RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 CERKQ8TCT0 537 aa26.25■■□□□ 1.79
VPS52-214ENST00000463486 PLEKHG1Q9ULL1 1385 aa26.21■■□□□ 1.79
VPS52-214ENST00000463486 HDGFP51858 240 aaKnown RBP26.2■■□□□ 1.78
VPS52-214ENST00000463486 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.2■■□□□ 1.78
VPS52-214ENST00000463486 NUTM2DQ5VT03 806 aaPredicted RBP26.19■■□□□ 1.78
VPS52-214ENST00000463486 TRIM26Q12899 539 aaPredicted RBP26.18■■□□□ 1.78
VPS52-214ENST00000463486 KIF1BO60333 1816 aa26.18■■□□□ 1.78
VPS52-214ENST00000463486 SLC26A8Q96RN1 970 aa26.17■■□□□ 1.78
VPS52-214ENST00000463486 ANKRD30BQ9BXX2 1392 aa26.17■■□□□ 1.78
VPS52-214ENST00000463486 CCDC144AA2RUR9 1427 aa26.16■■□□□ 1.78
VPS52-214ENST00000463486 SPATA31E1Q6ZUB1 1445 aa26.16■■□□□ 1.78
VPS52-214ENST00000463486 NEXMIFQ5QGS0 1516 aa26.16■■□□□ 1.78
VPS52-214ENST00000463486 STRCP1A6NGW2 1772 aa26.15■■□□□ 1.78
VPS52-214ENST00000463486 ZNF326Q5BKZ1 582 aaKnown RBP26.14■■□□□ 1.78
VPS52-214ENST00000463486 ADAMTS13Q76LX8 1427 aa26.14■■□□□ 1.77
VPS52-214ENST00000463486 PPP1R15AO75807 674 aaPredicted RBP26.13■■□□□ 1.77
VPS52-214ENST00000463486 CPS1P31327 1500 aa26.11■■□□□ 1.77
VPS52-214ENST00000463486 SENP3Q9H4L4 574 aaPredicted RBP26.11■■□□□ 1.77
VPS52-214ENST00000463486 TBX22Q9Y458 520 aa26.11■■□□□ 1.77
VPS52-214ENST00000463486 RPGRIP1LQ68CZ1 1315 aa26.1■■□□□ 1.77
VPS52-214ENST00000463486 IQSEC2Q5JU85 1478 aa26.09■■□□□ 1.77
VPS52-214ENST00000463486 NRXN3Q9Y4C0 1643 aa26.08■■□□□ 1.77
VPS52-214ENST00000463486 FBXO41Q8TF61 875 aa26.07■■□□□ 1.76
VPS52-214ENST00000463486 KCNA6P17658 529 aa26.06■■□□□ 1.76
VPS52-214ENST00000463486 ILDR1Q86SU0 546 aaPredicted RBP26.06■■□□□ 1.76
VPS52-214ENST00000463486 BCANQ96GW7 911 aa26.06■■□□□ 1.76
VPS52-214ENST00000463486 SETBP1Q9Y6X0 1596 aa26.06■■□□□ 1.76
VPS52-214ENST00000463486 LRRC7Q96NW7 1537 aa26.05■■□□□ 1.76
VPS52-214ENST00000463486 PPLO60437 1756 aa26.03■■□□□ 1.76
VPS52-214ENST00000463486 RGL3Q3MIN7 710 aa26.03■■□□□ 1.76
VPS52-214ENST00000463486 VGFO15240 615 aaPredicted RBP26.02■■□□□ 1.76
VPS52-214ENST00000463486 DIP2AQ14689 1571 aa26.02■■□□□ 1.76
VPS52-214ENST00000463486 NWD1Q149M9 1564 aa26.01■■□□□ 1.75
VPS52-214ENST00000463486 PIK3R4Q99570 1358 aa25.99■■□□□ 1.75
VPS52-214ENST00000463486 CHD2O14647 1828 aaKnown RBP25.99■■□□□ 1.75
VPS52-214ENST00000463486 ADGRF5Q8IZF2 1346 aa25.98■■□□□ 1.75
VPS52-214ENST00000463486 IFT172Q9UG01 1749 aa25.98■■□□□ 1.75
VPS52-214ENST00000463486 PTPRUQ92729 1446 aa25.97■■□□□ 1.75
VPS52-214ENST00000463486 METP08581 1390 aa25.96■■□□□ 1.75
VPS52-214ENST00000463486 XIRP1Q702N8 1843 aaKnown RBP25.94■■□□□ 1.74
VPS52-214ENST00000463486 NKTRP30414 1462 aaKnown RBP25.93■■□□□ 1.74
VPS52-214ENST00000463486 SETD1AO15047 1707 aaKnown RBP25.93■■□□□ 1.74
VPS52-214ENST00000463486 DHX57Q6P158 1386 aaKnown RBP25.93■■□□□ 1.74
VPS52-214ENST00000463486 ALKQ9UM73 1620 aa25.92■■□□□ 1.74
VPS52-214ENST00000463486 TMEM94Q12767 1356 aa25.91■■□□□ 1.74
VPS52-214ENST00000463486 NRXN1Q9ULB1 1477 aa25.91■■□□□ 1.74
VPS52-214ENST00000463486 AMOTL2Q9Y2J4 779 aa25.9■■□□□ 1.74
VPS52-214ENST00000463486 PROSER2Q86WR7 435 aaPredicted RBP25.89■■□□□ 1.74
VPS52-214ENST00000463486 RBM33Q96EV2 1170 aaKnown RBP25.89■■□□□ 1.74
VPS52-214ENST00000463486 PIK3C2GO75747 1445 aa25.88■■□□□ 1.73
VPS52-214ENST00000463486 MYOM2P54296 1465 aa25.87■■□□□ 1.73
VPS52-214ENST00000463486 XRN1Q8IZH2 1706 aaKnown RBP25.87■■□□□ 1.73
VPS52-214ENST00000463486 UBAP1LF5GYI3 381 aa25.86■■□□□ 1.73
VPS52-214ENST00000463486 PRAG1Q86YV5 1406 aa25.81■■□□□ 1.72
VPS52-214ENST00000463486 NCOA3Q9Y6Q9 1424 aa25.81■■□□□ 1.72
VPS52-214ENST00000463486 C14orf93Q9H972 538 aaKnown RBP25.81■■□□□ 1.72
VPS52-214ENST00000463486 ASXL1Q8IXJ9 1541 aa25.8■■□□□ 1.72
VPS52-214ENST00000463486 DCAF11Q8TEB1 546 aa25.8■■□□□ 1.72
VPS52-214ENST00000463486 SIN3AQ96ST3 1273 aa25.8■■□□□ 1.72
VPS52-214ENST00000463486 TOM1O60784 492 aa25.79■■□□□ 1.72
VPS52-214ENST00000463486 STAC3Q96MF2 364 aa25.78■■□□□ 1.72
VPS52-214ENST00000463486 PCGF6Q9BYE7 350 aa25.78■■□□□ 1.72
VPS52-214ENST00000463486 CFAP70Q5T0N1 1121 aa25.77■■□□□ 1.72
VPS52-214ENST00000463486 KDM2AQ9Y2K7 1162 aa25.76■■□□□ 1.71
VPS52-214ENST00000463486 ROBO2Q9HCK4 1378 aa25.76■■□□□ 1.71
VPS52-214ENST00000463486 TMEM132EQ6IEE7 984 aa25.75■■□□□ 1.71
VPS52-214ENST00000463486 PTCH1Q13635 1447 aa25.74■■□□□ 1.71
VPS52-214ENST00000463486 LRPPRCP42704 1394 aaKnown RBP25.72■■□□□ 1.71
VPS52-214ENST00000463486 TECPR2O15040 1411 aa25.71■■□□□ 1.71
VPS52-214ENST00000463486 MSH6P52701 1360 aa25.71■■□□□ 1.71
VPS52-214ENST00000463486 ABCC11Q96J66 1382 aa25.71■■□□□ 1.71
VPS52-214ENST00000463486 C19orf44Q9H6X5 657 aa25.71■■□□□ 1.71
VPS52-214ENST00000463486 PIP4K2BP78356 416 aa25.7■■□□□ 1.7
VPS52-214ENST00000463486 L3MBTL2Q969R5 705 aa25.69■■□□□ 1.7
VPS52-214ENST00000463486 ADGRB1O14514 1584 aa25.69■■□□□ 1.7
VPS52-214ENST00000463486 LAMC1P11047 1609 aa25.68■■□□□ 1.7
VPS52-214ENST00000463486 YTHDC2Q9H6S0 1430 aaKnown RBP25.68■■□□□ 1.7
VPS52-214ENST00000463486 NEUROD1Q13562 356 aa25.67■■□□□ 1.7
VPS52-214ENST00000463486 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.67■■□□□ 1.7
VPS52-214ENST00000463486 STK26Q9P289 416 aa25.66■■□□□ 1.7
VPS52-214ENST00000463486 ADGRL3Q9HAR2 1447 aa25.65■■□□□ 1.7
VPS52-214ENST00000463486 FAM135BQ49AJ0 1406 aa25.64■■□□□ 1.7
VPS52-214ENST00000463486 C14orf37Q86TY3 774 aa25.64■■□□□ 1.7
VPS52-214ENST00000463486 SLAIN2Q9P270 581 aa25.64■■□□□ 1.7
VPS52-214ENST00000463486 SIRT1Q96EB6 747 aa25.63■■□□□ 1.69
VPS52-214ENST00000463486 KNDC1Q76NI1 1749 aa25.63■■□□□ 1.69
VPS52-214ENST00000463486 DCCP43146 1447 aa25.63■■□□□ 1.69
VPS52-214ENST00000463486 WAPLQ7Z5K2 1190 aa25.62■■□□□ 1.69
VPS52-214ENST00000463486 NALCNQ8IZF0 1738 aa25.62■■□□□ 1.69
VPS52-214ENST00000463486 SCAF1Q9H7N4 1312 aaKnown RBP25.62■■□□□ 1.69
VPS52-214ENST00000463486 PLEKHH1Q9ULM0 1364 aa25.61■■□□□ 1.69
VPS52-214ENST00000463486 CADPS2Q86UW7 1296 aa25.61■■□□□ 1.69
VPS52-214ENST00000463486 HSPA1LP34931 641 aa25.6■■□□□ 1.69
VPS52-214ENST00000463486 ATF3P18847 181 aa25.58■■□□□ 1.69
VPS52-214ENST00000463486 MST1RQ04912 1400 aa25.56■■□□□ 1.68
VPS52-214ENST00000463486 NBPF1Q3BBV0 1214 aa25.56■■□□□ 1.68
VPS52-214ENST00000463486 DLC1Q96QB1 1528 aa25.56■■□□□ 1.68
VPS52-214ENST00000463486 KIAA1210Q9ULL0 1709 aa25.55■■□□□ 1.68
VPS52-214ENST00000463486 ROBO1Q9Y6N7 1651 aa25.55■■□□□ 1.68
VPS52-214ENST00000463486 TRAK1Q9UPV9 953 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms