RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 GJA5P36382 358 aa8.62□□□□□ -1.03
CDC42BPA-211ENST00000466538 CLK2P49760 499 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-211ENST00000466538 PSEN2P49810 448 aa8.62□□□□□ -1.03
CDC42BPA-211ENST00000466538 HDGFP51858 240 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-211ENST00000466538 NUTM1Q86Y26 1132 aa8.62□□□□□ -1.03
CDC42BPA-211ENST00000466538 ZNF687Q8N1G0 1237 aa8.62□□□□□ -1.03
CDC42BPA-211ENST00000466538 SPIRE2Q8WWL2 714 aa8.62□□□□□ -1.03
CDC42BPA-211ENST00000466538 ATP1B4Q9UN42 357 aaPredicted RBP8.62□□□□□ -1.03
CDC42BPA-211ENST00000466538 SMAPO00193 183 aa8.61□□□□□ -1.03
CDC42BPA-211ENST00000466538 SPTLC1O15269 473 aa8.6□□□□□ -1.03
CDC42BPA-211ENST00000466538 RIC3Q7Z5B4 369 aa8.6□□□□□ -1.03
CDC42BPA-211ENST00000466538 EMP3P54852 163 aa8.59□□□□□ -1.03
CDC42BPA-211ENST00000466538 SUPT5HO00267 1087 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-211ENST00000466538 SLC4A3P48751 1232 aa8.58□□□□□ -1.04
CDC42BPA-211ENST00000466538 USP46P62068 366 aa8.58□□□□□ -1.04
CDC42BPA-211ENST00000466538 PPP2R2DQ66LE6 453 aa8.58□□□□□ -1.04
CDC42BPA-211ENST00000466538 POTEEQ6S8J3 1075 aa8.58□□□□□ -1.04
CDC42BPA-211ENST00000466538 LAPTM4BQ86VI4 370 aa8.58□□□□□ -1.04
CDC42BPA-211ENST00000466538 BANK1Q8NDB2 785 aa8.58□□□□□ -1.04
CDC42BPA-211ENST00000466538 FAM98CQ17RN3 349 aaKnown RBP8.57□□□□□ -1.04
CDC42BPA-211ENST00000466538 TMEM259Q4ZIN3 620 aa8.57□□□□□ -1.04
CDC42BPA-211ENST00000466538 RDH13Q8NBN7 331 aa8.57□□□□□ -1.04
CDC42BPA-211ENST00000466538 ARXQ96QS3 562 aa8.57□□□□□ -1.04
CDC42BPA-211ENST00000466538 VPS9D1Q9Y2B5 631 aa8.57□□□□□ -1.04
CDC42BPA-211ENST00000466538 A6NJR5 290 aa8.56□□□□□ -1.04
CDC42BPA-211ENST00000466538 TK2O00142 265 aa8.56□□□□□ -1.04
CDC42BPA-211ENST00000466538 KDM4AO75164 1064 aa8.56□□□□□ -1.04
CDC42BPA-211ENST00000466538 GCGRP47871 477 aa8.56□□□□□ -1.04
CDC42BPA-211ENST00000466538 DMRTA1Q5VZB9 504 aa8.56□□□□□ -1.04
CDC42BPA-211ENST00000466538 RSBN1LQ6PCB5 846 aaPredicted RBP8.56□□□□□ -1.04
CDC42BPA-211ENST00000466538 FAM205CA6NFA0 338 aa8.55□□□□□ -1.04
CDC42BPA-211ENST00000466538 SWT1Q5T5J6 900 aaKnown RBP8.55□□□□□ -1.04
CDC42BPA-211ENST00000466538 MARVELD3Q96A59 401 aa8.55□□□□□ -1.04
CDC42BPA-211ENST00000466538 NBPF3Q9H094 633 aa8.55□□□□□ -1.04
CDC42BPA-211ENST00000466538 LIMD1Q9UGP4 676 aa8.55□□□□□ -1.04
CDC42BPA-211ENST00000466538 AXIN2Q9Y2T1 843 aa8.55□□□□□ -1.04
CDC42BPA-211ENST00000466538 MOXD2PA6NHM9 499 aa8.54□□□□□ -1.04
CDC42BPA-211ENST00000466538 RFC5P40937 340 aa8.54□□□□□ -1.04
CDC42BPA-211ENST00000466538 MCM6Q14566 821 aa8.54□□□□□ -1.04
CDC42BPA-211ENST00000466538 SLF2Q8IX21 1173 aa8.54□□□□□ -1.04
CDC42BPA-211ENST00000466538 SPDYE5A6NIY4 337 aa8.53□□□□□ -1.04
CDC42BPA-211ENST00000466538 BHMG1C9JSJ3 638 aaPredicted RBP8.53□□□□□ -1.04
CDC42BPA-211ENST00000466538 SEPT9Q9UHD8 586 aaPredicted RBP8.53□□□□□ -1.04
CDC42BPA-211ENST00000466538 SLC10A3P09131 477 aa8.52□□□□□ -1.05
CDC42BPA-211ENST00000466538 UBTFP17480 764 aaKnown RBP8.52□□□□□ -1.05
CDC42BPA-211ENST00000466538 PRPF38BQ5VTL8 546 aaKnown RBP8.52□□□□□ -1.05
CDC42BPA-211ENST00000466538 FAM163AQ96GL9 167 aaPredicted RBP8.52□□□□□ -1.05
CDC42BPA-211ENST00000466538 LILRB3O75022 631 aa8.51□□□□□ -1.05
CDC42BPA-211ENST00000466538 GRIPAP1Q4V328 841 aa8.51□□□□□ -1.05
CDC42BPA-211ENST00000466538 NECTIN2Q92692 538 aa8.51□□□□□ -1.05
CDC42BPA-211ENST00000466538 NDUFV2P19404 249 aa8.5□□□□□ -1.05
CDC42BPA-211ENST00000466538 HS3ST6Q96QI5 342 aa8.5□□□□□ -1.05
CDC42BPA-211ENST00000466538 SOCS7O14512 581 aa8.49□□□□□ -1.05
CDC42BPA-211ENST00000466538 HOXA2O43364 376 aa8.49□□□□□ -1.05
CDC42BPA-211ENST00000466538 RAD21O60216 631 aa8.49□□□□□ -1.05
CDC42BPA-211ENST00000466538 SAMD7Q7Z3H4 446 aa8.49□□□□□ -1.05
CDC42BPA-211ENST00000466538 PCDHB15Q9Y5E8 787 aa8.49□□□□□ -1.05
CDC42BPA-211ENST00000466538 FDX1P10109 184 aa8.48□□□□□ -1.05
CDC42BPA-211ENST00000466538 MRPL50Q8N5N7 158 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-211ENST00000466538 ZFRQ96KR1 1074 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-211ENST00000466538 NUTM2BA6NNL0 878 aaPredicted RBP8.47□□□□□ -1.05
CDC42BPA-211ENST00000466538 NUTM2EB1AL46 878 aaPredicted RBP8.47□□□□□ -1.05
CDC42BPA-211ENST00000466538 TRAK2O60296 914 aa8.47□□□□□ -1.05
CDC42BPA-211ENST00000466538 CSPP1Q1MSJ5 1256 aa8.47□□□□□ -1.05
CDC42BPA-211ENST00000466538 NUTM2DQ5VT03 806 aaPredicted RBP8.47□□□□□ -1.05
CDC42BPA-211ENST00000466538 FBXO31Q5XUX0 539 aaPredicted RBP8.47□□□□□ -1.05
CDC42BPA-211ENST00000466538 NUTM2AQ8IVF1 878 aaPredicted RBP8.47□□□□□ -1.05
CDC42BPA-211ENST00000466538 ZBTB3Q9H5J0 574 aa8.47□□□□□ -1.05
CDC42BPA-211ENST00000466538 APBB1O00213 710 aa8.46□□□□□ -1.06
CDC42BPA-211ENST00000466538 LSM11P83369 360 aaKnown RBP eCLIP8.46□□□□□ -1.06
CDC42BPA-211ENST00000466538 QPCTQ16769 361 aa8.46□□□□□ -1.06
CDC42BPA-211ENST00000466538 ADGRD1Q6QNK2 874 aa8.46□□□□□ -1.06
CDC42BPA-211ENST00000466538 CLUAP1Q96AJ1 413 aa8.46□□□□□ -1.06
CDC42BPA-211ENST00000466538 POTEB3A0JP26 581 aa8.45□□□□□ -1.06
CDC42BPA-211ENST00000466538 HRCP23327 699 aa8.45□□□□□ -1.06
CDC42BPA-211ENST00000466538 ATP6V1AP38606 617 aa8.45□□□□□ -1.06
CDC42BPA-211ENST00000466538 KMT5BQ4FZB7 885 aa8.45□□□□□ -1.06
CDC42BPA-211ENST00000466538 POTEBQ6S5H4 581 aa8.45□□□□□ -1.06
CDC42BPA-211ENST00000466538 PRM3Q9NNZ6 103 aa8.45□□□□□ -1.06
CDC42BPA-211ENST00000466538 SNRKQ9NRH2 765 aa8.45□□□□□ -1.06
CDC42BPA-211ENST00000466538 RTL5Q5HYW3 569 aaPredicted RBP8.44□□□□□ -1.06
CDC42BPA-211ENST00000466538 HOMEZQ8IX15 550 aa8.44□□□□□ -1.06
CDC42BPA-211ENST00000466538 STAC3Q96MF2 364 aa8.44□□□□□ -1.06
CDC42BPA-211ENST00000466538 HRO43593 1189 aa8.43□□□□□ -1.06
CDC42BPA-211ENST00000466538 CFHP08603 1231 aa8.43□□□□□ -1.06
CDC42BPA-211ENST00000466538 LRCH3Q96II8 777 aa8.43□□□□□ -1.06
CDC42BPA-211ENST00000466538 PRR14Q9BWN1 585 aa8.43□□□□□ -1.06
CDC42BPA-211ENST00000466538 PCDHGC3Q9UN70 934 aa8.43□□□□□ -1.06
CDC42BPA-211ENST00000466538 AP1G2O75843 785 aa8.42□□□□□ -1.06
CDC42BPA-211ENST00000466538 FUT2Q10981 343 aa8.42□□□□□ -1.06
CDC42BPA-211ENST00000466538 MTMR2Q13614 643 aa8.42□□□□□ -1.06
CDC42BPA-211ENST00000466538 PROSER2Q86WR7 435 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-211ENST00000466538 FNBP4Q8N3X1 1017 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-211ENST00000466538 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-211ENST00000466538 COG6Q9Y2V7 657 aa8.42□□□□□ -1.06
CDC42BPA-211ENST00000466538 GOLGA8CPA6NN73 597 aa8.41□□□□□ -1.06
CDC42BPA-211ENST00000466538 ACTN4O43707 911 aaKnown RBP8.41□□□□□ -1.06
CDC42BPA-211ENST00000466538 CABLES1Q8TDN4 633 aa8.41□□□□□ -1.06
CDC42BPA-211ENST00000466538 RNF40O75150 1001 aa8.4□□□□□ -1.06
CDC42BPA-211ENST00000466538 WWC1Q8IX03 1113 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms