COL16A1Q07092 1604 aaPredicted RBP24.08■■□□□ 1.45
SRRM1-207ENST00000468822 PPP1R15AO75807 674 aaPredicted RBP24.07■■□□□ 1.44
SRRM1-207ENST00000468822 NUTM2DQ5VT03 806 aaPredicted RBP24.06■■□□□ 1.44
SRRM1-207ENST00000468822 TBX22Q9Y458 520 aa24.06■■□□□ 1.44
SRRM1-207ENST00000468822 ADAMTS13Q76LX8 1427 aa24.06■■□□□ 1.44
SRRM1-207ENST00000468822 LRP6O75581 1613 aa24.06■■□□□ 1.44
SRRM1-207ENST00000468822 UNC13BO14795 1591 aa24.03■■□□□ 1.44
SRRM1-207ENST00000468822 CHGAP10645 457 aaKnown RBP24.01■■□□□ 1.43
SRRM1-207ENST00000468822 E9PCH4 1651 aa24.01■■□□□ 1.43
SRRM1-207ENST00000468822 NCOA3Q9Y6Q9 1424 aa24.01■■□□□ 1.43
SRRM1-207ENST00000468822 HDGFP51858 240 aaKnown RBP24■■□□□ 1.43
SRRM1-207ENST00000468822 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.99■■□□□ 1.43
SRRM1-207ENST00000468822 C14orf37Q86TY3 774 aa23.98■■□□□ 1.43
SRRM1-207ENST00000468822 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.97■■□□□ 1.43
SRRM1-207ENST00000468822 PTPRUQ92729 1446 aa23.97■■□□□ 1.43
SRRM1-207ENST00000468822 AHDC1Q5TGY3 1603 aaPredicted RBP23.96■■□□□ 1.43
SRRM1-207ENST00000468822 C19orf44Q9H6X5 657 aa23.96■■□□□ 1.43
SRRM1-207ENST00000468822 SPATA31A6Q5VVP1 1343 aa23.95■■□□□ 1.42
SRRM1-207ENST00000468822 DIP2AQ14689 1571 aa23.95■■□□□ 1.42
SRRM1-207ENST00000468822 CADPS2Q86UW7 1296 aa23.94■■□□□ 1.42
SRRM1-207ENST00000468822 PIK3R4Q99570 1358 aa23.93■■□□□ 1.42
SRRM1-207ENST00000468822 IQGAP3Q86VI3 1631 aa23.92■■□□□ 1.42
SRRM1-207ENST00000468822 ATF3P18847 181 aa23.92■■□□□ 1.42
SRRM1-207ENST00000468822 AMOTL2Q9Y2J4 779 aa23.92■■□□□ 1.42
SRRM1-207ENST00000468822 BRINP3Q76B58 766 aa23.91■■□□□ 1.42
SRRM1-207ENST00000468822 SHPRHQ149N8 1683 aa23.91■■□□□ 1.42
SRRM1-207ENST00000468822 MEX3CQ5U5Q3 659 aaKnown RBP23.9■■□□□ 1.42
SRRM1-207ENST00000468822 TRIM52Q96A61 297 aa23.89■■□□□ 1.41
SRRM1-207ENST00000468822 ROCK1Q13464 1354 aa23.89■■□□□ 1.41
SRRM1-207ENST00000468822 TRPM2O94759 1503 aa23.89■■□□□ 1.41
SRRM1-207ENST00000468822 UPF1Q92900 1129 aaKnown RBP eCLIP23.88■■□□□ 1.41
SRRM1-207ENST00000468822 NRXN3Q9Y4C0 1643 aa23.88■■□□□ 1.41
SRRM1-207ENST00000468822 ZNF772Q68DY9 489 aaPredicted RBP23.87■■□□□ 1.41
SRRM1-207ENST00000468822 NUP155O75694 1391 aa23.87■■□□□ 1.41
SRRM1-207ENST00000468822 XRN1Q8IZH2 1706 aaKnown RBP23.84■■□□□ 1.41
SRRM1-207ENST00000468822 ASXL1Q8IXJ9 1541 aa23.84■■□□□ 1.41
SRRM1-207ENST00000468822 NUTM2BA6NNL0 878 aaPredicted RBP23.83■■□□□ 1.41
SRRM1-207ENST00000468822 NUTM2EB1AL46 878 aaPredicted RBP23.83■■□□□ 1.41
SRRM1-207ENST00000468822 NUTM2AQ8IVF1 878 aaPredicted RBP23.83■■□□□ 1.41
SRRM1-207ENST00000468822 SRCAPQ6ZRS2 3230 aa23.82■■□□□ 1.4
SRRM1-207ENST00000468822 DCCP43146 1447 aa23.82■■□□□ 1.4
SRRM1-207ENST00000468822 MST1RQ04912 1400 aa23.82■■□□□ 1.4
SRRM1-207ENST00000468822 METP08581 1390 aa23.81■■□□□ 1.4
SRRM1-207ENST00000468822 SETBP1Q9Y6X0 1596 aa23.81■■□□□ 1.4
SRRM1-207ENST00000468822 SETD5Q9C0A6 1442 aa23.79■■□□□ 1.4
SRRM1-207ENST00000468822 RXRBP28702 533 aa23.79■■□□□ 1.4
SRRM1-207ENST00000468822 ITGAEP38570 1179 aa23.79■■□□□ 1.4
SRRM1-207ENST00000468822 DDX17Q92841 729 aaKnown RBP23.79■■□□□ 1.4
SRRM1-207ENST00000468822 NHSL1Q5SYE7 1610 aa23.77■■□□□ 1.4
SRRM1-207ENST00000468822 AFF2P51816 1311 aa23.77■■□□□ 1.4
SRRM1-207ENST00000468822 SPHKAPQ2M3C7 1700 aa23.75■■□□□ 1.39
SRRM1-207ENST00000468822 CDK12Q9NYV4 1490 aaPredicted RBP23.74■■□□□ 1.39
SRRM1-207ENST00000468822 ZNF326Q5BKZ1 582 aaKnown RBP23.73■■□□□ 1.39
SRRM1-207ENST00000468822 ADGRL3Q9HAR2 1447 aa23.72■■□□□ 1.39
SRRM1-207ENST00000468822 PNPLA6Q8IY17 1366 aa23.71■■□□□ 1.39
SRRM1-207ENST00000468822 NALCNQ8IZF0 1738 aa23.7■■□□□ 1.39
SRRM1-207ENST00000468822 NEXMIFQ5QGS0 1516 aa23.7■■□□□ 1.38
SRRM1-207ENST00000468822 LRRC59Q96AG4 307 aaKnown RBP23.7■■□□□ 1.38
SRRM1-207ENST00000468822 CLTCL1P53675 1640 aa23.7■■□□□ 1.38
SRRM1-207ENST00000468822 PPARGC1BQ86YN6 1023 aaKnown RBP23.69■■□□□ 1.38
SRRM1-207ENST00000468822 RGS12O14924 1447 aa23.68■■□□□ 1.38
SRRM1-207ENST00000468822 C8orf37Q96NL8 207 aa23.68■■□□□ 1.38
SRRM1-207ENST00000468822 FOXD1Q16676 465 aa23.66■■□□□ 1.38
SRRM1-207ENST00000468822 QTRT2Q9H974 415 aaKnown RBP23.65■■□□□ 1.38
SRRM1-207ENST00000468822 C1orf167Q5SNV9 1468 aa23.64■■□□□ 1.38
SRRM1-207ENST00000468822 RBM6P78332 1123 aaKnown RBP23.62■■□□□ 1.37
SRRM1-207ENST00000468822 ROBO2Q9HCK4 1378 aa23.62■■□□□ 1.37
SRRM1-207ENST00000468822 ADAMTS2O95450 1211 aa23.61■■□□□ 1.37
SRRM1-207ENST00000468822 ORAI2Q96SN7 254 aa23.6■■□□□ 1.37
SRRM1-207ENST00000468822 LAMC1P11047 1609 aa23.59■■□□□ 1.37
SRRM1-207ENST00000468822 EP400Q96L91 3159 aa23.58■■□□□ 1.37
SRRM1-207ENST00000468822 PTCH1Q13635 1447 aa23.58■■□□□ 1.36
SRRM1-207ENST00000468822 SOS2Q07890 1332 aaPredicted RBP23.58■■□□□ 1.36
SRRM1-207ENST00000468822 NGLY1Q96IV0 654 aa23.57■■□□□ 1.36
SRRM1-207ENST00000468822 KIF1BO60333 1816 aa23.54■■□□□ 1.36
SRRM1-207ENST00000468822 NAIPQ13075 1403 aa23.54■■□□□ 1.36
SRRM1-207ENST00000468822 PRAG1Q86YV5 1406 aa23.52■■□□□ 1.36
SRRM1-207ENST00000468822 USP21Q9UK80 565 aa23.5■■□□□ 1.35
SRRM1-207ENST00000468822 VGFO15240 615 aaPredicted RBP23.49■■□□□ 1.35
SRRM1-207ENST00000468822 FNBP4Q8N3X1 1017 aaPredicted RBP23.49■■□□□ 1.35
SRRM1-207ENST00000468822 ATRNO75882 1429 aa23.46■■□□□ 1.35
SRRM1-207ENST00000468822 COL22A1Q8NFW1 1626 aaPredicted RBP23.46■■□□□ 1.35
SRRM1-207ENST00000468822 RRBP1Q9P2E9 1410 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms