RNA–Protein interactions for RNA: ENST00000467849.1

CCNL1-210, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-210ENST00000467849 PCDHB3Q9Y5E6 796 aa10.79□□□□□ -0.68
CCNL1-210ENST00000467849 LAPTM4AQ15012 233 aa10.78□□□□□ -0.68
CCNL1-210ENST00000467849 RSPH4AQ5TD94 716 aa10.78□□□□□ -0.68
CCNL1-210ENST00000467849 PPP1R18Q6NYC8 613 aa10.78□□□□□ -0.68
CCNL1-210ENST00000467849 ZNF516Q92618 1163 aa10.78□□□□□ -0.68
CCNL1-210ENST00000467849 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.78□□□□□ -0.68
CCNL1-210ENST00000467849 ZPR1O75312 459 aa10.77□□□□□ -0.69
CCNL1-210ENST00000467849 COPS2P61201 443 aa10.77□□□□□ -0.69
CCNL1-210ENST00000467849 PXYLP1Q8TE99 480 aa10.77□□□□□ -0.69
CCNL1-210ENST00000467849 TMUB1Q9BVT8 246 aa10.77□□□□□ -0.69
CCNL1-210ENST00000467849 GNPATO15228 680 aa10.76□□□□□ -0.69
CCNL1-210ENST00000467849 RBM26Q5T8P6 1007 aaKnown RBP10.76□□□□□ -0.69
CCNL1-210ENST00000467849 V9GY48 417 aaPredicted RBP10.76□□□□□ -0.69
CCNL1-210ENST00000467849 ACTN4O43707 911 aaKnown RBP10.75□□□□□ -0.69
CCNL1-210ENST00000467849 FAM161AQ3B820 660 aa10.74□□□□□ -0.69
CCNL1-210ENST00000467849 METTL3Q86U44 580 aaKnown RBP10.74□□□□□ -0.69
CCNL1-210ENST00000467849 CFHP08603 1231 aa10.73□□□□□ -0.69
CCNL1-210ENST00000467849 VSIG10Q8N0Z9 540 aa10.73□□□□□ -0.69
CCNL1-210ENST00000467849 TULP1O00294 542 aaPredicted RBP10.72□□□□□ -0.69
CCNL1-210ENST00000467849 PRKD2Q9BZL6 878 aa10.72□□□□□ -0.69
CCNL1-210ENST00000467849 BLOC1S3Q6QNY0 202 aa10.7□□□□□ -0.7
CCNL1-210ENST00000467849 NKX2-3Q8TAU0 364 aa10.7□□□□□ -0.7
CCNL1-210ENST00000467849 KDM2AQ9Y2K7 1162 aa10.7□□□□□ -0.7
CCNL1-210ENST00000467849 GPR37O15354 613 aa10.69□□□□□ -0.7
CCNL1-210ENST00000467849 GPIHBP1Q8IV16 184 aa10.69□□□□□ -0.7
CCNL1-210ENST00000467849 NR1I2O75469 434 aa10.68□□□□□ -0.7
CCNL1-210ENST00000467849 SLC10A3P09131 477 aa10.68□□□□□ -0.7
CCNL1-210ENST00000467849 Q6ZNB5 142 aa10.67□□□□□ -0.7
CCNL1-210ENST00000467849 DAXXQ9UER7 740 aaPredicted RBP10.67□□□□□ -0.7
CCNL1-210ENST00000467849 FECHP22830 423 aa10.64□□□□□ -0.71
CCNL1-210ENST00000467849 SULF1Q8IWU6 871 aa10.64□□□□□ -0.71
CCNL1-210ENST00000467849 NRG2O14511 850 aaPredicted RBP10.63□□□□□ -0.71
CCNL1-210ENST00000467849 GFRA3O60609 400 aa10.63□□□□□ -0.71
CCNL1-210ENST00000467849 ADH1BP00325 375 aa10.62□□□□□ -0.71
CCNL1-210ENST00000467849 ANKLE1Q8NAG6 615 aa10.62□□□□□ -0.71
CCNL1-210ENST00000467849 RNF223E7ERA6 249 aa10.61□□□□□ -0.71
CCNL1-210ENST00000467849 RDH13Q8NBN7 331 aa10.61□□□□□ -0.71
CCNL1-210ENST00000467849 TLL1O43897 1013 aa10.6□□□□□ -0.71
CCNL1-210ENST00000467849 SCUBE3Q8IX30 993 aa10.58□□□□□ -0.72
CCNL1-210ENST00000467849 DDX11L8A8MPP1 907 aa10.57□□□□□ -0.72
CCNL1-210ENST00000467849 SLC19A1P41440 591 aa10.57□□□□□ -0.72
CCNL1-210ENST00000467849 MAP2K5Q13163 448 aa10.57□□□□□ -0.72
CCNL1-210ENST00000467849 S1PR4O95977 384 aa10.56□□□□□ -0.72
CCNL1-210ENST00000467849 SLC6A16Q9GZN6 736 aa10.56□□□□□ -0.72
CCNL1-210ENST00000467849 PDZRN3Q9UPQ7 1066 aa10.56□□□□□ -0.72
CCNL1-210ENST00000467849 ATP6V1AP38606 617 aa10.55□□□□□ -0.72
CCNL1-210ENST00000467849 GCGRP47871 477 aa10.54□□□□□ -0.72
CCNL1-210ENST00000467849 GRIPAP1Q4V328 841 aa10.54□□□□□ -0.72
CCNL1-210ENST00000467849 SPSB2Q99619 263 aa10.54□□□□□ -0.72
CCNL1-210ENST00000467849 PUS10Q3MIT2 529 aaKnown RBP10.53□□□□□ -0.72
CCNL1-210ENST00000467849 MORN1Q5T089 497 aa10.53□□□□□ -0.72
CCNL1-210ENST00000467849 TRAF7Q6Q0C0 670 aa10.53□□□□□ -0.72
CCNL1-210ENST00000467849 PHOX2BQ99453 314 aa10.53□□□□□ -0.72
CCNL1-210ENST00000467849 FUT2Q10981 343 aa10.52□□□□□ -0.73
CCNL1-210ENST00000467849 SALL2Q9Y467 1007 aaPredicted RBP10.52□□□□□ -0.73
CCNL1-210ENST00000467849 MINK1Q8N4C8 1332 aaPredicted RBP10.52□□□□□ -0.73
CCNL1-210ENST00000467849 SPRYD7Q5W111 196 aa10.51□□□□□ -0.73
CCNL1-210ENST00000467849 ZNF598Q86UK7 904 aaKnown RBP10.51□□□□□ -0.73
CCNL1-210ENST00000467849 IRF6O14896 467 aa10.5□□□□□ -0.73
CCNL1-210ENST00000467849 FMNL1O95466 1100 aaPredicted RBP10.5□□□□□ -0.73
CCNL1-210ENST00000467849 NLRP7Q8WX94 980 aa10.5□□□□□ -0.73
CCNL1-210ENST00000467849 PRR20EP86478 221 aa10.49□□□□□ -0.73
CCNL1-210ENST00000467849 PRR20CP86479 221 aa10.49□□□□□ -0.73
CCNL1-210ENST00000467849 PRR20DP86480 221 aa10.49□□□□□ -0.73
CCNL1-210ENST00000467849 PRR20BP86481 221 aa10.49□□□□□ -0.73
CCNL1-210ENST00000467849 PRR20AP86496 221 aa10.49□□□□□ -0.73
CCNL1-210ENST00000467849 PPEF1O14829 653 aaPredicted RBP10.48□□□□□ -0.73
CCNL1-210ENST00000467849 EMID1Q96A84 441 aaPredicted RBP10.47□□□□□ -0.73
CCNL1-210ENST00000467849 THAP11Q96EK4 314 aa10.47□□□□□ -0.73
CCNL1-210ENST00000467849 Q3C1V9 767 aa10.46□□□□□ -0.73
CCNL1-210ENST00000467849 SLC27A5Q9Y2P5 690 aa10.46□□□□□ -0.73
CCNL1-210ENST00000467849 CD46P15529 392 aa10.45□□□□□ -0.74
CCNL1-210ENST00000467849 ZNF697Q5TEC3 545 aa10.45□□□□□ -0.74
CCNL1-210ENST00000467849 LIAT1Q6ZQX7 453 aa10.45□□□□□ -0.74
CCNL1-210ENST00000467849 USP46P62068 366 aa10.44□□□□□ -0.74
CCNL1-210ENST00000467849 LMOD2Q6P5Q4 547 aa10.44□□□□□ -0.74
CCNL1-210ENST00000467849 RPIAP49247 311 aa10.43□□□□□ -0.74
CCNL1-210ENST00000467849 MSS51Q4VC12 460 aa10.43□□□□□ -0.74
CCNL1-210ENST00000467849 BRICD5Q6PL45 260 aa10.43□□□□□ -0.74
CCNL1-210ENST00000467849 TRIM67Q6ZTA4 783 aa10.43□□□□□ -0.74
CCNL1-210ENST00000467849 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.42□□□□□ -0.74
CCNL1-210ENST00000467849 CCDC102AQ96A19 550 aa10.42□□□□□ -0.74
CCNL1-210ENST00000467849 LCE2BO14633 110 aa10.41□□□□□ -0.74
CCNL1-210ENST00000467849 KDM4AO75164 1064 aa10.41□□□□□ -0.74
CCNL1-210ENST00000467849 DGAT1O75907 488 aa10.41□□□□□ -0.74
CCNL1-210ENST00000467849 CLCN1P35523 988 aa10.41□□□□□ -0.74
CCNL1-210ENST00000467849 MDM2Q00987 491 aaPredicted RBP10.41□□□□□ -0.74
CCNL1-210ENST00000467849 PKDCCQ504Y2 493 aa10.4□□□□□ -0.74
CCNL1-210ENST00000467849 PLA2G2CQ5R387 149 aa10.4□□□□□ -0.74
CCNL1-210ENST00000467849 FAM160A2Q8N612 972 aaPredicted RBP10.4□□□□□ -0.74
CCNL1-210ENST00000467849 GPCPD1Q9NPB8 672 aa10.4□□□□□ -0.74
CCNL1-210ENST00000467849 FCF1Q9Y324 198 aaKnown RBP10.4□□□□□ -0.74
CCNL1-210ENST00000467849 GDF9O60383 454 aa10.39□□□□□ -0.75
CCNL1-210ENST00000467849 CD2BP2O95400 341 aaKnown RBP10.39□□□□□ -0.75
CCNL1-210ENST00000467849 KRI1Q8N9T8 703 aaKnown RBP10.39□□□□□ -0.75
CCNL1-210ENST00000467849 ZBTB24O43167 697 aaPredicted RBP10.36□□□□□ -0.75
CCNL1-210ENST00000467849 RNF19BQ6ZMZ0 732 aa10.36□□□□□ -0.75
CCNL1-210ENST00000467849 MMP16P51512 607 aa10.34□□□□□ -0.75
CCNL1-210ENST00000467849 USB1Q9BQ65 265 aaKnown RBP10.34□□□□□ -0.75
CCNL1-210ENST00000467849 FAM217BQ9NTX9 383 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms