RNA–Protein interactions for RNA: ENST00000466923.5

KPNA1-204, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 3,316 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-204ENST00000466923 HIRIP3Q9BW71 556 aaPredicted RBP7.1□□□□□ -1.27
KPNA1-204ENST00000466923 TET3O43151 1660 aa7.1□□□□□ -1.27
KPNA1-204ENST00000466923 SETD1BQ9UPS6 1966 aaKnown RBP7.1□□□□□ -1.27
KPNA1-204ENST00000466923 LMTK2Q8IWU2 1503 aa7.1□□□□□ -1.27
KPNA1-204ENST00000466923 PTPRTO14522 1441 aa7.1□□□□□ -1.27
KPNA1-204ENST00000466923 CFAP70Q5T0N1 1121 aa7.09□□□□□ -1.27
KPNA1-204ENST00000466923 ZC3H13Q5T200 1668 aaKnown RBP7.09□□□□□ -1.27
KPNA1-204ENST00000466923 SAFB2Q14151 953 aaKnown RBP eCLIP7.09□□□□□ -1.27
KPNA1-204ENST00000466923 SYNMO15061 1565 aa7.09□□□□□ -1.27
KPNA1-204ENST00000466923 RPRD2Q5VT52 1461 aaKnown RBP7.09□□□□□ -1.27
KPNA1-204ENST00000466923 NBPF1Q3BBV0 1214 aa7.09□□□□□ -1.28
KPNA1-204ENST00000466923 NBPF8Q3BBV2 869 aa7.08□□□□□ -1.28
KPNA1-204ENST00000466923 PREX1Q8TCU6 1659 aa7.08□□□□□ -1.28
KPNA1-204ENST00000466923 VGFO15240 615 aaPredicted RBP7.08□□□□□ -1.28
KPNA1-204ENST00000466923 TMEM2Q9UHN6 1383 aa7.08□□□□□ -1.28
KPNA1-204ENST00000466923 SPATA31D1Q6ZQQ2 1576 aa7.07□□□□□ -1.28
KPNA1-204ENST00000466923 CLTCL1P53675 1640 aa7.07□□□□□ -1.28
KPNA1-204ENST00000466923 HDGFP51858 240 aaKnown RBP7.07□□□□□ -1.28
KPNA1-204ENST00000466923 PLCB2Q00722 1185 aa7.07□□□□□ -1.28
KPNA1-204ENST00000466923 A2ML1A8K2U0 1454 aa7.07□□□□□ -1.28
KPNA1-204ENST00000466923 LMTK3Q96Q04 1460 aa7.06□□□□□ -1.28
KPNA1-204ENST00000466923 PIK3C2BO00750 1634 aa7.06□□□□□ -1.28
KPNA1-204ENST00000466923 RIMS2Q9UQ26 1411 aa7.06□□□□□ -1.28
KPNA1-204ENST00000466923 KDM5AP29375 1690 aaKnown RBP7.06□□□□□ -1.28
KPNA1-204ENST00000466923 TRAK1Q9UPV9 953 aa7.06□□□□□ -1.28
KPNA1-204ENST00000466923 TRPM2O94759 1503 aa7.05□□□□□ -1.28
KPNA1-204ENST00000466923 SPHKAPQ2M3C7 1700 aa7.05□□□□□ -1.28
KPNA1-204ENST00000466923 SPATA31E1Q6ZUB1 1445 aa7.05□□□□□ -1.28
KPNA1-204ENST00000466923 NLRP1Q9C000 1473 aa7.05□□□□□ -1.28
KPNA1-204ENST00000466923 FKBP8Q14318 412 aa7.05□□□□□ -1.28
KPNA1-204ENST00000466923 CEP170BQ9Y4F5 1589 aaPredicted RBP7.05□□□□□ -1.28
KPNA1-204ENST00000466923 MROH2AA6NES4 1674 aa7.05□□□□□ -1.28
KPNA1-204ENST00000466923 NUTM2FA1L443 756 aa7.04□□□□□ -1.28
KPNA1-204ENST00000466923 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.04□□□□□ -1.28
KPNA1-204ENST00000466923 ZNF335Q9H4Z2 1342 aaPredicted RBP7.04□□□□□ -1.28
KPNA1-204ENST00000466923 MYO5BQ9ULV0 1848 aa7.04□□□□□ -1.28
KPNA1-204ENST00000466923 WAPLQ7Z5K2 1190 aa7.04□□□□□ -1.28
KPNA1-204ENST00000466923 C14orf37Q86TY3 774 aa7.03□□□□□ -1.28
KPNA1-204ENST00000466923 MYO3AQ8NEV4 1616 aa7.03□□□□□ -1.28
KPNA1-204ENST00000466923 AMOTL2Q9Y2J4 779 aa7.03□□□□□ -1.28
KPNA1-204ENST00000466923 KCNA6P17658 529 aa7.02□□□□□ -1.28
KPNA1-204ENST00000466923 POLR3GLQ9BT43 218 aa7.02□□□□□ -1.28
KPNA1-204ENST00000466923 CARD11Q9BXL7 1154 aa7.02□□□□□ -1.28
KPNA1-204ENST00000466923 METP08581 1390 aa7.02□□□□□ -1.29
KPNA1-204ENST00000466923 TMEM131LA2VDJ0 1609 aa7.02□□□□□ -1.29
KPNA1-204ENST00000466923 RPGRIP1LQ68CZ1 1315 aa7.02□□□□□ -1.29
KPNA1-204ENST00000466923 CLSPNQ9HAW4 1339 aa7.02□□□□□ -1.29
KPNA1-204ENST00000466923 C14orf93Q9H972 538 aaKnown RBP7.01□□□□□ -1.29
KPNA1-204ENST00000466923 SCAF11Q99590 1463 aaKnown RBP7.01□□□□□ -1.29
KPNA1-204ENST00000466923 KIF1BO60333 1816 aa7.01□□□□□ -1.29
KPNA1-204ENST00000466923 UBR1Q8IWV7 1749 aa7.01□□□□□ -1.29
KPNA1-204ENST00000466923 ZFYVE9O95405 1425 aa7.01□□□□□ -1.29
KPNA1-204ENST00000466923 PROSER2Q86WR7 435 aaPredicted RBP7.01□□□□□ -1.29
KPNA1-204ENST00000466923 ADGRB3O60242 1522 aa7.01□□□□□ -1.29
KPNA1-204ENST00000466923 NPHP4O75161 1426 aaPredicted RBP7□□□□□ -1.29
KPNA1-204ENST00000466923 POGKQ9P215 609 aa7□□□□□ -1.29
KPNA1-204ENST00000466923 ROCK2O75116 1388 aaKnown RBP7□□□□□ -1.29
KPNA1-204ENST00000466923 DMRT2Q9Y5R5 561 aa7□□□□□ -1.29
KPNA1-204ENST00000466923 PRAM1Q96QH2 718 aa6.99□□□□□ -1.29
KPNA1-204ENST00000466923 TBX22Q9Y458 520 aa6.99□□□□□ -1.29
KPNA1-204ENST00000466923 HOMEZQ8IX15 550 aa6.99□□□□□ -1.29
KPNA1-204ENST00000466923 MINK1Q8N4C8 1332 aaPredicted RBP6.99□□□□□ -1.29
KPNA1-204ENST00000466923 ST20-MTHFSA0A0A6YYL1 179 aa6.99□□□□□ -1.29
KPNA1-204ENST00000466923 NEXMIFQ5QGS0 1516 aa6.99□□□□□ -1.29
KPNA1-204ENST00000466923 SCAF1Q9H7N4 1312 aaKnown RBP6.98□□□□□ -1.29
KPNA1-204ENST00000466923 CNGB1Q14028 1251 aaPredicted RBP6.98□□□□□ -1.29
KPNA1-204ENST00000466923 PLEKHG1Q9ULL1 1385 aa6.98□□□□□ -1.29
KPNA1-204ENST00000466923 PLEKHG5O94827 1062 aa6.98□□□□□ -1.29
KPNA1-204ENST00000466923 ADAMTS13Q76LX8 1427 aa6.98□□□□□ -1.29
KPNA1-204ENST00000466923 PRAG1Q86YV5 1406 aa6.98□□□□□ -1.29
KPNA1-204ENST00000466923 ARHGAP23Q9P227 1491 aa6.97□□□□□ -1.29
KPNA1-204ENST00000466923 PLEKHH1Q9ULM0 1364 aa6.97□□□□□ -1.29
KPNA1-204ENST00000466923 SLIT1O75093 1534 aa6.97□□□□□ -1.29
KPNA1-204ENST00000466923 PIK3C2GO75747 1445 aa6.96□□□□□ -1.29
KPNA1-204ENST00000466923 PIP4K2BP78356 416 aa6.96□□□□□ -1.29
KPNA1-204ENST00000466923 PTPRUQ92729 1446 aa6.96□□□□□ -1.3
KPNA1-204ENST00000466923 STRCQ7RTU9 1775 aa6.96□□□□□ -1.3
KPNA1-204ENST00000466923 PODXL2Q9NZ53 605 aa6.96□□□□□ -1.3
KPNA1-204ENST00000466923 NPM3O75607 178 aaKnown RBP6.96□□□□□ -1.3
KPNA1-204ENST00000466923 HSPA5P11021 654 aaKnown RBP6.96□□□□□ -1.3
KPNA1-204ENST00000466923 ROBO2Q9HCK4 1378 aa6.95□□□□□ -1.3
KPNA1-204ENST00000466923 ZEB1P37275 1124 aaPredicted RBP6.95□□□□□ -1.3
KPNA1-204ENST00000466923 STAC3Q96MF2 364 aa6.95□□□□□ -1.3
KPNA1-204ENST00000466923 EIF4G2P78344 907 aaKnown RBP eCLIP6.94□□□□□ -1.3
KPNA1-204ENST00000466923 CABP2Q9NPB3 220 aa6.94□□□□□ -1.3
KPNA1-204ENST00000466923 ALKQ9UM73 1620 aa6.94□□□□□ -1.3
KPNA1-204ENST00000466923 YTHDC2Q9H6S0 1430 aaKnown RBP6.94□□□□□ -1.3
KPNA1-204ENST00000466923 TMEM94Q12767 1356 aa6.94□□□□□ -1.3
KPNA1-204ENST00000466923 SRPK2P78362 688 aaKnown RBP6.94□□□□□ -1.3
KPNA1-204ENST00000466923 DDX17Q92841 729 aaKnown RBP6.94□□□□□ -1.3
KPNA1-204ENST00000466923 PPLO60437 1756 aa6.94□□□□□ -1.3
KPNA1-204ENST00000466923 ZNF142P52746 1687 aaPredicted RBP6.94□□□□□ -1.3
KPNA1-204ENST00000466923 C11orf95C9JLR9 678 aaPredicted RBP6.93□□□□□ -1.3
KPNA1-204ENST00000466923 XPCQ01831 940 aaPredicted RBP6.93□□□□□ -1.3
KPNA1-204ENST00000466923 PMFBP1Q8TBY8 1022 aa6.93□□□□□ -1.3
KPNA1-204ENST00000466923 TMC1Q8TDI8 760 aa6.93□□□□□ -1.3
KPNA1-204ENST00000466923 GTF3C3Q9Y5Q9 886 aa6.93□□□□□ -1.3
KPNA1-204ENST00000466923 USP47Q96K76 1375 aa6.93□□□□□ -1.3
KPNA1-204ENST00000466923 CENPJQ9HC77 1338 aaPredicted RBP6.93□□□□□ -1.3
KPNA1-204ENST00000466923 MED14O60244 1454 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms