RNA–Protein interactions for RNA: ENST00000465027.1

COPS6-205, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 1 (best)

Gene COPS6, Length 1,171 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-205ENST00000465027 NOS1P29475 1434 aa25.94■■□□□ 1.74
COPS6-205ENST00000465027 JCADQ9P266 1359 aa25.92■■□□□ 1.74
COPS6-205ENST00000465027 LRP6O75581 1613 aa25.89■■□□□ 1.74
COPS6-205ENST00000465027 COL16A1Q07092 1604 aaPredicted RBP25.88■■□□□ 1.73
COPS6-205ENST00000465027 ANKRD30AQ9BXX3 1397 aa25.87■■□□□ 1.73
COPS6-205ENST00000465027 MYO5BQ9ULV0 1848 aa25.86■■□□□ 1.73
COPS6-205ENST00000465027 ZFYVE9O95405 1425 aa25.85■■□□□ 1.73
COPS6-205ENST00000465027 FGD6Q6ZV73 1430 aa25.85■■□□□ 1.73
COPS6-205ENST00000465027 CHD2O14647 1828 aaKnown RBP25.84■■□□□ 1.73
COPS6-205ENST00000465027 TRIM52Q96A61 297 aa25.83■■□□□ 1.73
COPS6-205ENST00000465027 SLC52A1Q9NWF4 448 aa25.83■■□□□ 1.73
COPS6-205ENST00000465027 PLEKHG1Q9ULL1 1385 aa25.82■■□□□ 1.72
COPS6-205ENST00000465027 RIMS2Q9UQ26 1411 aa25.82■■□□□ 1.72
COPS6-205ENST00000465027 PPP1R15AO75807 674 aaPredicted RBP25.81■■□□□ 1.72
COPS6-205ENST00000465027 MEX3CQ5U5Q3 659 aaKnown RBP25.8■■□□□ 1.72
COPS6-205ENST00000465027 UPF1Q92900 1129 aaKnown RBP eCLIP25.8■■□□□ 1.72
COPS6-205ENST00000465027 GCC2Q8IWJ2 1684 aa25.8■■□□□ 1.72
COPS6-205ENST00000465027 NUTM2DQ5VT03 806 aaPredicted RBP25.79■■□□□ 1.72
COPS6-205ENST00000465027 C14orf37Q86TY3 774 aa25.78■■□□□ 1.72
COPS6-205ENST00000465027 TMEM131LA2VDJ0 1609 aa25.76■■□□□ 1.71
COPS6-205ENST00000465027 SPATA31A6Q5VVP1 1343 aa25.75■■□□□ 1.71
COPS6-205ENST00000465027 CHGAP10645 457 aaKnown RBP25.74■■□□□ 1.71
COPS6-205ENST00000465027 TBX22Q9Y458 520 aa25.74■■□□□ 1.71
COPS6-205ENST00000465027 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.74■■□□□ 1.71
COPS6-205ENST00000465027 RPRD2Q5VT52 1461 aaKnown RBP25.72■■□□□ 1.71
COPS6-205ENST00000465027 ADAMTS13Q76LX8 1427 aa25.72■■□□□ 1.71
COPS6-205ENST00000465027 APLP2Q06481 763 aa25.72■■□□□ 1.71
COPS6-205ENST00000465027 ZNF772Q68DY9 489 aaPredicted RBP25.72■■□□□ 1.71
COPS6-205ENST00000465027 AHDC1Q5TGY3 1603 aaPredicted RBP25.72■■□□□ 1.71
COPS6-205ENST00000465027 ADGRL2O95490 1459 aa25.72■■□□□ 1.71
COPS6-205ENST00000465027 NUTM2BA6NNL0 878 aaPredicted RBP25.7■■□□□ 1.7
COPS6-205ENST00000465027 NUTM2EB1AL46 878 aaPredicted RBP25.7■■□□□ 1.7
COPS6-205ENST00000465027 NUTM2AQ8IVF1 878 aaPredicted RBP25.7■■□□□ 1.7
COPS6-205ENST00000465027 SHPRHQ149N8 1683 aa25.7■■□□□ 1.7
COPS6-205ENST00000465027 ANKRD50Q9ULJ7 1429 aa25.7■■□□□ 1.7
COPS6-205ENST00000465027 NCOA3Q9Y6Q9 1424 aa25.69■■□□□ 1.7
COPS6-205ENST00000465027 ATF3P18847 181 aa25.68■■□□□ 1.7
COPS6-205ENST00000465027 CADPS2Q86UW7 1296 aa25.68■■□□□ 1.7
COPS6-205ENST00000465027 HDGFP51858 240 aaKnown RBP25.67■■□□□ 1.7
COPS6-205ENST00000465027 FAM50AQ14320 339 aaKnown RBP25.67■■□□□ 1.7
COPS6-205ENST00000465027 C19orf44Q9H6X5 657 aa25.67■■□□□ 1.7
COPS6-205ENST00000465027 DIP2AQ14689 1571 aa25.65■■□□□ 1.7
COPS6-205ENST00000465027 RXRBP28702 533 aa25.65■■□□□ 1.7
COPS6-205ENST00000465027 BRINP3Q76B58 766 aa25.65■■□□□ 1.7
COPS6-205ENST00000465027 PTPRUQ92729 1446 aa25.64■■□□□ 1.7
COPS6-205ENST00000465027 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.63■■□□□ 1.69
COPS6-205ENST00000465027 AMOTL2Q9Y2J4 779 aa25.62■■□□□ 1.69
COPS6-205ENST00000465027 E9PCH4 1651 aa25.61■■□□□ 1.69
COPS6-205ENST00000465027 AFF2P51816 1311 aa25.61■■□□□ 1.69
COPS6-205ENST00000465027 PIK3R4Q99570 1358 aa25.58■■□□□ 1.69
COPS6-205ENST00000465027 UNC13BO14795 1591 aa25.58■■□□□ 1.69
COPS6-205ENST00000465027 TRPM2O94759 1503 aa25.57■■□□□ 1.68
COPS6-205ENST00000465027 ASXL1Q8IXJ9 1541 aa25.57■■□□□ 1.68
COPS6-205ENST00000465027 DDX17Q92841 729 aaKnown RBP25.56■■□□□ 1.68
COPS6-205ENST00000465027 CDK12Q9NYV4 1490 aaPredicted RBP25.54■■□□□ 1.68
COPS6-205ENST00000465027 MST1RQ04912 1400 aa25.53■■□□□ 1.68
COPS6-205ENST00000465027 RGS12O14924 1447 aa25.52■■□□□ 1.68
COPS6-205ENST00000465027 C8orf37Q96NL8 207 aa25.51■■□□□ 1.67
COPS6-205ENST00000465027 SETD5Q9C0A6 1442 aa25.51■■□□□ 1.67
COPS6-205ENST00000465027 NRXN3Q9Y4C0 1643 aa25.51■■□□□ 1.67
COPS6-205ENST00000465027 NHSL1Q5SYE7 1610 aa25.5■■□□□ 1.67
COPS6-205ENST00000465027 XRN1Q8IZH2 1706 aaKnown RBP25.5■■□□□ 1.67
COPS6-205ENST00000465027 DCCP43146 1447 aa25.49■■□□□ 1.67
COPS6-205ENST00000465027 QTRT2Q9H974 415 aaKnown RBP25.47■■□□□ 1.67
COPS6-205ENST00000465027 IQGAP3Q86VI3 1631 aa25.47■■□□□ 1.67
COPS6-205ENST00000465027 PNPLA6Q8IY17 1366 aa25.46■■□□□ 1.67
COPS6-205ENST00000465027 METP08581 1390 aa25.45■■□□□ 1.67
COPS6-205ENST00000465027 LRRC59Q96AG4 307 aaKnown RBP25.44■■□□□ 1.66
COPS6-205ENST00000465027 NUP155O75694 1391 aa25.44■■□□□ 1.66
COPS6-205ENST00000465027 RBM6P78332 1123 aaKnown RBP25.43■■□□□ 1.66
COPS6-205ENST00000465027 SETBP1Q9Y6X0 1596 aa25.42■■□□□ 1.66
COPS6-205ENST00000465027 ADAMTS2O95450 1211 aa25.41■■□□□ 1.66
COPS6-205ENST00000465027 ADGRL3Q9HAR2 1447 aa25.39■■□□□ 1.66
COPS6-205ENST00000465027 NALCNQ8IZF0 1738 aa25.39■■□□□ 1.65
COPS6-205ENST00000465027 ZNF326Q5BKZ1 582 aaKnown RBP25.38■■□□□ 1.65
COPS6-205ENST00000465027 NGLY1Q96IV0 654 aa25.37■■□□□ 1.65
COPS6-205ENST00000465027 SRCAPQ6ZRS2 3230 aa25.37■■□□□ 1.65
COPS6-205ENST00000465027 ROCK1Q13464 1354 aa25.36■■□□□ 1.65
COPS6-205ENST00000465027 ITGAEP38570 1179 aa25.35■■□□□ 1.65
COPS6-205ENST00000465027 C1orf167Q5SNV9 1468 aa25.33■■□□□ 1.65
COPS6-205ENST00000465027 SPHKAPQ2M3C7 1700 aa25.32■■□□□ 1.64
COPS6-205ENST00000465027 ORAI2Q96SN7 254 aa25.31■■□□□ 1.64
COPS6-205ENST00000465027 USP21Q9UK80 565 aa25.29■■□□□ 1.64
COPS6-205ENST00000465027 ATAD2Q6PL18 1390 aa25.29■■□□□ 1.64
COPS6-205ENST00000465027 NEXMIFQ5QGS0 1516 aa25.28■■□□□ 1.64
COPS6-205ENST00000465027 CLTCL1P53675 1640 aa25.26■■□□□ 1.63
COPS6-205ENST00000465027 SOS2Q07890 1332 aaPredicted RBP25.25■■□□□ 1.63
COPS6-205ENST00000465027 LAMC1P11047 1609 aa25.24■■□□□ 1.63
COPS6-205ENST00000465027 ROBO2Q9HCK4 1378 aa25.24■■□□□ 1.63
COPS6-205ENST00000465027 TRPC5Q9UL62 973 aaPredicted RBP25.23■■□□□ 1.63
COPS6-205ENST00000465027 ATRNO75882 1429 aa25.21■■□□□ 1.63
COPS6-205ENST00000465027 FNBP4Q8N3X1 1017 aaPredicted RBP25.21■■□□□ 1.63
COPS6-205ENST00000465027 PTCH1Q13635 1447 aa25.19■■□□□ 1.62
COPS6-205ENST00000465027 ZRANB1Q9UGI0 708 aa25.18■■□□□ 1.62
COPS6-205ENST00000465027 PPARGC1BQ86YN6 1023 aaKnown RBP25.17■■□□□ 1.62
COPS6-205ENST00000465027 XPCQ01831 940 aaPredicted RBP25.15■■□□□ 1.62
COPS6-205ENST00000465027 COL22A1Q8NFW1 1626 aaPredicted RBP25.15■■□□□ 1.62
COPS6-205ENST00000465027 EP400Q96L91 3159 aa25.14■■□□□ 1.61
COPS6-205ENST00000465027 MYOM2P54296 1465 aa25.14■■□□□ 1.61
COPS6-205ENST00000465027 BCL9LQ86UU0 1499 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms