RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 NRXN1Q9ULB1 1477 aa29.41■■■□□ 2.3
PPP1R3F-203ENST00000466508 CHGAP10645 457 aaKnown RBP29.38■■■□□ 2.29
PPP1R3F-203ENST00000466508 SLC52A1Q9NWF4 448 aa29.37■■■□□ 2.29
PPP1R3F-203ENST00000466508 ERVK-7P63135 1459 aa29.37■■■□□ 2.29
PPP1R3F-203ENST00000466508 RPGRIP1LQ68CZ1 1315 aa29.35■■■□□ 2.29
PPP1R3F-203ENST00000466508 YTHDC1Q96MU7 727 aaKnown RBP29.35■■■□□ 2.29
PPP1R3F-203ENST00000466508 ADGRF5Q8IZF2 1346 aa29.35■■■□□ 2.29
PPP1R3F-203ENST00000466508 ADAMTSL3P82987 1691 aa29.33■■■□□ 2.29
PPP1R3F-203ENST00000466508 SCAF11Q99590 1463 aaKnown RBP29.32■■■□□ 2.28
PPP1R3F-203ENST00000466508 CENPBP07199 599 aaPredicted RBP29.31■■■□□ 2.28
PPP1R3F-203ENST00000466508 IDI1Q13907 227 aa29.31■■■□□ 2.28
PPP1R3F-203ENST00000466508 MYO5BQ9ULV0 1848 aa29.31■■■□□ 2.28
PPP1R3F-203ENST00000466508 MLECQ14165 292 aa29.31■■■□□ 2.28
PPP1R3F-203ENST00000466508 TMEM131LA2VDJ0 1609 aa29.3■■■□□ 2.28
PPP1R3F-203ENST00000466508 NEXMIFQ5QGS0 1516 aa29.3■■■□□ 2.28
PPP1R3F-203ENST00000466508 CCER2I3L3R5 266 aa29.3■■■□□ 2.28
PPP1R3F-203ENST00000466508 SPATA31D1Q6ZQQ2 1576 aa29.3■■■□□ 2.28
PPP1R3F-203ENST00000466508 PIK3C2GO75747 1445 aa29.29■■■□□ 2.28
PPP1R3F-203ENST00000466508 FBXO31Q5XUX0 539 aaPredicted RBP29.28■■■□□ 2.28
PPP1R3F-203ENST00000466508 TESK2Q96S53 571 aa29.27■■■□□ 2.28
PPP1R3F-203ENST00000466508 SETBP1Q9Y6X0 1596 aa29.26■■■□□ 2.28
PPP1R3F-203ENST00000466508 CFAP70Q5T0N1 1121 aa29.25■■■□□ 2.27
PPP1R3F-203ENST00000466508 POLR3GLQ9BT43 218 aa29.25■■■□□ 2.27
PPP1R3F-203ENST00000466508 EIF3AQ14152 1382 aaKnown RBP29.22■■■□□ 2.27
PPP1R3F-203ENST00000466508 PTPRMP28827 1452 aa29.21■■■□□ 2.27
PPP1R3F-203ENST00000466508 ESF1Q9H501 851 aaKnown RBP29.21■■■□□ 2.27
PPP1R3F-203ENST00000466508 ZFYVE9O95405 1425 aa29.2■■■□□ 2.26
PPP1R3F-203ENST00000466508 VGFO15240 615 aaPredicted RBP29.19■■■□□ 2.26
PPP1R3F-203ENST00000466508 DISP3Q9P2K9 1392 aa29.19■■■□□ 2.26
PPP1R3F-203ENST00000466508 ZMYM3Q14202 1370 aa29.18■■■□□ 2.26
PPP1R3F-203ENST00000466508 RIMS1Q86UR5 1692 aaKnown RBP29.17■■■□□ 2.26
PPP1R3F-203ENST00000466508 TMF1P82094 1093 aa29.17■■■□□ 2.26
PPP1R3F-203ENST00000466508 C14orf93Q9H972 538 aaKnown RBP29.17■■■□□ 2.26
PPP1R3F-203ENST00000466508 ADGRB1O14514 1584 aa29.16■■■□□ 2.26
PPP1R3F-203ENST00000466508 MYO3AQ8NEV4 1616 aa29.15■■■□□ 2.26
PPP1R3F-203ENST00000466508 PRKRIP1Q9H875 184 aaPredicted RBP29.14■■■□□ 2.26
PPP1R3F-203ENST00000466508 FER1L4A9Z1Z3 1794 aa29.13■■■□□ 2.25
PPP1R3F-203ENST00000466508 A2ML1A8K2U0 1454 aa29.08■■■□□ 2.25
PPP1R3F-203ENST00000466508 NUTM2DQ5VT03 806 aaPredicted RBP29.08■■■□□ 2.25
PPP1R3F-203ENST00000466508 STAG3Q9UJ98 1225 aa29.07■■■□□ 2.24
PPP1R3F-203ENST00000466508 PLPPR3Q6T4P5 718 aa29.06■■■□□ 2.24
PPP1R3F-203ENST00000466508 SLC24A1O60721 1099 aa29.05■■■□□ 2.24
PPP1R3F-203ENST00000466508 SBNO2Q9Y2G9 1366 aa29.04■■■□□ 2.24
PPP1R3F-203ENST00000466508 CDCA8Q53HL2 280 aa29.04■■■□□ 2.24
PPP1R3F-203ENST00000466508 KDM5AP29375 1690 aaKnown RBP29.03■■■□□ 2.24
PPP1R3F-203ENST00000466508 TNRQ92752 1358 aa29.02■■■□□ 2.24
PPP1R3F-203ENST00000466508 QRICH2Q9H0J4 1663 aa29.01■■■□□ 2.23
PPP1R3F-203ENST00000466508 ARHGEF28Q8N1W1 1705 aaKnown RBP29■■■□□ 2.23
PPP1R3F-203ENST00000466508 TMEM132EQ6IEE7 984 aa29■■■□□ 2.23
PPP1R3F-203ENST00000466508 ASXL1Q8IXJ9 1541 aa28.98■■■□□ 2.23
PPP1R3F-203ENST00000466508 C3P01024 1663 aa28.98■■■□□ 2.23
PPP1R3F-203ENST00000466508 CENPJQ9HC77 1338 aaPredicted RBP28.98■■■□□ 2.23
PPP1R3F-203ENST00000466508 MYOM1P52179 1685 aa28.97■■■□□ 2.23
PPP1R3F-203ENST00000466508 TRAK1Q9UPV9 953 aa28.97■■■□□ 2.23
PPP1R3F-203ENST00000466508 RIMS2Q9UQ26 1411 aa28.97■■■□□ 2.23
PPP1R3F-203ENST00000466508 CEBPAP49715 358 aaPredicted RBP28.95■■■□□ 2.23
PPP1R3F-203ENST00000466508 UBR1Q8IWV7 1749 aa28.95■■■□□ 2.23
PPP1R3F-203ENST00000466508 KTN1Q86UP2 1357 aaKnown RBP28.95■■■□□ 2.22
PPP1R3F-203ENST00000466508 ALKQ9UM73 1620 aa28.94■■■□□ 2.22
PPP1R3F-203ENST00000466508 PER1O15534 1290 aaPredicted RBP28.93■■■□□ 2.22
PPP1R3F-203ENST00000466508 NLRP1Q9C000 1473 aa28.91■■■□□ 2.22
PPP1R3F-203ENST00000466508 PANK3Q9H999 370 aa28.91■■■□□ 2.22
PPP1R3F-203ENST00000466508 CCDC184Q52MB2 194 aa28.9■■■□□ 2.22
PPP1R3F-203ENST00000466508 SETD1AO15047 1707 aaKnown RBP28.88■■■□□ 2.21
PPP1R3F-203ENST00000466508 MRS2Q9HD23 443 aa28.88■■■□□ 2.21
PPP1R3F-203ENST00000466508 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.87■■■□□ 2.21
PPP1R3F-203ENST00000466508 CNGB1Q14028 1251 aaPredicted RBP28.86■■■□□ 2.21
PPP1R3F-203ENST00000466508 RALBP1Q15311 655 aa28.86■■■□□ 2.21
PPP1R3F-203ENST00000466508 NRXN3Q9Y4C0 1643 aa28.85■■■□□ 2.21
PPP1R3F-203ENST00000466508 YTHDC2Q9H6S0 1430 aaKnown RBP28.85■■■□□ 2.21
PPP1R3F-203ENST00000466508 LMTK3Q96Q04 1460 aa28.83■■■□□ 2.21
PPP1R3F-203ENST00000466508 PARD3Q8TEW0 1356 aa28.83■■■□□ 2.21
PPP1R3F-203ENST00000466508 SENP3Q9H4L4 574 aaPredicted RBP28.83■■■□□ 2.2
PPP1R3F-203ENST00000466508 TMEM2Q9UHN6 1383 aa28.82■■■□□ 2.2
PPP1R3F-203ENST00000466508 HDGFP51858 240 aaKnown RBP28.81■■■□□ 2.2
PPP1R3F-203ENST00000466508 SETD1BQ9UPS6 1966 aaKnown RBP28.8■■■□□ 2.2
PPP1R3F-203ENST00000466508 MYBBP1AQ9BQG0 1328 aaKnown RBP28.8■■■□□ 2.2
PPP1R3F-203ENST00000466508 STK26Q9P289 416 aa28.78■■■□□ 2.2
PPP1R3F-203ENST00000466508 TULP4Q9NRJ4 1543 aa28.77■■■□□ 2.2
PPP1R3F-203ENST00000466508 DLC1Q96QB1 1528 aa28.75■■■□□ 2.19
PPP1R3F-203ENST00000466508 KNSTRNQ9Y448 316 aa28.74■■■□□ 2.19
PPP1R3F-203ENST00000466508 BRD4O60885 1362 aaPredicted RBP28.74■■■□□ 2.19
PPP1R3F-203ENST00000466508 SCAF1Q9H7N4 1312 aaKnown RBP28.74■■■□□ 2.19
PPP1R3F-203ENST00000466508 EVC2Q86UK5 1308 aa28.73■■■□□ 2.19
PPP1R3F-203ENST00000466508 HSPA2P54652 639 aa28.73■■■□□ 2.19
PPP1R3F-203ENST00000466508 PUS7Q96PZ0 661 aaKnown RBP28.73■■■□□ 2.19
PPP1R3F-203ENST00000466508 LRPPRCP42704 1394 aaKnown RBP28.72■■■□□ 2.19
PPP1R3F-203ENST00000466508 CC2D1BQ5T0F9 858 aaKnown RBP28.71■■■□□ 2.19
PPP1R3F-203ENST00000466508 FAM9BQ8IZU0 186 aa28.71■■■□□ 2.19
PPP1R3F-203ENST00000466508 SLIT1O75093 1534 aa28.7■■■□□ 2.18
PPP1R3F-203ENST00000466508 PRAM1Q96QH2 718 aa28.7■■■□□ 2.18
PPP1R3F-203ENST00000466508 NPC1L1Q9UHC9 1359 aa28.69■■■□□ 2.18
PPP1R3F-203ENST00000466508 AMER1Q5JTC6 1135 aaPredicted RBP28.69■■■□□ 2.18
PPP1R3F-203ENST00000466508 TMC1Q8TDI8 760 aa28.69■■■□□ 2.18
PPP1R3F-203ENST00000466508 KNDC1Q76NI1 1749 aa28.68■■■□□ 2.18
PPP1R3F-203ENST00000466508 HNRNPUQ00839 825 aaKnown RBP eCLIP28.68■■■□□ 2.18
PPP1R3F-203ENST00000466508 NLRP13Q86W25 1043 aa28.68■■■□□ 2.18
PPP1R3F-203ENST00000466508 ARHGAP23Q9P227 1491 aa28.68■■■□□ 2.18
PPP1R3F-203ENST00000466508 ABCC11Q96J66 1382 aa28.68■■■□□ 2.18
PPP1R3F-203ENST00000466508 SAFB2Q14151 953 aaKnown RBP eCLIP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms