RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 SCAPERQ9BY12 1400 aa20.25■□□□□ 0.83
CHD1L-205ENST00000467213 NEURL4Q96JN8 1562 aa20.24■□□□□ 0.83
CHD1L-205ENST00000467213 JPH4Q96JJ6 628 aa20.24■□□□□ 0.83
CHD1L-205ENST00000467213 ADAMTS8Q9UP79 889 aa20.24■□□□□ 0.83
CHD1L-205ENST00000467213 CDCA8Q53HL2 280 aa20.23■□□□□ 0.83
CHD1L-205ENST00000467213 SPHKAPQ2M3C7 1700 aa20.23■□□□□ 0.83
CHD1L-205ENST00000467213 SLFN5Q08AF3 891 aa20.23■□□□□ 0.83
CHD1L-205ENST00000467213 CC2D1BQ5T0F9 858 aaKnown RBP20.23■□□□□ 0.83
CHD1L-205ENST00000467213 C20orf194Q5TEA3 1177 aa20.23■□□□□ 0.83
CHD1L-205ENST00000467213 NKTRP30414 1462 aaKnown RBP20.22■□□□□ 0.83
CHD1L-205ENST00000467213 MYOM1P52179 1685 aa20.22■□□□□ 0.83
CHD1L-205ENST00000467213 FRAT1Q92837 279 aaPredicted RBP20.22■□□□□ 0.83
CHD1L-205ENST00000467213 PPP2R1AP30153 589 aa20.22■□□□□ 0.83
CHD1L-205ENST00000467213 AAMPQ13685 434 aa20.21■□□□□ 0.83
CHD1L-205ENST00000467213 FAM43AQ8N2R8 423 aa20.2■□□□□ 0.82
CHD1L-205ENST00000467213 WDR43Q15061 677 aaKnown RBP eCLIP20.19■□□□□ 0.82
CHD1L-205ENST00000467213 AMER1Q5JTC6 1135 aaPredicted RBP20.19■□□□□ 0.82
CHD1L-205ENST00000467213 HNRNPMP52272 730 aaKnown RBP eCLIP20.19■□□□□ 0.823e-7■■□□□ 12.7
CHD1L-205ENST00000467213 CEP152O94986 1710 aa20.19■□□□□ 0.82
CHD1L-205ENST00000467213 SYCP2Q9BX26 1530 aa20.18■□□□□ 0.82
CHD1L-205ENST00000467213 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
CHD1L-205ENST00000467213 CHMP7Q8WUX9 453 aaPredicted RBP20.17■□□□□ 0.82
CHD1L-205ENST00000467213 BRPF3Q9ULD4 1205 aa20.17■□□□□ 0.82
CHD1L-205ENST00000467213 MAPK8IP3Q9UPT6 1336 aa20.17■□□□□ 0.82
CHD1L-205ENST00000467213 SCAF11Q99590 1463 aaKnown RBP20.16■□□□□ 0.82
CHD1L-205ENST00000467213 KNSTRNQ9Y448 316 aa20.16■□□□□ 0.82
CHD1L-205ENST00000467213 TTC37Q6PGP7 1564 aa20.16■□□□□ 0.82
CHD1L-205ENST00000467213 PDE3AQ14432 1141 aa20.16■□□□□ 0.82
CHD1L-205ENST00000467213 KDM5AP29375 1690 aaKnown RBP20.15■□□□□ 0.82
CHD1L-205ENST00000467213 ERCC6Q03468 1493 aa20.15■□□□□ 0.82
CHD1L-205ENST00000467213 CGNL1Q0VF96 1302 aa20.15■□□□□ 0.82
CHD1L-205ENST00000467213 TRPM2O94759 1503 aa20.14■□□□□ 0.82
CHD1L-205ENST00000467213 RSPH6AQ9H0K4 717 aa20.13■□□□□ 0.81
CHD1L-205ENST00000467213 RTN4Q9NQC3 1192 aaKnown RBP20.13■□□□□ 0.81
CHD1L-205ENST00000467213 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
CHD1L-205ENST00000467213 E9PSI1 815 aa20.12■□□□□ 0.81
CHD1L-205ENST00000467213 USP19O94966 1318 aa20.11■□□□□ 0.81
CHD1L-205ENST00000467213 SKAP1Q86WV1 359 aa20.11■□□□□ 0.81
CHD1L-205ENST00000467213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.1■□□□□ 0.81
CHD1L-205ENST00000467213 NLRP1Q9C000 1473 aa20.1■□□□□ 0.81
CHD1L-205ENST00000467213 BECN1Q14457 450 aa20.09■□□□□ 0.81
CHD1L-205ENST00000467213 UBE2Q2Q8WVN8 375 aa20.09■□□□□ 0.81
CHD1L-205ENST00000467213 ARHGAP5Q13017 1502 aa20.09■□□□□ 0.81
CHD1L-205ENST00000467213 FRAT2O75474 233 aaPredicted RBP20.09■□□□□ 0.81
CHD1L-205ENST00000467213 PTPRTO14522 1441 aa20.09■□□□□ 0.81
CHD1L-205ENST00000467213 RGL3Q3MIN7 710 aa20.08■□□□□ 0.81
CHD1L-205ENST00000467213 SLC4A3P48751 1232 aa20.07■□□□□ 0.8
CHD1L-205ENST00000467213 DEPDC5O75140 1603 aa20.07■□□□□ 0.8
CHD1L-205ENST00000467213 SHROOM2Q13796 1616 aa20.07■□□□□ 0.8
CHD1L-205ENST00000467213 NCBP3Q53F19 620 aaKnown RBP20.06■□□□□ 0.8
CHD1L-205ENST00000467213 MYO3AQ8NEV4 1616 aa20.05■□□□□ 0.8
CHD1L-205ENST00000467213 L1TD1Q5T7N2 865 aaKnown RBP20.05■□□□□ 0.8
CHD1L-205ENST00000467213 POLR3AO14802 1390 aaPredicted RBP20.02■□□□□ 0.8
CHD1L-205ENST00000467213 TET3O43151 1660 aa20.02■□□□□ 0.8
CHD1L-205ENST00000467213 CLUAP1Q96AJ1 413 aa20■□□□□ 0.79
CHD1L-205ENST00000467213 MYOM2P54296 1465 aa20■□□□□ 0.79
CHD1L-205ENST00000467213 ANTXR1Q9H6X2 564 aa20■□□□□ 0.79
CHD1L-205ENST00000467213 RTEL1-TNFRSF6BF6WH68 1400 aa20■□□□□ 0.79
CHD1L-205ENST00000467213 SBNO2Q9Y2G9 1366 aa20■□□□□ 0.79
CHD1L-205ENST00000467213 RGS3P49796 1198 aa19.99■□□□□ 0.79
CHD1L-205ENST00000467213 PMFBP1Q8TBY8 1022 aa19.99■□□□□ 0.79
CHD1L-205ENST00000467213 CLTCL1P53675 1640 aa19.99■□□□□ 0.79
CHD1L-205ENST00000467213 KANK1Q14678 1352 aa19.99■□□□□ 0.79
CHD1L-205ENST00000467213 ABCC1P33527 1531 aa19.98■□□□□ 0.79
CHD1L-205ENST00000467213 VWDEQ8N2E2 1590 aa19.98■□□□□ 0.79
CHD1L-205ENST00000467213 ARAP3Q8WWN8 1544 aa19.98■□□□□ 0.79
CHD1L-205ENST00000467213 SHPRHQ149N8 1683 aa19.98■□□□□ 0.79
CHD1L-205ENST00000467213 USP32Q8NFA0 1604 aa19.98■□□□□ 0.79
CHD1L-205ENST00000467213 IGHDP01880 384 aa19.97■□□□□ 0.79
CHD1L-205ENST00000467213 CENPJQ9HC77 1338 aaPredicted RBP19.96■□□□□ 0.79
CHD1L-205ENST00000467213 IFT172Q9UG01 1749 aa19.95■□□□□ 0.79
CHD1L-205ENST00000467213 PLCH2O75038 1416 aa19.95■□□□□ 0.78
CHD1L-205ENST00000467213 MAP3K4Q9Y6R4 1608 aa19.95■□□□□ 0.78
CHD1L-205ENST00000467213 SPINK5Q9NQ38 1064 aaPredicted RBP19.95■□□□□ 0.78
CHD1L-205ENST00000467213 IQSEC2Q5JU85 1478 aa19.95■□□□□ 0.78
CHD1L-205ENST00000467213 ERVK-7P63135 1459 aa19.95■□□□□ 0.78
CHD1L-205ENST00000467213 APAF1O14727 1248 aa19.95■□□□□ 0.78
CHD1L-205ENST00000467213 BCAR3O75815 825 aa19.94■□□□□ 0.78
CHD1L-205ENST00000467213 TBC1D32Q96NH3 1257 aa19.94■□□□□ 0.78
CHD1L-205ENST00000467213 PHF23Q9BUL5 403 aaPredicted RBP19.94■□□□□ 0.78
CHD1L-205ENST00000467213 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.93■□□□□ 0.78
CHD1L-205ENST00000467213 UPF2Q9HAU5 1272 aaKnown RBP19.93■□□□□ 0.78
CHD1L-205ENST00000467213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.781e-8■■□□□ 13.5
CHD1L-205ENST00000467213 SETBP1Q9Y6X0 1596 aa19.91■□□□□ 0.78
CHD1L-205ENST00000467213 CCDC27Q2M243 656 aa19.9■□□□□ 0.78
CHD1L-205ENST00000467213 NRXN1Q9ULB1 1477 aa19.9■□□□□ 0.78
CHD1L-205ENST00000467213 FSD2A1L4K1 749 aa19.89■□□□□ 0.78
CHD1L-205ENST00000467213 WDR63Q8IWG1 891 aa19.89■□□□□ 0.78
CHD1L-205ENST00000467213 WWC1Q8IX03 1113 aa19.89■□□□□ 0.78
CHD1L-205ENST00000467213 ABCA6Q8N139 1617 aa19.89■□□□□ 0.77
CHD1L-205ENST00000467213 ISY1Q9ULR0 285 aaKnown RBP19.89■□□□□ 0.77
CHD1L-205ENST00000467213 ADGRL1O94910 1474 aa19.89■□□□□ 0.77
CHD1L-205ENST00000467213 POGKQ9P215 609 aa19.88■□□□□ 0.77
CHD1L-205ENST00000467213 ZFYVE16Q7Z3T8 1539 aa19.88■□□□□ 0.77
CHD1L-205ENST00000467213 ZC3H13Q5T200 1668 aaKnown RBP19.87■□□□□ 0.77
CHD1L-205ENST00000467213 SEC24BO95487 1268 aa19.87■□□□□ 0.77
CHD1L-205ENST00000467213 CCDC146Q8IYE0 955 aa19.86■□□□□ 0.77
CHD1L-205ENST00000467213 KIF1BO60333 1816 aa19.86■□□□□ 0.77
CHD1L-205ENST00000467213 CT47B1P0C2W7 299 aaPredicted RBP19.85■□□□□ 0.77
CHD1L-205ENST00000467213 RARSP54136 660 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms