RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 GCC2Q8IWJ2 1684 aa26.94■■□□□ 1.9
HMGN1-209ENST00000463631 UNC13BO14795 1591 aa26.92■■□□□ 1.9
HMGN1-209ENST00000463631 MYO5BQ9ULV0 1848 aa26.92■■□□□ 1.9
HMGN1-209ENST00000463631 TMEM131LA2VDJ0 1609 aa26.91■■□□□ 1.9
HMGN1-209ENST00000463631 RGS17Q9UGC6 210 aaPredicted RBP26.91■■□□□ 1.9
HMGN1-209ENST00000463631 PLEKHG1Q9ULL1 1385 aa26.9■■□□□ 1.9
HMGN1-209ENST00000463631 PROSER2Q86WR7 435 aaPredicted RBP26.9■■□□□ 1.9
HMGN1-209ENST00000463631 CHD2O14647 1828 aaKnown RBP26.89■■□□□ 1.9
HMGN1-209ENST00000463631 MSH6P52701 1360 aa26.86■■□□□ 1.89
HMGN1-209ENST00000463631 RIMS2Q9UQ26 1411 aa26.85■■□□□ 1.89
HMGN1-209ENST00000463631 FAM50AQ14320 339 aaKnown RBP26.85■■□□□ 1.89
HMGN1-209ENST00000463631 E9PCH4 1651 aa26.82■■□□□ 1.88
HMGN1-209ENST00000463631 DIP2AQ14689 1571 aa26.81■■□□□ 1.88
HMGN1-209ENST00000463631 IQGAP3Q86VI3 1631 aa26.81■■□□□ 1.88
HMGN1-209ENST00000463631 RBM33Q96EV2 1170 aaKnown RBP26.81■■□□□ 1.88
HMGN1-209ENST00000463631 NCOA3Q9Y6Q9 1424 aa26.81■■□□□ 1.88
HMGN1-209ENST00000463631 HDGFP51858 240 aaKnown RBP26.8■■□□□ 1.88
HMGN1-209ENST00000463631 PHLPP1O60346 1717 aa26.79■■□□□ 1.88
HMGN1-209ENST00000463631 ROCK1Q13464 1354 aa26.79■■□□□ 1.88
HMGN1-209ENST00000463631 BCANQ96GW7 911 aa26.78■■□□□ 1.88
HMGN1-209ENST00000463631 PPP1R15AO75807 674 aaPredicted RBP26.77■■□□□ 1.88
HMGN1-209ENST00000463631 SLAIN2Q9P270 581 aa26.76■■□□□ 1.87
HMGN1-209ENST00000463631 TBX22Q9Y458 520 aa26.76■■□□□ 1.87
HMGN1-209ENST00000463631 COL16A1Q07092 1604 aaPredicted RBP26.76■■□□□ 1.87
HMGN1-209ENST00000463631 ADAMTS13Q76LX8 1427 aa26.75■■□□□ 1.87
HMGN1-209ENST00000463631 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.75■■□□□ 1.87
HMGN1-209ENST00000463631 PIK3R4Q99570 1358 aa26.73■■□□□ 1.87
HMGN1-209ENST00000463631 JCADQ9P266 1359 aa26.73■■□□□ 1.87
HMGN1-209ENST00000463631 POTEAQ6S8J7 498 aa26.72■■□□□ 1.87
HMGN1-209ENST00000463631 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.69■■□□□ 1.86
HMGN1-209ENST00000463631 TRPM2O94759 1503 aa26.68■■□□□ 1.86
HMGN1-209ENST00000463631 AHDC1Q5TGY3 1603 aaPredicted RBP26.68■■□□□ 1.86
HMGN1-209ENST00000463631 CHGAP10645 457 aaKnown RBP26.63■■□□□ 1.85
HMGN1-209ENST00000463631 SHPRHQ149N8 1683 aa26.63■■□□□ 1.85
HMGN1-209ENST00000463631 NUP155O75694 1391 aa26.62■■□□□ 1.85
HMGN1-209ENST00000463631 CADPS2Q86UW7 1296 aa26.62■■□□□ 1.85
HMGN1-209ENST00000463631 XRN1Q8IZH2 1706 aaKnown RBP26.62■■□□□ 1.85
HMGN1-209ENST00000463631 NRXN3Q9Y4C0 1643 aa26.61■■□□□ 1.85
HMGN1-209ENST00000463631 C19orf44Q9H6X5 657 aa26.61■■□□□ 1.85
HMGN1-209ENST00000463631 SETBP1Q9Y6X0 1596 aa26.61■■□□□ 1.85
HMGN1-209ENST00000463631 LRP6O75581 1613 aa26.61■■□□□ 1.85
HMGN1-209ENST00000463631 SPHKAPQ2M3C7 1700 aa26.6■■□□□ 1.85
HMGN1-209ENST00000463631 DCCP43146 1447 aa26.6■■□□□ 1.85
HMGN1-209ENST00000463631 SPATA31A6Q5VVP1 1343 aa26.6■■□□□ 1.85
HMGN1-209ENST00000463631 C14orf37Q86TY3 774 aa26.59■■□□□ 1.85
HMGN1-209ENST00000463631 SETD1AO15047 1707 aaKnown RBP26.59■■□□□ 1.85
HMGN1-209ENST00000463631 PTPRUQ92729 1446 aa26.58■■□□□ 1.85
HMGN1-209ENST00000463631 NUTM2DQ5VT03 806 aaPredicted RBP26.58■■□□□ 1.85
HMGN1-209ENST00000463631 ATF3P18847 181 aa26.56■■□□□ 1.84
HMGN1-209ENST00000463631 AMOTL2Q9Y2J4 779 aa26.53■■□□□ 1.84
HMGN1-209ENST00000463631 ASXL1Q8IXJ9 1541 aa26.5■■□□□ 1.83
HMGN1-209ENST00000463631 BRINP3Q76B58 766 aa26.49■■□□□ 1.83
HMGN1-209ENST00000463631 NHSL1Q5SYE7 1610 aa26.49■■□□□ 1.83
HMGN1-209ENST00000463631 MST1RQ04912 1400 aa26.47■■□□□ 1.83
HMGN1-209ENST00000463631 NEXMIFQ5QGS0 1516 aa26.46■■□□□ 1.83
HMGN1-209ENST00000463631 ZNF772Q68DY9 489 aaPredicted RBP26.46■■□□□ 1.83
HMGN1-209ENST00000463631 CLTCL1P53675 1640 aa26.46■■□□□ 1.83
HMGN1-209ENST00000463631 SETD5Q9C0A6 1442 aa26.45■■□□□ 1.82
HMGN1-209ENST00000463631 ITGAEP38570 1179 aa26.44■■□□□ 1.82
HMGN1-209ENST00000463631 ADGRL3Q9HAR2 1447 aa26.44■■□□□ 1.82
HMGN1-209ENST00000463631 METP08581 1390 aa26.44■■□□□ 1.82
HMGN1-209ENST00000463631 MEX3CQ5U5Q3 659 aaKnown RBP26.43■■□□□ 1.82
HMGN1-209ENST00000463631 NALCNQ8IZF0 1738 aa26.42■■□□□ 1.82
HMGN1-209ENST00000463631 CDK12Q9NYV4 1490 aaPredicted RBP26.39■■□□□ 1.82
HMGN1-209ENST00000463631 KIF1BO60333 1816 aa26.39■■□□□ 1.81
HMGN1-209ENST00000463631 ZNF326Q5BKZ1 582 aaKnown RBP26.38■■□□□ 1.81
HMGN1-209ENST00000463631 RRBP1Q9P2E9 1410 aaKnown RBP26.36■■□□□ 1.81
HMGN1-209ENST00000463631 LAMC1P11047 1609 aa26.36■■□□□ 1.81
HMGN1-209ENST00000463631 PTCH1Q13635 1447 aa26.35■■□□□ 1.81
HMGN1-209ENST00000463631 NAIPQ13075 1403 aa26.34■■□□□ 1.81
HMGN1-209ENST00000463631 PRAG1Q86YV5 1406 aa26.34■■□□□ 1.81
HMGN1-209ENST00000463631 LRRC59Q96AG4 307 aaKnown RBP26.31■■□□□ 1.8
HMGN1-209ENST00000463631 RXRBP28702 533 aa26.3■■□□□ 1.8
HMGN1-209ENST00000463631 UPF1Q92900 1129 aaKnown RBP eCLIP26.3■■□□□ 1.8
HMGN1-209ENST00000463631 TRIM52Q96A61 297 aa26.3■■□□□ 1.8
HMGN1-209ENST00000463631 PNPLA6Q8IY17 1366 aa26.3■■□□□ 1.8
HMGN1-209ENST00000463631 NUTM2BA6NNL0 878 aaPredicted RBP26.29■■□□□ 1.8
HMGN1-209ENST00000463631 NUTM2EB1AL46 878 aaPredicted RBP26.29■■□□□ 1.8
HMGN1-209ENST00000463631 NUTM2AQ8IVF1 878 aaPredicted RBP26.29■■□□□ 1.8
HMGN1-209ENST00000463631 AFF2P51816 1311 aa26.28■■□□□ 1.8
HMGN1-209ENST00000463631 C1orf167Q5SNV9 1468 aa26.28■■□□□ 1.8
HMGN1-209ENST00000463631 PPARGC1BQ86YN6 1023 aaKnown RBP26.26■■□□□ 1.79
HMGN1-209ENST00000463631 HFM1A2PYH4 1435 aa26.24■■□□□ 1.79
HMGN1-209ENST00000463631 PPLO60437 1756 aa26.23■■□□□ 1.79
HMGN1-209ENST00000463631 ROBO2Q9HCK4 1378 aa26.22■■□□□ 1.79
HMGN1-209ENST00000463631 VGFO15240 615 aaPredicted RBP26.22■■□□□ 1.79
HMGN1-209ENST00000463631 RPGRIP1LQ68CZ1 1315 aa26.21■■□□□ 1.79
HMGN1-209ENST00000463631 DDX17Q92841 729 aaKnown RBP26.21■■□□□ 1.79
HMGN1-209ENST00000463631 RGS12O14924 1447 aa26.19■■□□□ 1.78
HMGN1-209ENST00000463631 SOS2Q07890 1332 aaPredicted RBP26.18■■□□□ 1.78
HMGN1-209ENST00000463631 CDC42BPGQ6DT37 1551 aa26.17■■□□□ 1.78
HMGN1-209ENST00000463631 C8orf37Q96NL8 207 aa26.17■■□□□ 1.78
HMGN1-209ENST00000463631 COL22A1Q8NFW1 1626 aaPredicted RBP26.17■■□□□ 1.78
HMGN1-209ENST00000463631 RBM6P78332 1123 aaKnown RBP26.15■■□□□ 1.78
HMGN1-209ENST00000463631 QTRT2Q9H974 415 aaKnown RBP26.13■■□□□ 1.77
HMGN1-209ENST00000463631 ORAI2Q96SN7 254 aa26.11■■□□□ 1.77
HMGN1-209ENST00000463631 SLC4A1APQ9BWU0 796 aaKnown RBP26.1■■□□□ 1.77
HMGN1-209ENST00000463631 TECPR2O15040 1411 aa26.08■■□□□ 1.77
HMGN1-209ENST00000463631 NGLY1Q96IV0 654 aa26.08■■□□□ 1.77
HMGN1-209ENST00000463631 MYOM2P54296 1465 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms