RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 GGCXP38435 758 aa8.32□□□□□ -1.08
GARNL3-213ENST00000464616 FAM161AQ3B820 660 aa8.32□□□□□ -1.08
GARNL3-213ENST00000464616 TJAP1Q5JTD0 557 aa8.32□□□□□ -1.08
GARNL3-213ENST00000464616 VSIG10Q8N0Z9 540 aa8.32□□□□□ -1.08
GARNL3-213ENST00000464616 PCDHB3Q9Y5E6 796 aa8.31□□□□□ -1.08
GARNL3-213ENST00000464616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.3□□□□□ -1.08
GARNL3-213ENST00000464616 TMEM134Q9H6X4 195 aa8.3□□□□□ -1.08
GARNL3-213ENST00000464616 GNPATO15228 680 aa8.29□□□□□ -1.08
GARNL3-213ENST00000464616 GPIHBP1Q8IV16 184 aa8.29□□□□□ -1.08
GARNL3-213ENST00000464616 ZNF516Q92618 1163 aa8.28□□□□□ -1.08
GARNL3-213ENST00000464616 KDM2AQ9Y2K7 1162 aa8.28□□□□□ -1.08
GARNL3-213ENST00000464616 CFHP08603 1231 aa8.26□□□□□ -1.09
GARNL3-213ENST00000464616 PPP1R18Q6NYC8 613 aa8.26□□□□□ -1.09
GARNL3-213ENST00000464616 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.26□□□□□ -1.09
GARNL3-213ENST00000464616 PXYLP1Q8TE99 480 aa8.25□□□□□ -1.09
GARNL3-213ENST00000464616 ZPR1O75312 459 aa8.24□□□□□ -1.09
GARNL3-213ENST00000464616 METTL3Q86U44 580 aaKnown RBP8.24□□□□□ -1.09
GARNL3-213ENST00000464616 RDH13Q8NBN7 331 aa8.24□□□□□ -1.09
GARNL3-213ENST00000464616 PRKD2Q9BZL6 878 aa8.24□□□□□ -1.09
GARNL3-213ENST00000464616 BLOC1S3Q6QNY0 202 aa8.23□□□□□ -1.09
GARNL3-213ENST00000464616 NKX2-3Q8TAU0 364 aa8.23□□□□□ -1.09
GARNL3-213ENST00000464616 ACTN4O43707 911 aaKnown RBP8.22□□□□□ -1.09
GARNL3-213ENST00000464616 NR1I2O75469 434 aa8.22□□□□□ -1.09
GARNL3-213ENST00000464616 FECHP22830 423 aa8.21□□□□□ -1.1
GARNL3-213ENST00000464616 Q6ZNB5 142 aa8.21□□□□□ -1.1
GARNL3-213ENST00000464616 DDX11L8A8MPP1 907 aa8.2□□□□□ -1.1
GARNL3-213ENST00000464616 LAPTM4AQ15012 233 aa8.2□□□□□ -1.1
GARNL3-213ENST00000464616 SULF1Q8IWU6 871 aa8.2□□□□□ -1.1
GARNL3-213ENST00000464616 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
GARNL3-213ENST00000464616 DAXXQ9UER7 740 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-213ENST00000464616 SLC10A3P09131 477 aa8.18□□□□□ -1.1
GARNL3-213ENST00000464616 V9GY48 417 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-213ENST00000464616 GFRA3O60609 400 aa8.17□□□□□ -1.1
GARNL3-213ENST00000464616 KRI1Q8N9T8 703 aaKnown RBP8.16□□□□□ -1.1
GARNL3-213ENST00000464616 TLL1O43897 1013 aa8.15□□□□□ -1.1
GARNL3-213ENST00000464616 PUS10Q3MIT2 529 aaKnown RBP8.15□□□□□ -1.1
GARNL3-213ENST00000464616 NLRP7Q8WX94 980 aa8.15□□□□□ -1.1
GARNL3-213ENST00000464616 GPR37O15354 613 aa8.14□□□□□ -1.11
GARNL3-213ENST00000464616 ADH1BP00325 375 aa8.14□□□□□ -1.11
GARNL3-213ENST00000464616 GRIPAP1Q4V328 841 aa8.14□□□□□ -1.11
GARNL3-213ENST00000464616 MAP2K5Q13163 448 aa8.13□□□□□ -1.11
GARNL3-213ENST00000464616 SCUBE3Q8IX30 993 aa8.13□□□□□ -1.11
GARNL3-213ENST00000464616 SLC6A16Q9GZN6 736 aa8.13□□□□□ -1.11
GARNL3-213ENST00000464616 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
GARNL3-213ENST00000464616 S1PR4O95977 384 aa8.12□□□□□ -1.11
GARNL3-213ENST00000464616 ATP6V1AP38606 617 aa8.12□□□□□ -1.11
GARNL3-213ENST00000464616 SLC19A1P41440 591 aa8.12□□□□□ -1.11
GARNL3-213ENST00000464616 FUT2Q10981 343 aa8.11□□□□□ -1.11
GARNL3-213ENST00000464616 SPSB2Q99619 263 aa8.11□□□□□ -1.11
GARNL3-213ENST00000464616 PDZRN3Q9UPQ7 1066 aa8.11□□□□□ -1.11
GARNL3-213ENST00000464616 PPEF1O14829 653 aaPredicted RBP8.1□□□□□ -1.11
GARNL3-213ENST00000464616 ANKLE1Q8NAG6 615 aa8.1□□□□□ -1.11
GARNL3-213ENST00000464616 MINK1Q8N4C8 1332 aaPredicted RBP8.09□□□□□ -1.11
GARNL3-213ENST00000464616 NRG2O14511 850 aaPredicted RBP8.09□□□□□ -1.11
GARNL3-213ENST00000464616 IRF6O14896 467 aa8.09□□□□□ -1.11
GARNL3-213ENST00000464616 FMNL1O95466 1100 aaPredicted RBP8.09□□□□□ -1.11
GARNL3-213ENST00000464616 GCGRP47871 477 aa8.09□□□□□ -1.11
GARNL3-213ENST00000464616 MDM2Q00987 491 aaPredicted RBP8.07□□□□□ -1.12
GARNL3-213ENST00000464616 MORN1Q5T089 497 aa8.07□□□□□ -1.12
GARNL3-213ENST00000464616 PHOX2BQ99453 314 aa8.07□□□□□ -1.12
GARNL3-213ENST00000464616 LMOD2Q6P5Q4 547 aa8.05□□□□□ -1.12
GARNL3-213ENST00000464616 TRAF7Q6Q0C0 670 aa8.05□□□□□ -1.12
GARNL3-213ENST00000464616 SLC27A5Q9Y2P5 690 aa8.05□□□□□ -1.12
GARNL3-213ENST00000464616 CLCN1P35523 988 aa8.04□□□□□ -1.12
GARNL3-213ENST00000464616 Q3C1V9 767 aa8.04□□□□□ -1.12
GARNL3-213ENST00000464616 SPRYD7Q5W111 196 aa8.04□□□□□ -1.12
GARNL3-213ENST00000464616 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.04□□□□□ -1.12
GARNL3-213ENST00000464616 ZNF598Q86UK7 904 aaKnown RBP8.04□□□□□ -1.12
GARNL3-213ENST00000464616 CCDC102AQ96A19 550 aa8.04□□□□□ -1.12
GARNL3-213ENST00000464616 ZBTB24O43167 697 aaPredicted RBP8.03□□□□□ -1.12
GARNL3-213ENST00000464616 KDM4AO75164 1064 aa8.03□□□□□ -1.12
GARNL3-213ENST00000464616 ZNF697Q5TEC3 545 aa8.03□□□□□ -1.12
GARNL3-213ENST00000464616 PKDCCQ504Y2 493 aa8.02□□□□□ -1.13
GARNL3-213ENST00000464616 GPCPD1Q9NPB8 672 aa8.02□□□□□ -1.13
GARNL3-213ENST00000464616 CD46P15529 392 aa8.01□□□□□ -1.13
GARNL3-213ENST00000464616 NUTM1Q86Y26 1132 aa8.01□□□□□ -1.13
GARNL3-213ENST00000464616 FCF1Q9Y324 198 aaKnown RBP8.01□□□□□ -1.13
GARNL3-213ENST00000464616 SALL2Q9Y467 1007 aaPredicted RBP8.01□□□□□ -1.13
GARNL3-213ENST00000464616 CD2BP2O95400 341 aaKnown RBP8□□□□□ -1.13
GARNL3-213ENST00000464616 USP46P62068 366 aa8□□□□□ -1.13
GARNL3-213ENST00000464616 LIAT1Q6ZQX7 453 aa8□□□□□ -1.13
GARNL3-213ENST00000464616 TTLL12Q14166 644 aaPredicted RBP7.99□□□□□ -1.13
GARNL3-213ENST00000464616 FOXC1Q12948 553 aa7.98□□□□□ -1.13
GARNL3-213ENST00000464616 BRICD5Q6PL45 260 aa7.98□□□□□ -1.13
GARNL3-213ENST00000464616 THAP11Q96EK4 314 aa7.98□□□□□ -1.13
GARNL3-213ENST00000464616 TNFRSF10AO00220 468 aa7.97□□□□□ -1.13
GARNL3-213ENST00000464616 RNF19BQ6ZMZ0 732 aa7.97□□□□□ -1.13
GARNL3-213ENST00000464616 FAM187AA6NFU0 413 aa7.96□□□□□ -1.14
GARNL3-213ENST00000464616 RPIAP49247 311 aa7.96□□□□□ -1.14
GARNL3-213ENST00000464616 MSS51Q4VC12 460 aa7.96□□□□□ -1.14
GARNL3-213ENST00000464616 FAM160A2Q8N612 972 aaPredicted RBP7.96□□□□□ -1.14
GARNL3-213ENST00000464616 USB1Q9BQ65 265 aaKnown RBP7.96□□□□□ -1.14
GARNL3-213ENST00000464616 PRR20EP86478 221 aa7.95□□□□□ -1.14
GARNL3-213ENST00000464616 PRR20CP86479 221 aa7.95□□□□□ -1.14
GARNL3-213ENST00000464616 PRR20DP86480 221 aa7.95□□□□□ -1.14
GARNL3-213ENST00000464616 PRR20BP86481 221 aa7.95□□□□□ -1.14
GARNL3-213ENST00000464616 PRR20AP86496 221 aa7.95□□□□□ -1.14
GARNL3-213ENST00000464616 PLA2G2CQ5R387 149 aa7.95□□□□□ -1.14
GARNL3-213ENST00000464616 CCDC24Q8N4L8 307 aa7.95□□□□□ -1.14
GARNL3-213ENST00000464616 PRDM9Q9NQV7 894 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms