RNA–Protein interactions for RNA: ENST00000467728.5

NR1H3-217, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-217ENST00000467728 VIRMAQ69YN4 1812 aaKnown RBP16.48■□□□□ 0.23
NR1H3-217ENST00000467728 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
NR1H3-217ENST00000467728 KIAA0556O60303 1618 aa16.48■□□□□ 0.23
NR1H3-217ENST00000467728 TRIM44Q96DX7 344 aaPredicted RBP16.47■□□□□ 0.23
NR1H3-217ENST00000467728 CANXP27824 592 aaKnown RBP16.47■□□□□ 0.23
NR1H3-217ENST00000467728 ANKRD30AQ9BXX3 1397 aa16.47■□□□□ 0.23
NR1H3-217ENST00000467728 PODXL2Q9NZ53 605 aa16.47■□□□□ 0.23
NR1H3-217ENST00000467728 JPH4Q96JJ6 628 aa16.46■□□□□ 0.23
NR1H3-217ENST00000467728 PLEKHG5O94827 1062 aa16.46■□□□□ 0.22
NR1H3-217ENST00000467728 CHMP5Q9NZZ3 219 aa16.46■□□□□ 0.22
NR1H3-217ENST00000467728 CGNL1Q0VF96 1302 aa16.45■□□□□ 0.22
NR1H3-217ENST00000467728 CHD1O14646 1710 aa16.45■□□□□ 0.22
NR1H3-217ENST00000467728 GAS2L3Q86XJ1 694 aa16.45■□□□□ 0.22
NR1H3-217ENST00000467728 PDCL3Q9H2J4 239 aa16.44■□□□□ 0.22
NR1H3-217ENST00000467728 KNSTRNQ9Y448 316 aa16.44■□□□□ 0.22
NR1H3-217ENST00000467728 NKTRP30414 1462 aaKnown RBP16.44■□□□□ 0.22
NR1H3-217ENST00000467728 COL17A1Q9UMD9 1497 aaPredicted RBP16.44■□□□□ 0.22
NR1H3-217ENST00000467728 TMF1P82094 1093 aa16.44■□□□□ 0.22
NR1H3-217ENST00000467728 PDZRN3Q9UPQ7 1066 aa16.43■□□□□ 0.22
NR1H3-217ENST00000467728 PCDHB15Q9Y5E8 787 aa16.43■□□□□ 0.22
NR1H3-217ENST00000467728 PRAG1Q86YV5 1406 aa16.43■□□□□ 0.22
NR1H3-217ENST00000467728 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
NR1H3-217ENST00000467728 KIAA1211Q6ZU35 1233 aa16.42■□□□□ 0.22
NR1H3-217ENST00000467728 PDE3AQ14432 1141 aa16.42■□□□□ 0.22
NR1H3-217ENST00000467728 ERBINQ96RT1 1412 aa16.41■□□□□ 0.22
NR1H3-217ENST00000467728 TPM2P07951 284 aa16.41■□□□□ 0.22
NR1H3-217ENST00000467728 TNNQ9UQP3 1299 aa16.41■□□□□ 0.22
NR1H3-217ENST00000467728 MFAP1P55081 439 aaKnown RBP16.41■□□□□ 0.22
NR1H3-217ENST00000467728 RBM10P98175 930 aaKnown RBP16.41■□□□□ 0.22
NR1H3-217ENST00000467728 E9PSI1 815 aa16.4■□□□□ 0.22
NR1H3-217ENST00000467728 C22orf23Q9BZE7 217 aa16.39■□□□□ 0.22
NR1H3-217ENST00000467728 CENPJQ9HC77 1338 aaPredicted RBP16.39■□□□□ 0.21
NR1H3-217ENST00000467728 ADGRL2O95490 1459 aa16.39■□□□□ 0.21
NR1H3-217ENST00000467728 AMER1Q5JTC6 1135 aaPredicted RBP16.39■□□□□ 0.21
NR1H3-217ENST00000467728 RLBP1P12271 317 aa16.38■□□□□ 0.21
NR1H3-217ENST00000467728 MAGI2Q86UL8 1455 aa16.38■□□□□ 0.21
NR1H3-217ENST00000467728 ADGBQ8N7X0 1667 aa16.37■□□□□ 0.21
NR1H3-217ENST00000467728 NUP153P49790 1475 aaKnown RBP16.37■□□□□ 0.21
NR1H3-217ENST00000467728 DDX11L8A8MPP1 907 aa16.37■□□□□ 0.21
NR1H3-217ENST00000467728 KDM5DQ9BY66 1539 aa16.37■□□□□ 0.21
NR1H3-217ENST00000467728 TRPM1Q7Z4N2 1603 aa16.37■□□□□ 0.21
NR1H3-217ENST00000467728 PMFBP1Q8TBY8 1022 aa16.37■□□□□ 0.21
NR1H3-217ENST00000467728 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
NR1H3-217ENST00000467728 GPATCH8Q9UKJ3 1502 aaKnown RBP16.36■□□□□ 0.21
NR1H3-217ENST00000467728 BCL2L13Q9BXK5 485 aa16.36■□□□□ 0.21
NR1H3-217ENST00000467728 PRDM4Q9UKN5 801 aa16.35■□□□□ 0.21
NR1H3-217ENST00000467728 CARMIL2Q6F5E8 1435 aa16.34■□□□□ 0.21
NR1H3-217ENST00000467728 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
NR1H3-217ENST00000467728 GPRASP1Q5JY77 1395 aa16.34■□□□□ 0.21
NR1H3-217ENST00000467728 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
NR1H3-217ENST00000467728 TNPO1Q92973 898 aaKnown RBP16.34■□□□□ 0.21
NR1H3-217ENST00000467728 PLB1Q6P1J6 1458 aa16.34■□□□□ 0.21
NR1H3-217ENST00000467728 HSCBQ8IWL3 235 aa16.33■□□□□ 0.21
NR1H3-217ENST00000467728 RIPK4P57078 832 aa16.33■□□□□ 0.2
NR1H3-217ENST00000467728 CALD1Q05682 793 aaKnown RBP16.33■□□□□ 0.2
NR1H3-217ENST00000467728 CCDC144AA2RUR9 1427 aa16.33■□□□□ 0.2
NR1H3-217ENST00000467728 FAM13BQ9NYF5 915 aa16.32■□□□□ 0.2
NR1H3-217ENST00000467728 ISY1Q9ULR0 285 aaKnown RBP16.32■□□□□ 0.2
NR1H3-217ENST00000467728 TSPY4P0CV99 314 aa16.32■□□□□ 0.2
NR1H3-217ENST00000467728 TSPY10P0CW01 314 aa16.32■□□□□ 0.2
NR1H3-217ENST00000467728 ARID3AQ99856 593 aa16.32■□□□□ 0.2
NR1H3-217ENST00000467728 RAPGEF6Q8TEU7 1601 aa16.31■□□□□ 0.2
NR1H3-217ENST00000467728 WDR7Q9Y4E6 1490 aa16.31■□□□□ 0.2
NR1H3-217ENST00000467728 RTEL1-TNFRSF6BF6WH68 1400 aa16.31■□□□□ 0.2
NR1H3-217ENST00000467728 TROQ12816 1431 aaPredicted RBP16.31■□□□□ 0.2
NR1H3-217ENST00000467728 C9orf84Q5VXU9 1444 aa16.3■□□□□ 0.2
NR1H3-217ENST00000467728 WWC1Q8IX03 1113 aa16.3■□□□□ 0.2
NR1H3-217ENST00000467728 RWDD1Q9H446 243 aaPredicted RBP16.3■□□□□ 0.2
NR1H3-217ENST00000467728 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
NR1H3-217ENST00000467728 HNRNPMP52272 730 aaKnown RBP eCLIP16.3■□□□□ 0.2
NR1H3-217ENST00000467728 RARSP54136 660 aaKnown RBP16.3■□□□□ 0.2
NR1H3-217ENST00000467728 CLASP1Q7Z460 1538 aa16.29■□□□□ 0.2
NR1H3-217ENST00000467728 A0A0U1RQG5 324 aaPredicted RBP16.29■□□□□ 0.2
NR1H3-217ENST00000467728 OFD1O75665 1012 aa16.29■□□□□ 0.2
NR1H3-217ENST00000467728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.21e-6■■□□□ 11.6
NR1H3-217ENST00000467728 RRP7AQ9Y3A4 280 aaKnown RBP16.29■□□□□ 0.2
NR1H3-217ENST00000467728 A2MP01023 1474 aa16.29■□□□□ 0.2
NR1H3-217ENST00000467728 ZSCAN30Q86W11 494 aa16.29■□□□□ 0.2
NR1H3-217ENST00000467728 PRDM15P57071 1507 aaPredicted RBP16.29■□□□□ 0.2
NR1H3-217ENST00000467728 DDIT3P35638 169 aa16.28■□□□□ 0.2
NR1H3-217ENST00000467728 R3HCC1Q9Y3T6 440 aaKnown RBP16.28■□□□□ 0.2
NR1H3-217ENST00000467728 SHROOM2Q13796 1616 aa16.28■□□□□ 0.2
NR1H3-217ENST00000467728 ERCC6L2Q5T890 1561 aa16.28■□□□□ 0.2
NR1H3-217ENST00000467728 NASPP49321 788 aaPredicted RBP16.27■□□□□ 0.2
NR1H3-217ENST00000467728 CROCC2H7BZ55 1655 aa16.27■□□□□ 0.2
NR1H3-217ENST00000467728 CCDC173Q0VFZ6 552 aa16.26■□□□□ 0.19
NR1H3-217ENST00000467728 MSNP26038 577 aaKnown RBP16.26■□□□□ 0.19
NR1H3-217ENST00000467728 NINLQ9Y2I6 1382 aa16.26■□□□□ 0.19
NR1H3-217ENST00000467728 PTPRGP23470 1445 aa16.26■□□□□ 0.19
NR1H3-217ENST00000467728 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
NR1H3-217ENST00000467728 GBP4Q96PP9 640 aa16.25■□□□□ 0.19
NR1H3-217ENST00000467728 PIK3C2GO75747 1445 aa16.25■□□□□ 0.19
NR1H3-217ENST00000467728 PPP1R9BQ96SB3 815 aa16.25■□□□□ 0.19
NR1H3-217ENST00000467728 HSP90AB1P08238 724 aaKnown RBP16.24■□□□□ 0.19
NR1H3-217ENST00000467728 ABCA8O94911 1581 aa16.24■□□□□ 0.19
NR1H3-217ENST00000467728 RAB3GAP1Q15042 981 aa16.23■□□□□ 0.19
NR1H3-217ENST00000467728 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.23■□□□□ 0.19
NR1H3-217ENST00000467728 ZMYM3Q14202 1370 aa16.23■□□□□ 0.19
NR1H3-217ENST00000467728 PLA2R1Q13018 1463 aa16.23■□□□□ 0.19
NR1H3-217ENST00000467728 SKOR2Q2VWA4 1001 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms