RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 ZFYVE9O95405 1425 aa33.19■■■□□ 2.9
EDEM1-205ENST00000465187 MED1Q15648 1581 aaPredicted RBP33.18■■■□□ 2.9
EDEM1-205ENST00000465187 RBM33Q96EV2 1170 aaKnown RBP33.17■■■□□ 2.9
EDEM1-205ENST00000465187 RIMS2Q9UQ26 1411 aa33.13■■■□□ 2.89
EDEM1-205ENST00000465187 NUP155O75694 1391 aa33.12■■■□□ 2.89
EDEM1-205ENST00000465187 NWD1Q149M9 1564 aa33.12■■■□□ 2.89
EDEM1-205ENST00000465187 TMEM94Q12767 1356 aa33.1■■■□□ 2.89
EDEM1-205ENST00000465187 CHGAP10645 457 aaKnown RBP33.09■■■□□ 2.89
EDEM1-205ENST00000465187 KCNA6P17658 529 aa33.09■■■□□ 2.89
EDEM1-205ENST00000465187 NUTM2DQ5VT03 806 aaPredicted RBP33.09■■■□□ 2.89
EDEM1-205ENST00000465187 BCANQ96GW7 911 aa33.08■■■□□ 2.89
EDEM1-205ENST00000465187 CHD2O14647 1828 aaKnown RBP33.07■■■□□ 2.89
EDEM1-205ENST00000465187 PLEKHG1Q9ULL1 1385 aa33.06■■■□□ 2.88
EDEM1-205ENST00000465187 RRBP1Q9P2E9 1410 aaKnown RBP33.05■■■□□ 2.88
EDEM1-205ENST00000465187 SOCS7O14512 581 aa33.04■■■□□ 2.88
EDEM1-205ENST00000465187 SPHKAPQ2M3C7 1700 aa33.03■■■□□ 2.88
EDEM1-205ENST00000465187 PROSER2Q86WR7 435 aaPredicted RBP33.03■■■□□ 2.88
EDEM1-205ENST00000465187 PPP1R15AO75807 674 aaPredicted RBP33.01■■■□□ 2.87
EDEM1-205ENST00000465187 NKTRP30414 1462 aaKnown RBP33■■■□□ 2.87
EDEM1-205ENST00000465187 ADAMTS13Q76LX8 1427 aa32.98■■■□□ 2.87
EDEM1-205ENST00000465187 ROBO1Q9Y6N7 1651 aa32.97■■■□□ 2.87
EDEM1-205ENST00000465187 NAIPQ13075 1403 aa32.94■■■□□ 2.86
EDEM1-205ENST00000465187 CLTCL1P53675 1640 aa32.91■■■□□ 2.86
EDEM1-205ENST00000465187 NRXN3Q9Y4C0 1643 aa32.9■■■□□ 2.86
EDEM1-205ENST00000465187 FAM135BQ49AJ0 1406 aa32.89■■■□□ 2.86
EDEM1-205ENST00000465187 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.88■■■□□ 2.85
EDEM1-205ENST00000465187 TBX22Q9Y458 520 aa32.88■■■□□ 2.85
EDEM1-205ENST00000465187 HDGFP51858 240 aaKnown RBP32.87■■■□□ 2.85
EDEM1-205ENST00000465187 DIP2AQ14689 1571 aa32.87■■■□□ 2.85
EDEM1-205ENST00000465187 PTPRUQ92729 1446 aa32.85■■■□□ 2.85
EDEM1-205ENST00000465187 MSH6P52701 1360 aa32.83■■■□□ 2.85
EDEM1-205ENST00000465187 TRPM2O94759 1503 aa32.81■■■□□ 2.84
EDEM1-205ENST00000465187 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.8■■■□□ 2.84
EDEM1-205ENST00000465187 PHF23Q9BUL5 403 aaPredicted RBP32.78■■■□□ 2.84
EDEM1-205ENST00000465187 SETBP1Q9Y6X0 1596 aa32.77■■■□□ 2.84
EDEM1-205ENST00000465187 PHLPP1O60346 1717 aa32.77■■■□□ 2.84
EDEM1-205ENST00000465187 NEXMIFQ5QGS0 1516 aa32.77■■■□□ 2.84
EDEM1-205ENST00000465187 HFM1A2PYH4 1435 aa32.77■■■□□ 2.84
EDEM1-205ENST00000465187 KIF1BO60333 1816 aa32.76■■■□□ 2.83
EDEM1-205ENST00000465187 XRN1Q8IZH2 1706 aaKnown RBP32.75■■■□□ 2.83
EDEM1-205ENST00000465187 ZNF326Q5BKZ1 582 aaKnown RBP32.75■■■□□ 2.83
EDEM1-205ENST00000465187 SLAIN2Q9P270 581 aa32.75■■■□□ 2.83
EDEM1-205ENST00000465187 PIK3R4Q99570 1358 aa32.72■■■□□ 2.83
EDEM1-205ENST00000465187 RGS17Q9UGC6 210 aaPredicted RBP32.72■■■□□ 2.83
EDEM1-205ENST00000465187 AMOTL2Q9Y2J4 779 aa32.72■■■□□ 2.83
EDEM1-205ENST00000465187 TRIM52Q96A61 297 aa32.71■■■□□ 2.83
EDEM1-205ENST00000465187 METP08581 1390 aa32.7■■■□□ 2.82
EDEM1-205ENST00000465187 C14orf37Q86TY3 774 aa32.69■■■□□ 2.82
EDEM1-205ENST00000465187 NCOA3Q9Y6Q9 1424 aa32.67■■■□□ 2.82
EDEM1-205ENST00000465187 COL16A1Q07092 1604 aaPredicted RBP32.66■■■□□ 2.82
EDEM1-205ENST00000465187 SETD1AO15047 1707 aaKnown RBP32.63■■■□□ 2.81
EDEM1-205ENST00000465187 FOXD1Q16676 465 aa32.62■■■□□ 2.81
EDEM1-205ENST00000465187 SLC4A1APQ9BWU0 796 aaKnown RBP32.6■■■□□ 2.81
EDEM1-205ENST00000465187 C19orf44Q9H6X5 657 aa32.6■■■□□ 2.81
EDEM1-205ENST00000465187 PPLO60437 1756 aa32.58■■■□□ 2.81
EDEM1-205ENST00000465187 NALCNQ8IZF0 1738 aa32.57■■■□□ 2.81
EDEM1-205ENST00000465187 ATF3P18847 181 aa32.55■■■□□ 2.8
EDEM1-205ENST00000465187 AHDC1Q5TGY3 1603 aaPredicted RBP32.55■■■□□ 2.8
EDEM1-205ENST00000465187 CADPS2Q86UW7 1296 aa32.54■■■□□ 2.8
EDEM1-205ENST00000465187 POTEAQ6S8J7 498 aa32.51■■■□□ 2.79
EDEM1-205ENST00000465187 JCADQ9P266 1359 aa32.5■■■□□ 2.79
EDEM1-205ENST00000465187 LRP6O75581 1613 aa32.5■■■□□ 2.79
EDEM1-205ENST00000465187 BRINP3Q76B58 766 aa32.49■■■□□ 2.79
EDEM1-205ENST00000465187 MST1RQ04912 1400 aa32.49■■■□□ 2.79
EDEM1-205ENST00000465187 DCCP43146 1447 aa32.47■■■□□ 2.79
EDEM1-205ENST00000465187 ASXL1Q8IXJ9 1541 aa32.46■■■□□ 2.79
EDEM1-205ENST00000465187 SHPRHQ149N8 1683 aa32.46■■■□□ 2.79
EDEM1-205ENST00000465187 ADGRL3Q9HAR2 1447 aa32.44■■■□□ 2.78
EDEM1-205ENST00000465187 NHSL1Q5SYE7 1610 aa32.44■■■□□ 2.78
EDEM1-205ENST00000465187 ROBO2Q9HCK4 1378 aa32.42■■■□□ 2.78
EDEM1-205ENST00000465187 IFT172Q9UG01 1749 aa32.41■■■□□ 2.78
EDEM1-205ENST00000465187 VGFO15240 615 aaPredicted RBP32.4■■■□□ 2.78
EDEM1-205ENST00000465187 DDX17Q92841 729 aaKnown RBP32.4■■■□□ 2.78
EDEM1-205ENST00000465187 MPHOSPH9Q99550 1183 aa32.39■■■□□ 2.78
EDEM1-205ENST00000465187 RPGRIP1LQ68CZ1 1315 aa32.37■■■□□ 2.77
EDEM1-205ENST00000465187 PTCH1Q13635 1447 aa32.36■■■□□ 2.77
EDEM1-205ENST00000465187 SPATA31E1Q6ZUB1 1445 aa32.36■■■□□ 2.77
EDEM1-205ENST00000465187 ADGRF5Q8IZF2 1346 aa32.36■■■□□ 2.77
EDEM1-205ENST00000465187 CCDC144AA2RUR9 1427 aa32.34■■■□□ 2.77
EDEM1-205ENST00000465187 RGL3Q3MIN7 710 aa32.34■■■□□ 2.77
EDEM1-205ENST00000465187 SPATA31A6Q5VVP1 1343 aa32.31■■■□□ 2.76
EDEM1-205ENST00000465187 C1orf167Q5SNV9 1468 aa32.3■■■□□ 2.76
EDEM1-205ENST00000465187 PRAG1Q86YV5 1406 aa32.29■■■□□ 2.76
EDEM1-205ENST00000465187 SETD5Q9C0A6 1442 aa32.27■■■□□ 2.76
EDEM1-205ENST00000465187 NUTM2BA6NNL0 878 aaPredicted RBP32.27■■■□□ 2.76
EDEM1-205ENST00000465187 NUTM2EB1AL46 878 aaPredicted RBP32.27■■■□□ 2.76
EDEM1-205ENST00000465187 NUTM2AQ8IVF1 878 aaPredicted RBP32.27■■■□□ 2.76
EDEM1-205ENST00000465187 MEX3CQ5U5Q3 659 aaKnown RBP32.24■■■□□ 2.75
EDEM1-205ENST00000465187 ORAI2Q96SN7 254 aa32.23■■■□□ 2.75
EDEM1-205ENST00000465187 LAMC1P11047 1609 aa32.22■■■□□ 2.75
EDEM1-205ENST00000465187 RAB3GAP2Q9H2M9 1393 aa32.19■■■□□ 2.74
EDEM1-205ENST00000465187 TMEM132EQ6IEE7 984 aa32.19■■■□□ 2.74
EDEM1-205ENST00000465187 STK26Q9P289 416 aa32.19■■■□□ 2.74
EDEM1-205ENST00000465187 PNPLA6Q8IY17 1366 aa32.19■■■□□ 2.74
EDEM1-205ENST00000465187 PIK3C2GO75747 1445 aa32.18■■■□□ 2.74
EDEM1-205ENST00000465187 KNDC1Q76NI1 1749 aa32.17■■■□□ 2.74
EDEM1-205ENST00000465187 WAPLQ7Z5K2 1190 aa32.16■■■□□ 2.74
EDEM1-205ENST00000465187 ANKRD30BQ9BXX2 1392 aa32.16■■■□□ 2.74
EDEM1-205ENST00000465187 PLEKHH1Q9ULM0 1364 aa32.16■■■□□ 2.74
EDEM1-205ENST00000465187 CDC42BPGQ6DT37 1551 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms