RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 FECHP22830 423 aa12.51□□□□□ -0.41
ATG3-204ENST00000467275 PXYLP1Q8TE99 480 aa12.51□□□□□ -0.41
ATG3-204ENST00000467275 MTRQ99707 1265 aa12.51□□□□□ -0.41
ATG3-204ENST00000467275 GPR37O15354 613 aa12.5□□□□□ -0.41
ATG3-204ENST00000467275 RGS20O76081 388 aa12.5□□□□□ -0.41
ATG3-204ENST00000467275 IL21Q9HBE4 155 aa12.5□□□□□ -0.41
ATG3-204ENST00000467275 PRR14Q9BWN1 585 aa12.49□□□□□ -0.41
ATG3-204ENST00000467275 METTL3Q86U44 580 aaKnown RBP12.48□□□□□ -0.41
ATG3-204ENST00000467275 COPS2P61201 443 aa12.45□□□□□ -0.42
ATG3-204ENST00000467275 ZNF516Q92618 1163 aa12.44□□□□□ -0.42
ATG3-204ENST00000467275 KMT5BQ4FZB7 885 aa12.43□□□□□ -0.42
ATG3-204ENST00000467275 PCDHB3Q9Y5E6 796 aa12.43□□□□□ -0.42
ATG3-204ENST00000467275 CFHP08603 1231 aa12.41□□□□□ -0.42
ATG3-204ENST00000467275 RSPH4AQ5TD94 716 aa12.4□□□□□ -0.42
ATG3-204ENST00000467275 SLC10A3P09131 477 aa12.39□□□□□ -0.43
ATG3-204ENST00000467275 ACTN4O43707 911 aaKnown RBP12.37□□□□□ -0.43
ATG3-204ENST00000467275 DAXXQ9UER7 740 aaPredicted RBP12.37□□□□□ -0.43
ATG3-204ENST00000467275 ZPR1O75312 459 aa12.36□□□□□ -0.43
ATG3-204ENST00000467275 BLOC1S3Q6QNY0 202 aa12.36□□□□□ -0.43
ATG3-204ENST00000467275 NKX2-3Q8TAU0 364 aa12.36□□□□□ -0.43
ATG3-204ENST00000467275 NLRP7Q8WX94 980 aa12.36□□□□□ -0.43
ATG3-204ENST00000467275 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
ATG3-204ENST00000467275 RDH13Q8NBN7 331 aa12.34□□□□□ -0.43
ATG3-204ENST00000467275 MAP2K5Q13163 448 aa12.33□□□□□ -0.44
ATG3-204ENST00000467275 PHOX2BQ99453 314 aa12.33□□□□□ -0.44
ATG3-204ENST00000467275 DDX11L8A8MPP1 907 aa12.32□□□□□ -0.44
ATG3-204ENST00000467275 GGCXP38435 758 aa12.32□□□□□ -0.44
ATG3-204ENST00000467275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.32□□□□□ -0.44
ATG3-204ENST00000467275 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.32□□□□□ -0.44
ATG3-204ENST00000467275 IRX2Q9BZI1 471 aaPredicted RBP12.31□□□□□ -0.44
ATG3-204ENST00000467275 SULF1Q8IWU6 871 aa12.3□□□□□ -0.44
ATG3-204ENST00000467275 IRF6O14896 467 aa12.28□□□□□ -0.44
ATG3-204ENST00000467275 NR1I2O75469 434 aa12.28□□□□□ -0.44
ATG3-204ENST00000467275 MINK1Q8N4C8 1332 aaPredicted RBP12.28□□□□□ -0.44
ATG3-204ENST00000467275 LMOD2Q6P5Q4 547 aa12.27□□□□□ -0.45
ATG3-204ENST00000467275 TLL1O43897 1013 aa12.26□□□□□ -0.45
ATG3-204ENST00000467275 PUS10Q3MIT2 529 aaKnown RBP12.25□□□□□ -0.45
ATG3-204ENST00000467275 PRKD2Q9BZL6 878 aa12.25□□□□□ -0.45
ATG3-204ENST00000467275 TMUB1Q9BVT8 246 aa12.24□□□□□ -0.45
ATG3-204ENST00000467275 GCGRP47871 477 aa12.22□□□□□ -0.45
ATG3-204ENST00000467275 SCUBE3Q8IX30 993 aa12.22□□□□□ -0.45
ATG3-204ENST00000467275 CCDC102AQ96A19 550 aa12.22□□□□□ -0.45
ATG3-204ENST00000467275 MDM2Q00987 491 aaPredicted RBP12.21□□□□□ -0.45
ATG3-204ENST00000467275 FUT2Q10981 343 aa12.21□□□□□ -0.45
ATG3-204ENST00000467275 ADH1BP00325 375 aa12.2□□□□□ -0.46
ATG3-204ENST00000467275 ATP6V1AP38606 617 aa12.2□□□□□ -0.46
ATG3-204ENST00000467275 KRI1Q8N9T8 703 aaKnown RBP12.2□□□□□ -0.46
ATG3-204ENST00000467275 V9GY48 417 aaPredicted RBP12.2□□□□□ -0.46
ATG3-204ENST00000467275 RNF223E7ERA6 249 aa12.18□□□□□ -0.46
ATG3-204ENST00000467275 S1PR4O95977 384 aa12.18□□□□□ -0.46
ATG3-204ENST00000467275 MORN1Q5T089 497 aa12.17□□□□□ -0.46
ATG3-204ENST00000467275 SPSB2Q99619 263 aa12.16□□□□□ -0.46
ATG3-204ENST00000467275 SLC6A16Q9GZN6 736 aa12.16□□□□□ -0.46
ATG3-204ENST00000467275 CD46P15529 392 aa12.15□□□□□ -0.46
ATG3-204ENST00000467275 GRIPAP1Q4V328 841 aa12.15□□□□□ -0.46
ATG3-204ENST00000467275 PPEF1O14829 653 aaPredicted RBP12.13□□□□□ -0.47
ATG3-204ENST00000467275 CLCN1P35523 988 aa12.13□□□□□ -0.47
ATG3-204ENST00000467275 ANKLE1Q8NAG6 615 aa12.13□□□□□ -0.47
ATG3-204ENST00000467275 ZC3H15Q8WU90 426 aaKnown RBP12.13□□□□□ -0.47
ATG3-204ENST00000467275 GPCPD1Q9NPB8 672 aa12.13□□□□□ -0.47
ATG3-204ENST00000467275 SLC27A5Q9Y2P5 690 aa12.13□□□□□ -0.47
ATG3-204ENST00000467275 ZMYND10O75800 440 aa12.12□□□□□ -0.47
ATG3-204ENST00000467275 BARGINQ6ZT62 677 aa12.12□□□□□ -0.47
ATG3-204ENST00000467275 GFRA3O60609 400 aa12.11□□□□□ -0.47
ATG3-204ENST00000467275 FMNL1O95466 1100 aaPredicted RBP12.11□□□□□ -0.47
ATG3-204ENST00000467275 LAPTM4AQ15012 233 aa12.11□□□□□ -0.47
ATG3-204ENST00000467275 SLC19A1P41440 591 aa12.1□□□□□ -0.47
ATG3-204ENST00000467275 Q6ZNB5 142 aa12.1□□□□□ -0.47
ATG3-204ENST00000467275 KDM4AO75164 1064 aa12.09□□□□□ -0.47
ATG3-204ENST00000467275 THAP11Q96EK4 314 aa12.08□□□□□ -0.48
ATG3-204ENST00000467275 FAM217BQ9NTX9 383 aaPredicted RBP12.07□□□□□ -0.48
ATG3-204ENST00000467275 SALL2Q9Y467 1007 aaPredicted RBP12.07□□□□□ -0.48
ATG3-204ENST00000467275 Q3C1V9 767 aa12.05□□□□□ -0.48
ATG3-204ENST00000467275 BRICD5Q6PL45 260 aa12.05□□□□□ -0.48
ATG3-204ENST00000467275 USP46P62068 366 aa12.04□□□□□ -0.48
ATG3-204ENST00000467275 TTLL12Q14166 644 aaPredicted RBP12.04□□□□□ -0.48
ATG3-204ENST00000467275 RNF19BQ6ZMZ0 732 aa12.04□□□□□ -0.48
ATG3-204ENST00000467275 EMID1Q96A84 441 aaPredicted RBP12.04□□□□□ -0.48
ATG3-204ENST00000467275 PDZRN3Q9UPQ7 1066 aa12.04□□□□□ -0.48
ATG3-204ENST00000467275 SPRYD7Q5W111 196 aa12.03□□□□□ -0.48
ATG3-204ENST00000467275 LIAT1Q6ZQX7 453 aa12.03□□□□□ -0.48
ATG3-204ENST00000467275 FAM160A2Q8N612 972 aaPredicted RBP12.03□□□□□ -0.48
ATG3-204ENST00000467275 NRG2O14511 850 aaPredicted RBP12.02□□□□□ -0.49
ATG3-204ENST00000467275 NUTM1Q86Y26 1132 aa12.02□□□□□ -0.49
ATG3-204ENST00000467275 REPIN1Q9BWE0 567 aaKnown RBP12.02□□□□□ -0.49
ATG3-204ENST00000467275 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
ATG3-204ENST00000467275 SSTR3P32745 418 aaPredicted RBP12□□□□□ -0.49
ATG3-204ENST00000467275 PLA2G2CQ5R387 149 aa12□□□□□ -0.49
ATG3-204ENST00000467275 FCF1Q9Y324 198 aaKnown RBP12□□□□□ -0.49
ATG3-204ENST00000467275 HOXA2O43364 376 aa11.99□□□□□ -0.49
ATG3-204ENST00000467275 AMHR2Q16671 573 aa11.99□□□□□ -0.49
ATG3-204ENST00000467275 HLA-CQ95604 372 aa11.99□□□□□ -0.49
ATG3-204ENST00000467275 PRDM9Q9NQV7 894 aa11.99□□□□□ -0.49
ATG3-204ENST00000467275 MSS51Q4VC12 460 aa11.98□□□□□ -0.49
ATG3-204ENST00000467275 ZNF697Q5TEC3 545 aa11.98□□□□□ -0.49
ATG3-204ENST00000467275 GIGYF2Q6Y7W6 1299 aaKnown RBP11.96□□□□□ -0.49
ATG3-204ENST00000467275 AK7Q96M32 723 aa11.96□□□□□ -0.49
ATG3-204ENST00000467275 USB1Q9BQ65 265 aaKnown RBP11.96□□□□□ -0.49
ATG3-204ENST00000467275 GUCA2AQ02747 115 aa11.95□□□□□ -0.5
ATG3-204ENST00000467275 TRIM67Q6ZTA4 783 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms