RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
TNRC6A-204ENST00000462400 KIF1BO60333 1816 aa16.37■□□□□ 0.21
TNRC6A-204ENST00000462400 MADDQ8WXG6 1647 aa16.36■□□□□ 0.21
TNRC6A-204ENST00000462400 TRHP20396 242 aaPredicted RBP16.35■□□□□ 0.21
TNRC6A-204ENST00000462400 NUTM2DQ5VT03 806 aaPredicted RBP16.35■□□□□ 0.21
TNRC6A-204ENST00000462400 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
TNRC6A-204ENST00000462400 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
TNRC6A-204ENST00000462400 POLR1AO95602 1720 aaPredicted RBP16.34■□□□□ 0.21
TNRC6A-204ENST00000462400 FBXO31Q5XUX0 539 aaPredicted RBP16.33■□□□□ 0.21
TNRC6A-204ENST00000462400 DEKP35659 375 aaKnown RBP16.33■□□□□ 0.2
TNRC6A-204ENST00000462400 SYNMO15061 1565 aa16.32■□□□□ 0.2
TNRC6A-204ENST00000462400 GPRASP1Q5JY77 1395 aa16.31■□□□□ 0.2
TNRC6A-204ENST00000462400 CFAP70Q5T0N1 1121 aa16.31■□□□□ 0.2
TNRC6A-204ENST00000462400 NOS1P29475 1434 aa16.3■□□□□ 0.2
TNRC6A-204ENST00000462400 ADGRB3O60242 1522 aa16.29■□□□□ 0.2
TNRC6A-204ENST00000462400 ZC3H13Q5T200 1668 aaKnown RBP16.29■□□□□ 0.2
TNRC6A-204ENST00000462400 ARHGEF40Q8TER5 1519 aa16.29■□□□□ 0.2
TNRC6A-204ENST00000462400 IDI1Q13907 227 aa16.29■□□□□ 0.2
TNRC6A-204ENST00000462400 ARID4BQ4LE39 1312 aaPredicted RBP16.28■□□□□ 0.2
TNRC6A-204ENST00000462400 CLTCQ00610 1675 aaKnown RBP16.27■□□□□ 0.2
TNRC6A-204ENST00000462400 IFT172Q9UG01 1749 aa16.27■□□□□ 0.2
TNRC6A-204ENST00000462400 PPP4R2Q9NY27 417 aa16.26■□□□□ 0.19
TNRC6A-204ENST00000462400 DISP3Q9P2K9 1392 aa16.26■□□□□ 0.19
TNRC6A-204ENST00000462400 PREX1Q8TCU6 1659 aa16.26■□□□□ 0.19
TNRC6A-204ENST00000462400 TESK2Q96S53 571 aa16.26■□□□□ 0.19
TNRC6A-204ENST00000462400 ARHGAP31Q2M1Z3 1444 aa16.25■□□□□ 0.19
TNRC6A-204ENST00000462400 LAMC1P11047 1609 aa16.25■□□□□ 0.19
TNRC6A-204ENST00000462400 CCDC184Q52MB2 194 aa16.25■□□□□ 0.19
TNRC6A-204ENST00000462400 REREQ9P2R6 1566 aa16.25■□□□□ 0.19
TNRC6A-204ENST00000462400 AGLP35573 1532 aa16.24■□□□□ 0.19
TNRC6A-204ENST00000462400 MYO5BQ9ULV0 1848 aa16.24■□□□□ 0.19
TNRC6A-204ENST00000462400 PIK3C2BO00750 1634 aa16.24■□□□□ 0.19
TNRC6A-204ENST00000462400 MYOM2P54296 1465 aa16.23■□□□□ 0.19
TNRC6A-204ENST00000462400 NEURL4Q96JN8 1562 aa16.23■□□□□ 0.19
TNRC6A-204ENST00000462400 PPLO60437 1756 aa16.23■□□□□ 0.19
TNRC6A-204ENST00000462400 ERICH6BQ5W0A0 696 aa16.23■□□□□ 0.19
TNRC6A-204ENST00000462400 PRKRIP1Q9H875 184 aaPredicted RBP16.22■□□□□ 0.19
TNRC6A-204ENST00000462400 IQGAP1P46940 1657 aa16.22■□□□□ 0.19
TNRC6A-204ENST00000462400 TMEM132EQ6IEE7 984 aa16.22■□□□□ 0.19
TNRC6A-204ENST00000462400 NBR1Q14596 966 aa16.21■□□□□ 0.18
TNRC6A-204ENST00000462400 B4GALNT3Q6L9W6 998 aa16.21■□□□□ 0.18
TNRC6A-204ENST00000462400 STAC3Q96MF2 364 aa16.2■□□□□ 0.18
TNRC6A-204ENST00000462400 ERVK-7P63135 1459 aa16.2■□□□□ 0.18
TNRC6A-204ENST00000462400 SCAF11Q99590 1463 aaKnown RBP16.19■□□□□ 0.18
TNRC6A-204ENST00000462400 ESF1Q9H501 851 aaKnown RBP16.19■□□□□ 0.18
TNRC6A-204ENST00000462400 SLC52A1Q9NWF4 448 aa16.18■□□□□ 0.18
TNRC6A-204ENST00000462400 NRXN1Q9ULB1 1477 aa16.18■□□□□ 0.18
TNRC6A-204ENST00000462400 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
TNRC6A-204ENST00000462400 NOP58Q9Y2X3 529 aaKnown RBP16.18■□□□□ 0.18
TNRC6A-204ENST00000462400 NEXMIFQ5QGS0 1516 aa16.17■□□□□ 0.18
TNRC6A-204ENST00000462400 TMF1P82094 1093 aa16.17■□□□□ 0.18
TNRC6A-204ENST00000462400 TRAK1Q9UPV9 953 aa16.17■□□□□ 0.18
TNRC6A-204ENST00000462400 KIAA1210Q9ULL0 1709 aa16.17■□□□□ 0.18
TNRC6A-204ENST00000462400 PIK3C2GO75747 1445 aa16.17■□□□□ 0.18
TNRC6A-204ENST00000462400 TMEM131LA2VDJ0 1609 aa16.16■□□□□ 0.18
TNRC6A-204ENST00000462400 ZMYM3Q14202 1370 aa16.15■□□□□ 0.18
TNRC6A-204ENST00000462400 C14orf93Q9H972 538 aaKnown RBP16.15■□□□□ 0.18
TNRC6A-204ENST00000462400 RPGRIP1LQ68CZ1 1315 aa16.14■□□□□ 0.17
TNRC6A-204ENST00000462400 PAK3O75914 559 aaPredicted RBP16.14■□□□□ 0.17
TNRC6A-204ENST00000462400 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
TNRC6A-204ENST00000462400 DNAJC5Q9H3Z4 198 aa16.13■□□□□ 0.17
TNRC6A-204ENST00000462400 VGFO15240 615 aaPredicted RBP16.13■□□□□ 0.17
TNRC6A-204ENST00000462400 CEBPAP49715 358 aaPredicted RBP16.13■□□□□ 0.17
TNRC6A-204ENST00000462400 MRS2Q9HD23 443 aa16.13■□□□□ 0.17
TNRC6A-204ENST00000462400 PANK3Q9H999 370 aa16.12■□□□□ 0.17
TNRC6A-204ENST00000462400 FAM9BQ8IZU0 186 aa16.11■□□□□ 0.17
TNRC6A-204ENST00000462400 EIF3AQ14152 1382 aaKnown RBP16.11■□□□□ 0.17
TNRC6A-204ENST00000462400 STK26Q9P289 416 aa16.11■□□□□ 0.17
TNRC6A-204ENST00000462400 SPATA31D1Q6ZQQ2 1576 aa16.11■□□□□ 0.17
TNRC6A-204ENST00000462400 ADGRB1O14514 1584 aa16.1■□□□□ 0.17
TNRC6A-204ENST00000462400 SAFB2Q14151 953 aaKnown RBP eCLIP16.1■□□□□ 0.17
TNRC6A-204ENST00000462400 CC2D1BQ5T0F9 858 aaKnown RBP16.08■□□□□ 0.17
TNRC6A-204ENST00000462400 SETBP1Q9Y6X0 1596 aa16.07■□□□□ 0.16
TNRC6A-204ENST00000462400 PER1O15534 1290 aaPredicted RBP16.07■□□□□ 0.16
TNRC6A-204ENST00000462400 A2ML1A8K2U0 1454 aa16.07■□□□□ 0.16
TNRC6A-204ENST00000462400 CENPJQ9HC77 1338 aaPredicted RBP16.07■□□□□ 0.16
TNRC6A-204ENST00000462400 SENP3-EIF4A1A0A087X0R7 540 aa16.06■□□□□ 0.16
TNRC6A-204ENST00000462400 ANO8Q9HCE9 1232 aaPredicted RBP16.06■□□□□ 0.16
TNRC6A-204ENST00000462400 ASXL1Q8IXJ9 1541 aa16.05■□□□□ 0.16
TNRC6A-204ENST00000462400 ZBED9Q6R2W3 1325 aa16.04■□□□□ 0.16
TNRC6A-204ENST00000462400 TNRQ92752 1358 aa16.04■□□□□ 0.16
TNRC6A-204ENST00000462400 RIMS2Q9UQ26 1411 aa16.03■□□□□ 0.16
TNRC6A-204ENST00000462400 QRICH2Q9H0J4 1663 aa16.03■□□□□ 0.16
TNRC6A-204ENST00000462400 RTL5Q5HYW3 569 aaPredicted RBP16.02■□□□□ 0.16
TNRC6A-204ENST00000462400 KDM5AP29375 1690 aaKnown RBP16.02■□□□□ 0.15
TNRC6A-204ENST00000462400 MYOM1P52179 1685 aa16.02■□□□□ 0.15
TNRC6A-204ENST00000462400 ZFYVE9O95405 1425 aa16.02■□□□□ 0.15
TNRC6A-204ENST00000462400 MYO3AQ8NEV4 1616 aa16.01■□□□□ 0.15
TNRC6A-204ENST00000462400 ANP32AP39687 249 aaKnown RBP16.01■□□□□ 0.15
TNRC6A-204ENST00000462400 CDCA8Q53HL2 280 aa16.01■□□□□ 0.15
TNRC6A-204ENST00000462400 ARXQ96QS3 562 aa16.01■□□□□ 0.15
TNRC6A-204ENST00000462400 ARHGEF28Q8N1W1 1705 aaKnown RBP16■□□□□ 0.15
TNRC6A-204ENST00000462400 KTN1Q86UP2 1357 aaKnown RBP16■□□□□ 0.15
TNRC6A-204ENST00000462400 IPO9Q96P70 1041 aaKnown RBP16■□□□□ 0.15
TNRC6A-204ENST00000462400 ALKQ9UM73 1620 aa15.99■□□□□ 0.15
TNRC6A-204ENST00000462400 TMC1Q8TDI8 760 aa15.99■□□□□ 0.15
TNRC6A-204ENST00000462400 FER1L4A9Z1Z3 1794 aa15.99■□□□□ 0.15
TNRC6A-204ENST00000462400 C3P01024 1663 aa15.98■□□□□ 0.15
TNRC6A-204ENST00000462400 MYBBP1AQ9BQG0 1328 aaKnown RBP15.98■□□□□ 0.15
TNRC6A-204ENST00000462400 ZBTB47Q9UFB7 747 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms