RNA–Protein interactions for RNA: ENST00000467259.1

GABBR1-207, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 2

Gene GABBR1, Length 1,252 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-207ENST00000467259 HFM1A2PYH4 1435 aa36.25■■■■□ 3.39
GABBR1-207ENST00000467259 SLC26A8Q96RN1 970 aa36.24■■■■□ 3.39
GABBR1-207ENST00000467259 SCAF1Q9H7N4 1312 aaKnown RBP36.23■■■■□ 3.39
GABBR1-207ENST00000467259 PIP4K2BP78356 416 aa36.22■■■■□ 3.39
GABBR1-207ENST00000467259 TOM1O60784 492 aa36.18■■■■□ 3.38
GABBR1-207ENST00000467259 BCANQ96GW7 911 aa36.18■■■■□ 3.38
GABBR1-207ENST00000467259 PPP1R15AO75807 674 aaPredicted RBP36.17■■■■□ 3.38
GABBR1-207ENST00000467259 PLEKHG1Q9ULL1 1385 aa36.15■■■■□ 3.38
GABBR1-207ENST00000467259 NUTM2DQ5VT03 806 aaPredicted RBP36.15■■■■□ 3.38
GABBR1-207ENST00000467259 CLTCL1P53675 1640 aa36.15■■■■□ 3.38
GABBR1-207ENST00000467259 NWD1Q149M9 1564 aa36.14■■■■□ 3.38
GABBR1-207ENST00000467259 TRIM52Q96A61 297 aa36.11■■■■□ 3.37
GABBR1-207ENST00000467259 CHD2O14647 1828 aaKnown RBP36.11■■■■□ 3.37
GABBR1-207ENST00000467259 TRPM2O94759 1503 aa36.1■■■■□ 3.37
GABBR1-207ENST00000467259 KCNA6P17658 529 aa36.08■■■■□ 3.37
GABBR1-207ENST00000467259 KIF1BO60333 1816 aa36.06■■■■□ 3.36
GABBR1-207ENST00000467259 HDGFP51858 240 aaKnown RBP36.06■■■■□ 3.36
GABBR1-207ENST00000467259 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.05■■■■□ 3.36
GABBR1-207ENST00000467259 TMEM94Q12767 1356 aa36.04■■■■□ 3.36
GABBR1-207ENST00000467259 HSPA1LP34931 641 aa36.04■■■■□ 3.36
GABBR1-207ENST00000467259 NKTRP30414 1462 aaKnown RBP36.04■■■■□ 3.36
GABBR1-207ENST00000467259 RBM33Q96EV2 1170 aaKnown RBP36.03■■■■□ 3.36
GABBR1-207ENST00000467259 ADAMTS13Q76LX8 1427 aa36.02■■■■□ 3.36
GABBR1-207ENST00000467259 DIP2AQ14689 1571 aa36■■■■□ 3.35
GABBR1-207ENST00000467259 DISP3Q9P2K9 1392 aa36■■■■□ 3.35
GABBR1-207ENST00000467259 NRXN3Q9Y4C0 1643 aa35.98■■■■□ 3.35
GABBR1-207ENST00000467259 PROSER2Q86WR7 435 aaPredicted RBP35.98■■■■□ 3.35
GABBR1-207ENST00000467259 ZNF326Q5BKZ1 582 aaKnown RBP35.97■■■■□ 3.35
GABBR1-207ENST00000467259 SLC4A1APQ9BWU0 796 aaKnown RBP35.97■■■■□ 3.35
GABBR1-207ENST00000467259 NEXMIFQ5QGS0 1516 aa35.94■■■■□ 3.34
GABBR1-207ENST00000467259 TBX22Q9Y458 520 aa35.94■■■■□ 3.34
GABBR1-207ENST00000467259 SETBP1Q9Y6X0 1596 aa35.89■■■■□ 3.34
GABBR1-207ENST00000467259 FOXD1Q16676 465 aa35.89■■■■□ 3.34
GABBR1-207ENST00000467259 PTPRUQ92729 1446 aa35.83■■■■□ 3.33
GABBR1-207ENST00000467259 ROBO1Q9Y6N7 1651 aa35.82■■■■□ 3.33
GABBR1-207ENST00000467259 PIK3R4Q99570 1358 aa35.82■■■■□ 3.32
GABBR1-207ENST00000467259 MSH6P52701 1360 aa35.81■■■■□ 3.32
GABBR1-207ENST00000467259 XRN1Q8IZH2 1706 aaKnown RBP35.81■■■■□ 3.32
GABBR1-207ENST00000467259 PPLO60437 1756 aa35.8■■■■□ 3.32
GABBR1-207ENST00000467259 MED1Q15648 1581 aaPredicted RBP35.8■■■■□ 3.32
GABBR1-207ENST00000467259 SETD5Q9C0A6 1442 aa35.77■■■■□ 3.32
GABBR1-207ENST00000467259 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.75■■■■□ 3.31
GABBR1-207ENST00000467259 MPHOSPH9Q99550 1183 aa35.75■■■■□ 3.31
GABBR1-207ENST00000467259 ILDR2Q71H61 639 aa35.74■■■■□ 3.31
GABBR1-207ENST00000467259 AMOTL2Q9Y2J4 779 aa35.74■■■■□ 3.31
GABBR1-207ENST00000467259 METP08581 1390 aa35.74■■■■□ 3.31
GABBR1-207ENST00000467259 SETD1AO15047 1707 aaKnown RBP35.74■■■■□ 3.31
GABBR1-207ENST00000467259 FAM135BQ49AJ0 1406 aa35.74■■■■□ 3.31
GABBR1-207ENST00000467259 C14orf37Q86TY3 774 aa35.71■■■■□ 3.31
GABBR1-207ENST00000467259 CCDC144AA2RUR9 1427 aa35.69■■■■□ 3.3
GABBR1-207ENST00000467259 RAB3GAP2Q9H2M9 1393 aa35.68■■■■□ 3.3
GABBR1-207ENST00000467259 NCOA3Q9Y6Q9 1424 aa35.67■■■■□ 3.3
GABBR1-207ENST00000467259 IFT172Q9UG01 1749 aa35.65■■■■□ 3.3
GABBR1-207ENST00000467259 SLAIN2Q9P270 581 aa35.63■■■■□ 3.29
GABBR1-207ENST00000467259 PHLPP1O60346 1717 aa35.62■■■■□ 3.29
GABBR1-207ENST00000467259 RPGRIP1LQ68CZ1 1315 aa35.61■■■■□ 3.29
GABBR1-207ENST00000467259 VGFO15240 615 aaPredicted RBP35.61■■■■□ 3.29
GABBR1-207ENST00000467259 SPATA31E1Q6ZUB1 1445 aa35.6■■■■□ 3.29
GABBR1-207ENST00000467259 NALCNQ8IZF0 1738 aa35.58■■■■□ 3.29
GABBR1-207ENST00000467259 C19orf44Q9H6X5 657 aa35.57■■■■□ 3.28
GABBR1-207ENST00000467259 RGL3Q3MIN7 710 aa35.56■■■■□ 3.28
GABBR1-207ENST00000467259 ATF3P18847 181 aa35.54■■■■□ 3.28
GABBR1-207ENST00000467259 CADPS2Q86UW7 1296 aa35.52■■■■□ 3.28
GABBR1-207ENST00000467259 ACIN1Q9UKV3 1341 aaKnown RBP35.51■■■■□ 3.27
GABBR1-207ENST00000467259 ADGRF5Q8IZF2 1346 aa35.5■■■■□ 3.27
GABBR1-207ENST00000467259 COL16A1Q07092 1604 aaPredicted RBP35.49■■■■□ 3.27
GABBR1-207ENST00000467259 DCCP43146 1447 aa35.49■■■■□ 3.27
GABBR1-207ENST00000467259 ADGRL3Q9HAR2 1447 aa35.48■■■■□ 3.27
GABBR1-207ENST00000467259 PTCH1Q13635 1447 aa35.47■■■■□ 3.27
GABBR1-207ENST00000467259 ROBO2Q9HCK4 1378 aa35.45■■■■□ 3.27
GABBR1-207ENST00000467259 PHF23Q9BUL5 403 aaPredicted RBP35.44■■■■□ 3.26
GABBR1-207ENST00000467259 AHDC1Q5TGY3 1603 aaPredicted RBP35.43■■■■□ 3.26
GABBR1-207ENST00000467259 MST1RQ04912 1400 aa35.42■■■■□ 3.26
GABBR1-207ENST00000467259 ANKRD30BQ9BXX2 1392 aa35.42■■■■□ 3.26
GABBR1-207ENST00000467259 ASXL1Q8IXJ9 1541 aa35.41■■■■□ 3.26
GABBR1-207ENST00000467259 PRAG1Q86YV5 1406 aa35.4■■■■□ 3.26
GABBR1-207ENST00000467259 PIK3C2GO75747 1445 aa35.38■■■■□ 3.25
GABBR1-207ENST00000467259 BRINP3Q76B58 766 aa35.37■■■■□ 3.25
GABBR1-207ENST00000467259 NHSL1Q5SYE7 1610 aa35.35■■■■□ 3.25
GABBR1-207ENST00000467259 KNDC1Q76NI1 1749 aa35.33■■■■□ 3.25
GABBR1-207ENST00000467259 SOCS7O14512 581 aa35.32■■■■□ 3.24
GABBR1-207ENST00000467259 JCADQ9P266 1359 aa35.32■■■■□ 3.24
GABBR1-207ENST00000467259 SHPRHQ149N8 1683 aa35.3■■■■□ 3.24
GABBR1-207ENST00000467259 MYOM2P54296 1465 aa35.29■■■■□ 3.24
GABBR1-207ENST00000467259 STK26Q9P289 416 aa35.29■■■■□ 3.24
GABBR1-207ENST00000467259 NRXN1Q9ULB1 1477 aa35.29■■■■□ 3.24
GABBR1-207ENST00000467259 TMEM132EQ6IEE7 984 aa35.28■■■■□ 3.24
GABBR1-207ENST00000467259 HRCP23327 699 aa35.26■■■■□ 3.24
GABBR1-207ENST00000467259 LAMC1P11047 1609 aa35.25■■■■□ 3.23
GABBR1-207ENST00000467259 C1orf167Q5SNV9 1468 aa35.25■■■■□ 3.23
GABBR1-207ENST00000467259 RGS17Q9UGC6 210 aaPredicted RBP35.25■■■■□ 3.23
GABBR1-207ENST00000467259 LRPPRCP42704 1394 aaKnown RBP35.25■■■■□ 3.23
GABBR1-207ENST00000467259 TECPR2O15040 1411 aa35.24■■■■□ 3.23
GABBR1-207ENST00000467259 CDC42BPGQ6DT37 1551 aa35.22■■■■□ 3.23
GABBR1-207ENST00000467259 DDX17Q92841 729 aaKnown RBP35.22■■■■□ 3.23
GABBR1-207ENST00000467259 LRP6O75581 1613 aa35.21■■■■□ 3.23
GABBR1-207ENST00000467259 YTHDC2Q9H6S0 1430 aaKnown RBP35.21■■■■□ 3.23
GABBR1-207ENST00000467259 PLEKHH1Q9ULM0 1364 aa35.2■■■■□ 3.23
GABBR1-207ENST00000467259 WAPLQ7Z5K2 1190 aa35.19■■■■□ 3.22
GABBR1-207ENST00000467259 CFAP70Q5T0N1 1121 aa35.18■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms