RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 PPP1R15AO75807 674 aaPredicted RBP23.9■■□□□ 1.42
CRAMP1-204ENST00000466562 BCANQ96GW7 911 aa23.9■■□□□ 1.42
CRAMP1-204ENST00000466562 PLEKHG1Q9ULL1 1385 aa23.9■■□□□ 1.42
CRAMP1-204ENST00000466562 MYO5BQ9ULV0 1848 aa23.89■■□□□ 1.42
CRAMP1-204ENST00000466562 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.89■■□□□ 1.41
CRAMP1-204ENST00000466562 KCNA6P17658 529 aa23.88■■□□□ 1.41
CRAMP1-204ENST00000466562 SENP3Q9H4L4 574 aaPredicted RBP23.88■■□□□ 1.41
CRAMP1-204ENST00000466562 NUTM2DQ5VT03 806 aaPredicted RBP23.87■■□□□ 1.41
CRAMP1-204ENST00000466562 PIP4K2BP78356 416 aa23.86■■□□□ 1.41
CRAMP1-204ENST00000466562 SPHKAPQ2M3C7 1700 aa23.85■■□□□ 1.41
CRAMP1-204ENST00000466562 SLC4A1APQ9BWU0 796 aaKnown RBP23.84■■□□□ 1.41
CRAMP1-204ENST00000466562 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
CRAMP1-204ENST00000466562 ALKQ9UM73 1620 aa23.82■■□□□ 1.4
CRAMP1-204ENST00000466562 TRPM2O94759 1503 aa23.81■■□□□ 1.4
CRAMP1-204ENST00000466562 TBX22Q9Y458 520 aa23.81■■□□□ 1.4
CRAMP1-204ENST00000466562 ZNF326Q5BKZ1 582 aaKnown RBP23.79■■□□□ 1.4
CRAMP1-204ENST00000466562 TMEM94Q12767 1356 aa23.78■■□□□ 1.4
CRAMP1-204ENST00000466562 ADAMTS13Q76LX8 1427 aa23.78■■□□□ 1.4
CRAMP1-204ENST00000466562 PROSER2Q86WR7 435 aaPredicted RBP23.78■■□□□ 1.4
CRAMP1-204ENST00000466562 CLTCL1P53675 1640 aa23.77■■□□□ 1.4
CRAMP1-204ENST00000466562 NWD1Q149M9 1564 aa23.77■■□□□ 1.4
CRAMP1-204ENST00000466562 HSPA1LP34931 641 aa23.76■■□□□ 1.39
CRAMP1-204ENST00000466562 RBM33Q96EV2 1170 aaKnown RBP23.76■■□□□ 1.39
CRAMP1-204ENST00000466562 NKTRP30414 1462 aaKnown RBP23.75■■□□□ 1.39
CRAMP1-204ENST00000466562 XIRP1Q702N8 1843 aaKnown RBP23.74■■□□□ 1.39
CRAMP1-204ENST00000466562 FOXD1Q16676 465 aa23.73■■□□□ 1.39
CRAMP1-204ENST00000466562 MPHOSPH9Q99550 1183 aa23.72■■□□□ 1.39
CRAMP1-204ENST00000466562 DIP2AQ14689 1571 aa23.71■■□□□ 1.39
CRAMP1-204ENST00000466562 PIK3R4Q99570 1358 aa23.71■■□□□ 1.39
CRAMP1-204ENST00000466562 SETD5Q9C0A6 1442 aa23.7■■□□□ 1.38
CRAMP1-204ENST00000466562 CHD2O14647 1828 aaKnown RBP23.7■■□□□ 1.38
CRAMP1-204ENST00000466562 NEXMIFQ5QGS0 1516 aa23.68■■□□□ 1.38
CRAMP1-204ENST00000466562 ACIN1Q9UKV3 1341 aaKnown RBP23.67■■□□□ 1.38
CRAMP1-204ENST00000466562 SETBP1Q9Y6X0 1596 aa23.66■■□□□ 1.38
CRAMP1-204ENST00000466562 KIF1BO60333 1816 aa23.66■■□□□ 1.38
CRAMP1-204ENST00000466562 DISP3Q9P2K9 1392 aa23.65■■□□□ 1.38
CRAMP1-204ENST00000466562 AMOTL2Q9Y2J4 779 aa23.65■■□□□ 1.38
CRAMP1-204ENST00000466562 NRXN3Q9Y4C0 1643 aa23.65■■□□□ 1.38
CRAMP1-204ENST00000466562 PTPRUQ92729 1446 aa23.65■■□□□ 1.38
CRAMP1-204ENST00000466562 MSH6P52701 1360 aa23.64■■□□□ 1.37
CRAMP1-204ENST00000466562 RAB3GAP2Q9H2M9 1393 aa23.63■■□□□ 1.37
CRAMP1-204ENST00000466562 RPGRIP1LQ68CZ1 1315 aa23.62■■□□□ 1.37
CRAMP1-204ENST00000466562 NCOA3Q9Y6Q9 1424 aa23.62■■□□□ 1.37
CRAMP1-204ENST00000466562 VGFO15240 615 aaPredicted RBP23.62■■□□□ 1.37
CRAMP1-204ENST00000466562 CCDC144AA2RUR9 1427 aa23.61■■□□□ 1.37
CRAMP1-204ENST00000466562 FAM135BQ49AJ0 1406 aa23.61■■□□□ 1.37
CRAMP1-204ENST00000466562 METP08581 1390 aa23.61■■□□□ 1.37
CRAMP1-204ENST00000466562 C14orf37Q86TY3 774 aa23.57■■□□□ 1.36
CRAMP1-204ENST00000466562 SLAIN2Q9P270 581 aa23.57■■□□□ 1.36
CRAMP1-204ENST00000466562 C19orf44Q9H6X5 657 aa23.55■■□□□ 1.36
CRAMP1-204ENST00000466562 SPATA31E1Q6ZUB1 1445 aa23.54■■□□□ 1.36
CRAMP1-204ENST00000466562 RGL3Q3MIN7 710 aa23.54■■□□□ 1.36
CRAMP1-204ENST00000466562 XRN1Q8IZH2 1706 aaKnown RBP23.53■■□□□ 1.36
CRAMP1-204ENST00000466562 CADPS2Q86UW7 1296 aa23.51■■□□□ 1.35
CRAMP1-204ENST00000466562 ROBO1Q9Y6N7 1651 aa23.51■■□□□ 1.35
CRAMP1-204ENST00000466562 PPLO60437 1756 aa23.5■■□□□ 1.35
CRAMP1-204ENST00000466562 HRCP23327 699 aa23.5■■□□□ 1.35
CRAMP1-204ENST00000466562 ATF3P18847 181 aa23.49■■□□□ 1.35
CRAMP1-204ENST00000466562 ILDR2Q71H61 639 aa23.49■■□□□ 1.35
CRAMP1-204ENST00000466562 ADGRF5Q8IZF2 1346 aa23.49■■□□□ 1.35
CRAMP1-204ENST00000466562 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.47■■□□□ 1.35
CRAMP1-204ENST00000466562 ANKRD30BQ9BXX2 1392 aa23.47■■□□□ 1.35
CRAMP1-204ENST00000466562 MED1Q15648 1581 aaPredicted RBP23.47■■□□□ 1.35
CRAMP1-204ENST00000466562 SETD1AO15047 1707 aaKnown RBP23.45■■□□□ 1.34
CRAMP1-204ENST00000466562 DCCP43146 1447 aa23.43■■□□□ 1.34
CRAMP1-204ENST00000466562 PTCH1Q13635 1447 aa23.42■■□□□ 1.34
CRAMP1-204ENST00000466562 ROBO2Q9HCK4 1378 aa23.41■■□□□ 1.34
CRAMP1-204ENST00000466562 PRAG1Q86YV5 1406 aa23.4■■□□□ 1.34
CRAMP1-204ENST00000466562 ADGRL3Q9HAR2 1447 aa23.4■■□□□ 1.34
CRAMP1-204ENST00000466562 IFT172Q9UG01 1749 aa23.39■■□□□ 1.34
CRAMP1-204ENST00000466562 PIK3C2GO75747 1445 aa23.38■■□□□ 1.33
CRAMP1-204ENST00000466562 BRINP3Q76B58 766 aa23.37■■□□□ 1.33
CRAMP1-204ENST00000466562 MST1RQ04912 1400 aa23.36■■□□□ 1.33
CRAMP1-204ENST00000466562 PHF23Q9BUL5 403 aaPredicted RBP23.35■■□□□ 1.33
CRAMP1-204ENST00000466562 PHLPP1O60346 1717 aa23.34■■□□□ 1.33
CRAMP1-204ENST00000466562 TMEM132EQ6IEE7 984 aa23.34■■□□□ 1.33
CRAMP1-204ENST00000466562 NALCNQ8IZF0 1738 aa23.33■■□□□ 1.33
CRAMP1-204ENST00000466562 MYOM2P54296 1465 aa23.32■■□□□ 1.32
CRAMP1-204ENST00000466562 NRXN1Q9ULB1 1477 aa23.32■■□□□ 1.32
CRAMP1-204ENST00000466562 C14orf93Q9H972 538 aaKnown RBP23.32■■□□□ 1.32
CRAMP1-204ENST00000466562 STK26Q9P289 416 aa23.32■■□□□ 1.32
CRAMP1-204ENST00000466562 LRPPRCP42704 1394 aaKnown RBP23.31■■□□□ 1.32
CRAMP1-204ENST00000466562 JCADQ9P266 1359 aa23.31■■□□□ 1.32
CRAMP1-204ENST00000466562 AHDC1Q5TGY3 1603 aaPredicted RBP23.31■■□□□ 1.32
CRAMP1-204ENST00000466562 COL16A1Q07092 1604 aaPredicted RBP23.3■■□□□ 1.32
CRAMP1-204ENST00000466562 ABCC11Q96J66 1382 aa23.3■■□□□ 1.32
CRAMP1-204ENST00000466562 ASXL1Q8IXJ9 1541 aa23.3■■□□□ 1.32
CRAMP1-204ENST00000466562 TECPR2O15040 1411 aa23.3■■□□□ 1.32
CRAMP1-204ENST00000466562 CFAP70Q5T0N1 1121 aa23.29■■□□□ 1.32
CRAMP1-204ENST00000466562 WAPLQ7Z5K2 1190 aa23.28■■□□□ 1.32
CRAMP1-204ENST00000466562 C1orf167Q5SNV9 1468 aa23.27■■□□□ 1.32
CRAMP1-204ENST00000466562 YTHDC2Q9H6S0 1430 aaKnown RBP23.26■■□□□ 1.31
CRAMP1-204ENST00000466562 SOCS7O14512 581 aa23.26■■□□□ 1.31
CRAMP1-204ENST00000466562 DCAF11Q8TEB1 546 aa23.25■■□□□ 1.31
CRAMP1-204ENST00000466562 RGS17Q9UGC6 210 aaPredicted RBP23.25■■□□□ 1.31
CRAMP1-204ENST00000466562 KDM2AQ9Y2K7 1162 aa23.24■■□□□ 1.31
CRAMP1-204ENST00000466562 DDX17Q92841 729 aaKnown RBP23.23■■□□□ 1.31
CRAMP1-204ENST00000466562 SIRT1Q96EB6 747 aa23.23■■□□□ 1.31
CRAMP1-204ENST00000466562 ORAI2Q96SN7 254 aa23.23■■□□□ 1.31
CRAMP1-204ENST00000466562 DHX57Q6P158 1386 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms