RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 FAM9BQ8IZU0 186 aa18.6■□□□□ 0.57
UBE4B-206ENST00000466379 NOS1P29475 1434 aa18.59■□□□□ 0.57
UBE4B-206ENST00000466379 SCAF11Q99590 1463 aaKnown RBP18.58■□□□□ 0.57
UBE4B-206ENST00000466379 SYNMO15061 1565 aa18.58■□□□□ 0.57
UBE4B-206ENST00000466379 TMF1P82094 1093 aa18.58■□□□□ 0.56
UBE4B-206ENST00000466379 KIAA1210Q9ULL0 1709 aa18.57■□□□□ 0.56
UBE4B-206ENST00000466379 ZC3H13Q5T200 1668 aaKnown RBP18.57■□□□□ 0.56
UBE4B-206ENST00000466379 PPLO60437 1756 aa18.55■□□□□ 0.56
UBE4B-206ENST00000466379 NRXN1Q9ULB1 1477 aa18.54■□□□□ 0.56
UBE4B-206ENST00000466379 PIK3C2BO00750 1634 aa18.54■□□□□ 0.56
UBE4B-206ENST00000466379 ARHGAP31Q2M1Z3 1444 aa18.53■□□□□ 0.56
UBE4B-206ENST00000466379 NUTM2DQ5VT03 806 aaPredicted RBP18.52■□□□□ 0.56
UBE4B-206ENST00000466379 PANK3Q9H999 370 aa18.51■□□□□ 0.55
UBE4B-206ENST00000466379 IDI1Q13907 227 aa18.5■□□□□ 0.55
UBE4B-206ENST00000466379 PREX1Q8TCU6 1659 aa18.5■□□□□ 0.55
UBE4B-206ENST00000466379 EIF3AQ14152 1382 aaKnown RBP18.5■□□□□ 0.55
UBE4B-206ENST00000466379 PER1O15534 1290 aaPredicted RBP18.49■□□□□ 0.55
UBE4B-206ENST00000466379 PIK3C2GO75747 1445 aa18.48■□□□□ 0.55
UBE4B-206ENST00000466379 MLECQ14165 292 aa18.48■□□□□ 0.55
UBE4B-206ENST00000466379 FBXO31Q5XUX0 539 aaPredicted RBP18.48■□□□□ 0.55
UBE4B-206ENST00000466379 REREQ9P2R6 1566 aa18.47■□□□□ 0.55
UBE4B-206ENST00000466379 SUPT16HQ9Y5B9 1047 aaKnown RBP18.47■□□□□ 0.55
UBE4B-206ENST00000466379 NEXMIFQ5QGS0 1516 aa18.46■□□□□ 0.55
UBE4B-206ENST00000466379 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
UBE4B-206ENST00000466379 RPGRIP1LQ68CZ1 1315 aa18.46■□□□□ 0.55
UBE4B-206ENST00000466379 KTN1Q86UP2 1357 aaKnown RBP18.46■□□□□ 0.55
UBE4B-206ENST00000466379 MYO5BQ9ULV0 1848 aa18.46■□□□□ 0.55
UBE4B-206ENST00000466379 RALBP1Q15311 655 aa18.46■□□□□ 0.54
UBE4B-206ENST00000466379 CC2D1BQ5T0F9 858 aaKnown RBP18.46■□□□□ 0.54
UBE4B-206ENST00000466379 MYBBP1AQ9BQG0 1328 aaKnown RBP18.45■□□□□ 0.54
UBE4B-206ENST00000466379 AGLP35573 1532 aa18.45■□□□□ 0.54
UBE4B-206ENST00000466379 CLTCQ00610 1675 aaKnown RBP18.45■□□□□ 0.54
UBE4B-206ENST00000466379 TMEM132EQ6IEE7 984 aa18.45■□□□□ 0.54
UBE4B-206ENST00000466379 TMC1Q8TDI8 760 aa18.44■□□□□ 0.54
UBE4B-206ENST00000466379 C14orf93Q9H972 538 aaKnown RBP18.44■□□□□ 0.54
UBE4B-206ENST00000466379 ARHGEF40Q8TER5 1519 aa18.44■□□□□ 0.54
UBE4B-206ENST00000466379 SETBP1Q9Y6X0 1596 aa18.44■□□□□ 0.54
UBE4B-206ENST00000466379 PARD3Q8TEW0 1356 aa18.43■□□□□ 0.54
UBE4B-206ENST00000466379 SLC52A1Q9NWF4 448 aa18.43■□□□□ 0.54
UBE4B-206ENST00000466379 TRAK1Q9UPV9 953 aa18.43■□□□□ 0.54
UBE4B-206ENST00000466379 ADGRB1O14514 1584 aa18.42■□□□□ 0.54
UBE4B-206ENST00000466379 ERVK-7P63135 1459 aa18.42■□□□□ 0.54
UBE4B-206ENST00000466379 MYOM1P52179 1685 aa18.42■□□□□ 0.54
UBE4B-206ENST00000466379 TMEM131LA2VDJ0 1609 aa18.41■□□□□ 0.54
UBE4B-206ENST00000466379 SENP3-EIF4A1A0A087X0R7 540 aa18.41■□□□□ 0.54
UBE4B-206ENST00000466379 CDCA8Q53HL2 280 aa18.41■□□□□ 0.54
UBE4B-206ENST00000466379 PNISRQ8TF01 805 aaKnown RBP18.41■□□□□ 0.54
UBE4B-206ENST00000466379 KDM5AP29375 1690 aaKnown RBP18.41■□□□□ 0.54
UBE4B-206ENST00000466379 MYO3AQ8NEV4 1616 aa18.4■□□□□ 0.54
UBE4B-206ENST00000466379 VGFO15240 615 aaPredicted RBP18.39■□□□□ 0.54
UBE4B-206ENST00000466379 BRD4O60885 1362 aaPredicted RBP18.39■□□□□ 0.53
UBE4B-206ENST00000466379 FKBP8Q14318 412 aa18.38■□□□□ 0.53
UBE4B-206ENST00000466379 ZBED9Q6R2W3 1325 aa18.38■□□□□ 0.53
UBE4B-206ENST00000466379 CENPJQ9HC77 1338 aaPredicted RBP18.38■□□□□ 0.53
UBE4B-206ENST00000466379 QRICH2Q9H0J4 1663 aa18.36■□□□□ 0.53
UBE4B-206ENST00000466379 NLRP13Q86W25 1043 aa18.36■□□□□ 0.53
UBE4B-206ENST00000466379 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
UBE4B-206ENST00000466379 KNSTRNQ9Y448 316 aa18.35■□□□□ 0.53
UBE4B-206ENST00000466379 BCANQ96GW7 911 aa18.34■□□□□ 0.53
UBE4B-206ENST00000466379 STAG3Q9UJ98 1225 aa18.34■□□□□ 0.53
UBE4B-206ENST00000466379 LRPPRCP42704 1394 aaKnown RBP18.32■□□□□ 0.52
UBE4B-206ENST00000466379 SBNO2Q9Y2G9 1366 aa18.32■□□□□ 0.52
UBE4B-206ENST00000466379 SPATA31D1Q6ZQQ2 1576 aa18.32■□□□□ 0.52
UBE4B-206ENST00000466379 ZFYVE9O95405 1425 aa18.32■□□□□ 0.52
UBE4B-206ENST00000466379 AMER1Q5JTC6 1135 aaPredicted RBP18.32■□□□□ 0.52
UBE4B-206ENST00000466379 ARHGEF28Q8N1W1 1705 aaKnown RBP18.31■□□□□ 0.52
UBE4B-206ENST00000466379 ASXL1Q8IXJ9 1541 aa18.31■□□□□ 0.52
UBE4B-206ENST00000466379 NEFLP07196 543 aa18.31■□□□□ 0.52
UBE4B-206ENST00000466379 STK26Q9P289 416 aa18.3■□□□□ 0.52
UBE4B-206ENST00000466379 ESF1Q9H501 851 aaKnown RBP18.29■□□□□ 0.52
UBE4B-206ENST00000466379 SAFB2Q14151 953 aaKnown RBP eCLIP18.28■□□□□ 0.52
UBE4B-206ENST00000466379 ZMYM3Q14202 1370 aa18.28■□□□□ 0.52
UBE4B-206ENST00000466379 A2ML1A8K2U0 1454 aa18.27■□□□□ 0.52
UBE4B-206ENST00000466379 CARD14Q9BXL6 1004 aa18.27■□□□□ 0.52
UBE4B-206ENST00000466379 PPP2R1AP30153 589 aa18.25■□□□□ 0.51
UBE4B-206ENST00000466379 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
UBE4B-206ENST00000466379 TULP4Q9NRJ4 1543 aa18.24■□□□□ 0.51
UBE4B-206ENST00000466379 SLC12A5Q9H2X9 1139 aa18.24■□□□□ 0.51
UBE4B-206ENST00000466379 ALKQ9UM73 1620 aa18.24■□□□□ 0.51
UBE4B-206ENST00000466379 RIMS2Q9UQ26 1411 aa18.23■□□□□ 0.51
UBE4B-206ENST00000466379 PLPPR3Q6T4P5 718 aa18.23■□□□□ 0.51
UBE4B-206ENST00000466379 TRHP20396 242 aaPredicted RBP18.22■□□□□ 0.51
UBE4B-206ENST00000466379 SALL2Q9Y467 1007 aaPredicted RBP18.22■□□□□ 0.51
UBE4B-206ENST00000466379 YTHDC2Q9H6S0 1430 aaKnown RBP18.21■□□□□ 0.51
UBE4B-206ENST00000466379 DAXXQ9UER7 740 aaPredicted RBP18.21■□□□□ 0.51
UBE4B-206ENST00000466379 NPC1L1Q9UHC9 1359 aa18.2■□□□□ 0.5
UBE4B-206ENST00000466379 CABP2Q9NPB3 220 aa18.2■□□□□ 0.5
UBE4B-206ENST00000466379 EVC2Q86UK5 1308 aa18.2■□□□□ 0.5
UBE4B-206ENST00000466379 PTPRMP28827 1452 aa18.2■□□□□ 0.5
UBE4B-206ENST00000466379 NSD3Q9BZ95 1437 aa18.19■□□□□ 0.5
UBE4B-206ENST00000466379 PRAM1Q96QH2 718 aa18.19■□□□□ 0.5
UBE4B-206ENST00000466379 SMG6Q86US8 1419 aaKnown RBP18.19■□□□□ 0.5
UBE4B-206ENST00000466379 MINK1Q8N4C8 1332 aaPredicted RBP18.18■□□□□ 0.5
UBE4B-206ENST00000466379 TNRQ92752 1358 aa18.18■□□□□ 0.5
UBE4B-206ENST00000466379 NUDCQ9Y266 331 aa18.18■□□□□ 0.5
UBE4B-206ENST00000466379 POGKQ9P215 609 aa18.16■□□□□ 0.5
UBE4B-206ENST00000466379 BLMP54132 1417 aaPredicted RBP18.16■□□□□ 0.5
UBE4B-206ENST00000466379 CEBPAP49715 358 aaPredicted RBP18.15■□□□□ 0.5
UBE4B-206ENST00000466379 ADAMTS8Q9UP79 889 aa18.15■□□□□ 0.5
UBE4B-206ENST00000466379 SETD1AO15047 1707 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms