RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 E9PCH4 1651 aa22.04■■□□□ 1.12
RB1-202ENST00000467505 NKTRP30414 1462 aaKnown RBP22.04■■□□□ 1.12
RB1-202ENST00000467505 PPP1R15AO75807 674 aaPredicted RBP22.04■■□□□ 1.12
RB1-202ENST00000467505 TMEM131LA2VDJ0 1609 aa22.04■■□□□ 1.12
RB1-202ENST00000467505 NWD1Q149M9 1564 aa22.03■■□□□ 1.12
RB1-202ENST00000467505 TMEM94Q12767 1356 aa22.02■■□□□ 1.12
RB1-202ENST00000467505 PLEKHG1Q9ULL1 1385 aa22.01■■□□□ 1.11
RB1-202ENST00000467505 ZFYVE9O95405 1425 aa22.01■■□□□ 1.11
RB1-202ENST00000467505 RIMS2Q9UQ26 1411 aa22.01■■□□□ 1.11
RB1-202ENST00000467505 PROSER2Q86WR7 435 aaPredicted RBP22.01■■□□□ 1.11
RB1-202ENST00000467505 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.01■■□□□ 1.11
RB1-202ENST00000467505 PHF23Q9BUL5 403 aaPredicted RBP22.01■■□□□ 1.11
RB1-202ENST00000467505 ITGAEP38570 1179 aa21.99■■□□□ 1.11
RB1-202ENST00000467505 SENP3Q9H4L4 574 aaPredicted RBP21.99■■□□□ 1.11
RB1-202ENST00000467505 NUP155O75694 1391 aa21.99■■□□□ 1.11
RB1-202ENST00000467505 CHGAP10645 457 aaKnown RBP21.98■■□□□ 1.11
RB1-202ENST00000467505 FAM135BQ49AJ0 1406 aa21.97■■□□□ 1.11
RB1-202ENST00000467505 CHD2O14647 1828 aaKnown RBP21.97■■□□□ 1.11
RB1-202ENST00000467505 MSH6P52701 1360 aa21.96■■□□□ 1.11
RB1-202ENST00000467505 DIP2AQ14689 1571 aa21.94■■□□□ 1.1
RB1-202ENST00000467505 TBX22Q9Y458 520 aa21.93■■□□□ 1.1
RB1-202ENST00000467505 ROBO1Q9Y6N7 1651 aa21.91■■□□□ 1.1
RB1-202ENST00000467505 PPARGC1BQ86YN6 1023 aaKnown RBP21.91■■□□□ 1.1
RB1-202ENST00000467505 SPHKAPQ2M3C7 1700 aa21.91■■□□□ 1.1
RB1-202ENST00000467505 PIK3R4Q99570 1358 aa21.89■■□□□ 1.1
RB1-202ENST00000467505 NCOA3Q9Y6Q9 1424 aa21.89■■□□□ 1.09
RB1-202ENST00000467505 RBM33Q96EV2 1170 aaKnown RBP21.88■■□□□ 1.09
RB1-202ENST00000467505 TRPM2O94759 1503 aa21.86■■□□□ 1.09
RB1-202ENST00000467505 RRBP1Q9P2E9 1410 aaKnown RBP21.86■■□□□ 1.09
RB1-202ENST00000467505 ADAMTS13Q76LX8 1427 aa21.85■■□□□ 1.09
RB1-202ENST00000467505 NUTM2DQ5VT03 806 aaPredicted RBP21.84■■□□□ 1.09
RB1-202ENST00000467505 C14orf37Q86TY3 774 aa21.84■■□□□ 1.09
RB1-202ENST00000467505 SLAIN2Q9P270 581 aa21.84■■□□□ 1.09
RB1-202ENST00000467505 PHLPP1O60346 1717 aa21.81■■□□□ 1.08
RB1-202ENST00000467505 ZNF326Q5BKZ1 582 aaKnown RBP21.79■■□□□ 1.08
RB1-202ENST00000467505 CADPS2Q86UW7 1296 aa21.79■■□□□ 1.08
RB1-202ENST00000467505 KIF1BO60333 1816 aa21.78■■□□□ 1.08
RB1-202ENST00000467505 SETBP1Q9Y6X0 1596 aa21.78■■□□□ 1.08
RB1-202ENST00000467505 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.77■■□□□ 1.08
RB1-202ENST00000467505 ATF3P18847 181 aa21.77■■□□□ 1.08
RB1-202ENST00000467505 C19orf44Q9H6X5 657 aa21.77■■□□□ 1.08
RB1-202ENST00000467505 NAIPQ13075 1403 aa21.77■■□□□ 1.08
RB1-202ENST00000467505 AMOTL2Q9Y2J4 779 aa21.75■■□□□ 1.07
RB1-202ENST00000467505 JCADQ9P266 1359 aa21.74■■□□□ 1.07
RB1-202ENST00000467505 CLTCL1P53675 1640 aa21.74■■□□□ 1.07
RB1-202ENST00000467505 NRXN3Q9Y4C0 1643 aa21.74■■□□□ 1.07
RB1-202ENST00000467505 XRN1Q8IZH2 1706 aaKnown RBP21.72■■□□□ 1.07
RB1-202ENST00000467505 HFM1A2PYH4 1435 aa21.72■■□□□ 1.07
RB1-202ENST00000467505 DCCP43146 1447 aa21.72■■□□□ 1.07
RB1-202ENST00000467505 COL16A1Q07092 1604 aaPredicted RBP21.71■■□□□ 1.07
RB1-202ENST00000467505 TRIM52Q96A61 297 aa21.71■■□□□ 1.07
RB1-202ENST00000467505 PTPRUQ92729 1446 aa21.71■■□□□ 1.07
RB1-202ENST00000467505 NEXMIFQ5QGS0 1516 aa21.7■■□□□ 1.06
RB1-202ENST00000467505 RGS17Q9UGC6 210 aaPredicted RBP21.69■■□□□ 1.06
RB1-202ENST00000467505 AHDC1Q5TGY3 1603 aaPredicted RBP21.68■■□□□ 1.06
RB1-202ENST00000467505 SPATA31A6Q5VVP1 1343 aa21.65■■□□□ 1.06
RB1-202ENST00000467505 SLC4A1APQ9BWU0 796 aaKnown RBP21.65■■□□□ 1.06
RB1-202ENST00000467505 VGFO15240 615 aaPredicted RBP21.64■■□□□ 1.05
RB1-202ENST00000467505 METP08581 1390 aa21.63■■□□□ 1.05
RB1-202ENST00000467505 SHPRHQ149N8 1683 aa21.63■■□□□ 1.05
RB1-202ENST00000467505 RPGRIP1LQ68CZ1 1315 aa21.62■■□□□ 1.05
RB1-202ENST00000467505 BRINP3Q76B58 766 aa21.6■■□□□ 1.05
RB1-202ENST00000467505 ADGRL3Q9HAR2 1447 aa21.6■■□□□ 1.05
RB1-202ENST00000467505 MEX3CQ5U5Q3 659 aaKnown RBP21.59■■□□□ 1.05
RB1-202ENST00000467505 POTEAQ6S8J7 498 aa21.59■■□□□ 1.05
RB1-202ENST00000467505 ASXL1Q8IXJ9 1541 aa21.59■■□□□ 1.05
RB1-202ENST00000467505 MST1RQ04912 1400 aa21.58■■□□□ 1.05
RB1-202ENST00000467505 PPLO60437 1756 aa21.58■■□□□ 1.04
RB1-202ENST00000467505 NALCNQ8IZF0 1738 aa21.58■■□□□ 1.04
RB1-202ENST00000467505 NHSL1Q5SYE7 1610 aa21.56■■□□□ 1.04
RB1-202ENST00000467505 SETD1AO15047 1707 aaKnown RBP21.56■■□□□ 1.04
RB1-202ENST00000467505 PTCH1Q13635 1447 aa21.55■■□□□ 1.04
RB1-202ENST00000467505 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
RB1-202ENST00000467505 ZNF772Q68DY9 489 aaPredicted RBP21.53■■□□□ 1.04
RB1-202ENST00000467505 LRP6O75581 1613 aa21.53■■□□□ 1.04
RB1-202ENST00000467505 SETD5Q9C0A6 1442 aa21.53■■□□□ 1.04
RB1-202ENST00000467505 CCDC144AA2RUR9 1427 aa21.52■■□□□ 1.04
RB1-202ENST00000467505 PRAG1Q86YV5 1406 aa21.52■■□□□ 1.04
RB1-202ENST00000467505 LRRC59Q96AG4 307 aaKnown RBP21.51■■□□□ 1.03
RB1-202ENST00000467505 ROBO2Q9HCK4 1378 aa21.47■■□□□ 1.03
RB1-202ENST00000467505 C1orf167Q5SNV9 1468 aa21.46■■□□□ 1.03
RB1-202ENST00000467505 NUTM2BA6NNL0 878 aaPredicted RBP21.46■■□□□ 1.03
RB1-202ENST00000467505 NUTM2EB1AL46 878 aaPredicted RBP21.46■■□□□ 1.03
RB1-202ENST00000467505 NUTM2AQ8IVF1 878 aaPredicted RBP21.46■■□□□ 1.03
RB1-202ENST00000467505 FOXD1Q16676 465 aa21.45■■□□□ 1.02
RB1-202ENST00000467505 MPHOSPH9Q99550 1183 aa21.45■■□□□ 1.02
RB1-202ENST00000467505 ANKRD30BQ9BXX2 1392 aa21.45■■□□□ 1.02
RB1-202ENST00000467505 IFT172Q9UG01 1749 aa21.44■■□□□ 1.02
RB1-202ENST00000467505 LAMC1P11047 1609 aa21.44■■□□□ 1.02
RB1-202ENST00000467505 SPATA31E1Q6ZUB1 1445 aa21.41■■□□□ 1.02
RB1-202ENST00000467505 RGL3Q3MIN7 710 aa21.41■■□□□ 1.02
RB1-202ENST00000467505 PNPLA6Q8IY17 1366 aa21.4■■□□□ 1.02
RB1-202ENST00000467505 CDC42BPGQ6DT37 1551 aa21.4■■□□□ 1.02
RB1-202ENST00000467505 RXRBP28702 533 aa21.39■■□□□ 1.01
RB1-202ENST00000467505 ADGRF5Q8IZF2 1346 aa21.38■■□□□ 1.01
RB1-202ENST00000467505 DDX17Q92841 729 aaKnown RBP21.38■■□□□ 1.01
RB1-202ENST00000467505 KNDC1Q76NI1 1749 aa21.38■■□□□ 1.01
RB1-202ENST00000467505 AFF2P51816 1311 aa21.37■■□□□ 1.01
RB1-202ENST00000467505 TECPR2O15040 1411 aa21.37■■□□□ 1.01
RB1-202ENST00000467505 SOS2Q07890 1332 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms