RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 KCTD17Q8N5Z5 321 aa11.82□□□□□ -0.52
SHQ1-203ENST00000463369 ZNF428Q96B54 188 aa11.82□□□□□ -0.52
SHQ1-203ENST00000463369 DEPDC5O75140 1603 aa11.82□□□□□ -0.52
SHQ1-203ENST00000463369 DHX29Q7Z478 1369 aaKnown RBP11.82□□□□□ -0.52
SHQ1-203ENST00000463369 A2MP01023 1474 aa11.81□□□□□ -0.52
SHQ1-203ENST00000463369 RAD21O60216 631 aa11.8□□□□□ -0.52
SHQ1-203ENST00000463369 YEATS2Q9ULM3 1422 aa11.8□□□□□ -0.52
SHQ1-203ENST00000463369 REREQ9P2R6 1566 aa11.8□□□□□ -0.52
SHQ1-203ENST00000463369 KDM5DQ9BY66 1539 aa11.8□□□□□ -0.52
SHQ1-203ENST00000463369 RNF17Q9BXT8 1623 aaKnown RBP11.79□□□□□ -0.52
SHQ1-203ENST00000463369 ARHGEF40Q8TER5 1519 aa11.79□□□□□ -0.52
SHQ1-203ENST00000463369 IQGAP3Q86VI3 1631 aa11.79□□□□□ -0.52
SHQ1-203ENST00000463369 ATP10AO60312 1499 aa11.79□□□□□ -0.52
SHQ1-203ENST00000463369 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
SHQ1-203ENST00000463369 MYCNP04198 464 aaPredicted RBP11.79□□□□□ -0.52
SHQ1-203ENST00000463369 HNRNPUQ00839 825 aaKnown RBP eCLIP11.77□□□□□ -0.52
SHQ1-203ENST00000463369 RGS22Q8NE09 1264 aa11.77□□□□□ -0.52
SHQ1-203ENST00000463369 SIGLEC1Q9BZZ2 1709 aa11.77□□□□□ -0.52
SHQ1-203ENST00000463369 SIN3AQ96ST3 1273 aa11.77□□□□□ -0.53
SHQ1-203ENST00000463369 PZPP20742 1482 aa11.76□□□□□ -0.53
SHQ1-203ENST00000463369 MROH1Q8NDA8 1641 aa11.76□□□□□ -0.53
SHQ1-203ENST00000463369 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
SHQ1-203ENST00000463369 LMOD2Q6P5Q4 547 aa11.76□□□□□ -0.53
SHQ1-203ENST00000463369 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
SHQ1-203ENST00000463369 PRDM15P57071 1507 aaPredicted RBP11.75□□□□□ -0.53
SHQ1-203ENST00000463369 CEP152O94986 1710 aa11.75□□□□□ -0.53
SHQ1-203ENST00000463369 VWDEQ8N2E2 1590 aa11.75□□□□□ -0.53
SHQ1-203ENST00000463369 FAM135AQ9P2D6 1515 aa11.75□□□□□ -0.53
SHQ1-203ENST00000463369 NUP155O75694 1391 aa11.75□□□□□ -0.53
SHQ1-203ENST00000463369 KIF3BO15066 747 aa11.75□□□□□ -0.53
SHQ1-203ENST00000463369 AGLP35573 1532 aa11.74□□□□□ -0.53
SHQ1-203ENST00000463369 MPHOSPH9Q99550 1183 aa11.74□□□□□ -0.53
SHQ1-203ENST00000463369 MTMR7Q9Y216 660 aa11.74□□□□□ -0.53
SHQ1-203ENST00000463369 CFAP65Q6ZU64 1925 aaKnown RBP11.74□□□□□ -0.53
SHQ1-203ENST00000463369 TET3O43151 1660 aa11.73□□□□□ -0.53
SHQ1-203ENST00000463369 MAPK8IP2Q13387 824 aaPredicted RBP11.73□□□□□ -0.53
SHQ1-203ENST00000463369 RTL5Q5HYW3 569 aaPredicted RBP11.73□□□□□ -0.53
SHQ1-203ENST00000463369 IL27Q8NEV9 243 aa11.73□□□□□ -0.53
SHQ1-203ENST00000463369 CCDC136Q96JN2 1154 aa11.72□□□□□ -0.53
SHQ1-203ENST00000463369 B4GALNT3Q6L9W6 998 aa11.72□□□□□ -0.53
SHQ1-203ENST00000463369 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.72□□□□□ -0.532e-6■■■■□ 20.7
SHQ1-203ENST00000463369 E9PCH4 1651 aa11.72□□□□□ -0.53
SHQ1-203ENST00000463369 ZC3H13Q5T200 1668 aaKnown RBP11.72□□□□□ -0.53
SHQ1-203ENST00000463369 APBB1O00213 710 aa11.71□□□□□ -0.53
SHQ1-203ENST00000463369 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.71□□□□□ -0.53
SHQ1-203ENST00000463369 PDE4CQ08493 712 aa11.71□□□□□ -0.54
SHQ1-203ENST00000463369 IPO9Q96P70 1041 aaKnown RBP11.71□□□□□ -0.54
SHQ1-203ENST00000463369 KANK1Q14678 1352 aa11.7□□□□□ -0.54
SHQ1-203ENST00000463369 RBM25P49756 843 aaKnown RBP11.7□□□□□ -0.54
SHQ1-203ENST00000463369 FOXD4L5Q5VV16 416 aaPredicted RBP11.69□□□□□ -0.54
SHQ1-203ENST00000463369 FOXD4L4Q8WXT5 416 aaPredicted RBP11.69□□□□□ -0.54
SHQ1-203ENST00000463369 LMTK2Q8IWU2 1503 aa11.69□□□□□ -0.54
SHQ1-203ENST00000463369 ATF5Q9Y2D1 282 aaPredicted RBP11.69□□□□□ -0.54
SHQ1-203ENST00000463369 CAMSAP1Q5T5Y3 1602 aa11.68□□□□□ -0.54
SHQ1-203ENST00000463369 GGT6Q6P531 493 aa11.68□□□□□ -0.54
SHQ1-203ENST00000463369 POLR3GLQ9BT43 218 aa11.68□□□□□ -0.54
SHQ1-203ENST00000463369 SPHKAPQ2M3C7 1700 aa11.68□□□□□ -0.54
SHQ1-203ENST00000463369 ANP32AP39687 249 aaKnown RBP11.67□□□□□ -0.54
SHQ1-203ENST00000463369 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
SHQ1-203ENST00000463369 ABCC3O15438 1527 aa11.67□□□□□ -0.54
SHQ1-203ENST00000463369 WASHC2AQ641Q2 1341 aa11.67□□□□□ -0.54
SHQ1-203ENST00000463369 CLTCQ00610 1675 aaKnown RBP11.67□□□□□ -0.54
SHQ1-203ENST00000463369 EFCAB6Q5THR3 1501 aa11.66□□□□□ -0.54
SHQ1-203ENST00000463369 ANKRD30BQ9BXX2 1392 aa11.66□□□□□ -0.54
SHQ1-203ENST00000463369 SLC24A3Q9HC58 644 aa11.64□□□□□ -0.55
SHQ1-203ENST00000463369 WASHC2CQ9Y4E1 1318 aa11.64□□□□□ -0.55
SHQ1-203ENST00000463369 FER1L4A9Z1Z3 1794 aa11.63□□□□□ -0.55
SHQ1-203ENST00000463369 MROH2AA6NES4 1674 aa11.63□□□□□ -0.55
SHQ1-203ENST00000463369 RPRD2Q5VT52 1461 aaKnown RBP11.63□□□□□ -0.55
SHQ1-203ENST00000463369 C11orf95C9JLR9 678 aaPredicted RBP11.62□□□□□ -0.55
SHQ1-203ENST00000463369 TAF7LQ5H9L4 462 aa11.62□□□□□ -0.55
SHQ1-203ENST00000463369 ARID4BQ4LE39 1312 aaPredicted RBP11.62□□□□□ -0.55
SHQ1-203ENST00000463369 PREX1Q8TCU6 1659 aa11.61□□□□□ -0.55
SHQ1-203ENST00000463369 KIF1BO60333 1816 aa11.61□□□□□ -0.55
SHQ1-203ENST00000463369 ARHGAP31Q2M1Z3 1444 aa11.61□□□□□ -0.55
SHQ1-203ENST00000463369 POTEDQ86YR6 584 aa11.61□□□□□ -0.55
SHQ1-203ENST00000463369 PROM2Q8N271 834 aa11.61□□□□□ -0.55
SHQ1-203ENST00000463369 PLA2R1Q13018 1463 aa11.61□□□□□ -0.55
SHQ1-203ENST00000463369 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
SHQ1-203ENST00000463369 USP35Q9P2H5 1018 aa11.6□□□□□ -0.55
SHQ1-203ENST00000463369 PTPRTO14522 1441 aa11.6□□□□□ -0.55
SHQ1-203ENST00000463369 TRPM2O94759 1503 aa11.6□□□□□ -0.55
SHQ1-203ENST00000463369 MLECQ14165 292 aa11.59□□□□□ -0.55
SHQ1-203ENST00000463369 NPATQ14207 1427 aa11.59□□□□□ -0.55
SHQ1-203ENST00000463369 ZBED9Q6R2W3 1325 aa11.59□□□□□ -0.55
SHQ1-203ENST00000463369 TONSLQ96HA7 1378 aa11.58□□□□□ -0.56
SHQ1-203ENST00000463369 DMRT2Q9Y5R5 561 aa11.58□□□□□ -0.56
SHQ1-203ENST00000463369 ADAMTSL3P82987 1691 aa11.58□□□□□ -0.56
SHQ1-203ENST00000463369 CLTCL1P53675 1640 aa11.58□□□□□ -0.56
SHQ1-203ENST00000463369 C3P01024 1663 aa11.57□□□□□ -0.56
SHQ1-203ENST00000463369 CNTLNQ9NXG0 1405 aa11.57□□□□□ -0.56
SHQ1-203ENST00000463369 AEBP1Q8IUX7 1158 aa11.56□□□□□ -0.56
SHQ1-203ENST00000463369 CCDC144AA2RUR9 1427 aa11.56□□□□□ -0.56
SHQ1-203ENST00000463369 PIK3C2BO00750 1634 aa11.56□□□□□ -0.56
SHQ1-203ENST00000463369 CCDC184Q52MB2 194 aa11.56□□□□□ -0.56
SHQ1-203ENST00000463369 ESF1Q9H501 851 aaKnown RBP11.56□□□□□ -0.56
SHQ1-203ENST00000463369 NOS1P29475 1434 aa11.56□□□□□ -0.56
SHQ1-203ENST00000463369 MYO5BQ9ULV0 1848 aa11.56□□□□□ -0.56
SHQ1-203ENST00000463369 SYNMO15061 1565 aa11.56□□□□□ -0.56
SHQ1-203ENST00000463369 MADDQ8WXG6 1647 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms