RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ZPR1O75312 459 aa12.3□□□□□ -0.44
UBR4-209ENST00000465036 OATP04181 439 aa12.3□□□□□ -0.44
UBR4-209ENST00000465036 HIC1Q14526 733 aa12.3□□□□□ -0.44
UBR4-209ENST00000465036 TMUB1Q9BVT8 246 aa12.3□□□□□ -0.44
UBR4-209ENST00000465036 GGCXP38435 758 aa12.29□□□□□ -0.44
UBR4-209ENST00000465036 PCDHB3Q9Y5E6 796 aa12.29□□□□□ -0.44
UBR4-209ENST00000465036 COPS2P61201 443 aa12.28□□□□□ -0.44
UBR4-209ENST00000465036 NKX2-3Q8TAU0 364 aa12.28□□□□□ -0.44
UBR4-209ENST00000465036 PRKD2Q9BZL6 878 aa12.28□□□□□ -0.44
UBR4-209ENST00000465036 PXYLP1Q8TE99 480 aa12.27□□□□□ -0.45
UBR4-209ENST00000465036 ACTN4O43707 911 aaKnown RBP12.26□□□□□ -0.45
UBR4-209ENST00000465036 KMT5BQ4FZB7 885 aa12.26□□□□□ -0.45
UBR4-209ENST00000465036 FAM161AQ3B820 660 aa12.24□□□□□ -0.45
UBR4-209ENST00000465036 BLOC1S3Q6QNY0 202 aa12.23□□□□□ -0.45
UBR4-209ENST00000465036 RBM26Q5T8P6 1007 aaKnown RBP12.22□□□□□ -0.45
UBR4-209ENST00000465036 Q6ZNB5 142 aa12.22□□□□□ -0.45
UBR4-209ENST00000465036 SLC10A3P09131 477 aa12.21□□□□□ -0.45
UBR4-209ENST00000465036 METTL3Q86U44 580 aaKnown RBP12.21□□□□□ -0.45
UBR4-209ENST00000465036 GNPATO15228 680 aa12.2□□□□□ -0.46
UBR4-209ENST00000465036 GFRA3O60609 400 aa12.2□□□□□ -0.46
UBR4-209ENST00000465036 CFHP08603 1231 aa12.2□□□□□ -0.46
UBR4-209ENST00000465036 GPR37O15354 613 aa12.19□□□□□ -0.46
UBR4-209ENST00000465036 RSPH4AQ5TD94 716 aa12.19□□□□□ -0.46
UBR4-209ENST00000465036 NRG2O14511 850 aaPredicted RBP12.18□□□□□ -0.46
UBR4-209ENST00000465036 NR1I2O75469 434 aa12.15□□□□□ -0.46
UBR4-209ENST00000465036 RNF223E7ERA6 249 aa12.14□□□□□ -0.47
UBR4-209ENST00000465036 FECHP22830 423 aa12.13□□□□□ -0.47
UBR4-209ENST00000465036 HAP1P54257 671 aaPredicted RBP12.13□□□□□ -0.47
UBR4-209ENST00000465036 DAXXQ9UER7 740 aaPredicted RBP12.13□□□□□ -0.47
UBR4-209ENST00000465036 ANKLE1Q8NAG6 615 aa12.12□□□□□ -0.47
UBR4-209ENST00000465036 TRAF7Q6Q0C0 670 aa12.11□□□□□ -0.47
UBR4-209ENST00000465036 KDM2AQ9Y2K7 1162 aa12.11□□□□□ -0.47
UBR4-209ENST00000465036 TLL1O43897 1013 aa12.1□□□□□ -0.47
UBR4-209ENST00000465036 ADH1BP00325 375 aa12.1□□□□□ -0.47
UBR4-209ENST00000465036 LCE2BO14633 110 aa12.09□□□□□ -0.47
UBR4-209ENST00000465036 SCUBE3Q8IX30 993 aa12.09□□□□□ -0.47
UBR4-209ENST00000465036 SLC19A1P41440 591 aa12.08□□□□□ -0.48
UBR4-209ENST00000465036 EMID1Q96A84 441 aaPredicted RBP12.07□□□□□ -0.48
UBR4-209ENST00000465036 PDZRN3Q9UPQ7 1066 aa12.07□□□□□ -0.48
UBR4-209ENST00000465036 S1PR4O95977 384 aa12.06□□□□□ -0.48
UBR4-209ENST00000465036 GPIHBP1Q8IV16 184 aa12.06□□□□□ -0.48
UBR4-209ENST00000465036 SULF1Q8IWU6 871 aa12.05□□□□□ -0.48
UBR4-209ENST00000465036 VSIG10Q8N0Z9 540 aa12.05□□□□□ -0.48
UBR4-209ENST00000465036 SPRYD7Q5W111 196 aa12.04□□□□□ -0.48
UBR4-209ENST00000465036 SLC6A16Q9GZN6 736 aa12.04□□□□□ -0.48
UBR4-209ENST00000465036 ZNF598Q86UK7 904 aaKnown RBP12.03□□□□□ -0.48
UBR4-209ENST00000465036 TRIM67Q6ZTA4 783 aa12.02□□□□□ -0.49
UBR4-209ENST00000465036 RDH13Q8NBN7 331 aa12.02□□□□□ -0.49
UBR4-209ENST00000465036 PHOX2BQ99453 314 aa12.02□□□□□ -0.49
UBR4-209ENST00000465036 GCGRP47871 477 aa12.01□□□□□ -0.49
UBR4-209ENST00000465036 PRR20EP86478 221 aa12.01□□□□□ -0.49
UBR4-209ENST00000465036 PRR20CP86479 221 aa12.01□□□□□ -0.49
UBR4-209ENST00000465036 PRR20DP86480 221 aa12.01□□□□□ -0.49
UBR4-209ENST00000465036 PRR20BP86481 221 aa12.01□□□□□ -0.49
UBR4-209ENST00000465036 PRR20AP86496 221 aa12.01□□□□□ -0.49
UBR4-209ENST00000465036 MORN1Q5T089 497 aa12.01□□□□□ -0.49
UBR4-209ENST00000465036 SPSB2Q99619 263 aa12.01□□□□□ -0.49
UBR4-209ENST00000465036 DDX11L8A8MPP1 907 aa12□□□□□ -0.49
UBR4-209ENST00000465036 ATP6V1AP38606 617 aa12□□□□□ -0.49
UBR4-209ENST00000465036 PUS10Q3MIT2 529 aaKnown RBP12□□□□□ -0.49
UBR4-209ENST00000465036 SALL2Q9Y467 1007 aaPredicted RBP12□□□□□ -0.49
UBR4-209ENST00000465036 PPEF1O14829 653 aaPredicted RBP11.99□□□□□ -0.49
UBR4-209ENST00000465036 LIAT1Q6ZQX7 453 aa11.99□□□□□ -0.49
UBR4-209ENST00000465036 FUT2Q10981 343 aa11.98□□□□□ -0.49
UBR4-209ENST00000465036 THAP11Q96EK4 314 aa11.98□□□□□ -0.49
UBR4-209ENST00000465036 TULP1O00294 542 aaPredicted RBP11.97□□□□□ -0.49
UBR4-209ENST00000465036 MAP2K5Q13163 448 aa11.96□□□□□ -0.49
UBR4-209ENST00000465036 NLRP7Q8WX94 980 aa11.95□□□□□ -0.5
UBR4-209ENST00000465036 FMNL1O95466 1100 aaPredicted RBP11.93□□□□□ -0.5
UBR4-209ENST00000465036 GRIPAP1Q4V328 841 aa11.93□□□□□ -0.5
UBR4-209ENST00000465036 PLA2G2CQ5R387 149 aa11.93□□□□□ -0.5
UBR4-209ENST00000465036 ZNF697Q5TEC3 545 aa11.93□□□□□ -0.5
UBR4-209ENST00000465036 SLC27A5Q9Y2P5 690 aa11.93□□□□□ -0.5
UBR4-209ENST00000465036 GDF9O60383 454 aa11.92□□□□□ -0.5
UBR4-209ENST00000465036 DGAT1O75907 488 aa11.92□□□□□ -0.5
UBR4-209ENST00000465036 LMOD2Q6P5Q4 547 aa11.92□□□□□ -0.5
UBR4-209ENST00000465036 MINK1Q8N4C8 1332 aaPredicted RBP11.91□□□□□ -0.5
UBR4-209ENST00000465036 IRF6O14896 467 aa11.91□□□□□ -0.5
UBR4-209ENST00000465036 RPIAP49247 311 aa11.91□□□□□ -0.5
UBR4-209ENST00000465036 BRICD5Q6PL45 260 aa11.91□□□□□ -0.5
UBR4-209ENST00000465036 CD46P15529 392 aa11.9□□□□□ -0.5
UBR4-209ENST00000465036 FAM160A2Q8N612 972 aaPredicted RBP11.9□□□□□ -0.5
UBR4-209ENST00000465036 MSS51Q4VC12 460 aa11.88□□□□□ -0.51
UBR4-209ENST00000465036 PKDCCQ504Y2 493 aa11.87□□□□□ -0.51
UBR4-209ENST00000465036 Q3C1V9 767 aa11.85□□□□□ -0.51
UBR4-209ENST00000465036 MYT1Q01538 1121 aa11.84□□□□□ -0.51
UBR4-209ENST00000465036 FCF1Q9Y324 198 aaKnown RBP11.84□□□□□ -0.51
UBR4-209ENST00000465036 CD2BP2O95400 341 aaKnown RBP11.83□□□□□ -0.52
UBR4-209ENST00000465036 USP46P62068 366 aa11.83□□□□□ -0.52
UBR4-209ENST00000465036 ZNF787Q6DD87 383 aa11.83□□□□□ -0.52
UBR4-209ENST00000465036 PKD2L1Q9P0L9 805 aa11.83□□□□□ -0.52
UBR4-209ENST00000465036 KDM4AO75164 1064 aa11.82□□□□□ -0.52
UBR4-209ENST00000465036 RNF19BQ6ZMZ0 732 aa11.82□□□□□ -0.52
UBR4-209ENST00000465036 TNFRSF10AO00220 468 aa11.81□□□□□ -0.52
UBR4-209ENST00000465036 MMP16P51512 607 aa11.8□□□□□ -0.52
UBR4-209ENST00000465036 MDM2Q00987 491 aaPredicted RBP11.79□□□□□ -0.52
UBR4-209ENST00000465036 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.79□□□□□ -0.52
UBR4-209ENST00000465036 CCDC102AQ96A19 550 aa11.79□□□□□ -0.52
UBR4-209ENST00000465036 CLCN1P35523 988 aa11.78□□□□□ -0.52
UBR4-209ENST00000465036 PRDM9Q9NQV7 894 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms