RNA–Protein interactions for RNA: ENST00000462257.1

SH3D19-205, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-205ENST00000462257 CHRM1P11229 460 aaPredicted RBP11.58□□□□□ -0.56
SH3D19-205ENST00000462257 SUPT6HQ7KZ85 1726 aaKnown RBP11.57□□□□□ -0.56
SH3D19-205ENST00000462257 PLA2R1Q13018 1463 aa11.57□□□□□ -0.56
SH3D19-205ENST00000462257 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
SH3D19-205ENST00000462257 PCDHB8Q9UN66 801 aa11.57□□□□□ -0.56
SH3D19-205ENST00000462257 LRRIQ1Q96JM4 1722 aa11.56□□□□□ -0.56
SH3D19-205ENST00000462257 SPAG9O60271 1321 aaKnown RBP11.56□□□□□ -0.56
SH3D19-205ENST00000462257 NCKAP5LQ9HCH0 1330 aa11.56□□□□□ -0.56
SH3D19-205ENST00000462257 ZNF142P52746 1687 aaPredicted RBP11.55□□□□□ -0.56
SH3D19-205ENST00000462257 ZNF335Q9H4Z2 1342 aaPredicted RBP11.55□□□□□ -0.56
SH3D19-205ENST00000462257 CDC42BPAQ5VT25 1732 aa11.55□□□□□ -0.56
SH3D19-205ENST00000462257 SAMD9LQ8IVG5 1584 aa11.54□□□□□ -0.56
SH3D19-205ENST00000462257 TOM1O60784 492 aa11.53□□□□□ -0.56
SH3D19-205ENST00000462257 EMP3P54852 163 aa11.53□□□□□ -0.56
SH3D19-205ENST00000462257 CLTCQ00610 1675 aaKnown RBP11.52□□□□□ -0.56
SH3D19-205ENST00000462257 CASKIN1Q8WXD9 1431 aa11.52□□□□□ -0.56
SH3D19-205ENST00000462257 TCOF1Q13428 1488 aaKnown RBP11.52□□□□□ -0.56
SH3D19-205ENST00000462257 PLEKHH2Q8IVE3 1493 aa11.52□□□□□ -0.56
SH3D19-205ENST00000462257 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.57
SH3D19-205ENST00000462257 MYO3AQ8NEV4 1616 aa11.52□□□□□ -0.57
SH3D19-205ENST00000462257 CEP170BQ9Y4F5 1589 aaPredicted RBP11.51□□□□□ -0.57
SH3D19-205ENST00000462257 C3orf67Q6ZVT6 689 aa11.51□□□□□ -0.57
SH3D19-205ENST00000462257 ZNF467Q7Z7K2 595 aaPredicted RBP11.51□□□□□ -0.57
SH3D19-205ENST00000462257 PTPRKQ15262 1439 aa11.51□□□□□ -0.57
SH3D19-205ENST00000462257 KIAA1107Q9UPP5 1409 aa11.51□□□□□ -0.57
SH3D19-205ENST00000462257 HNRNPMP52272 730 aaKnown RBP eCLIP11.5□□□□□ -0.57
SH3D19-205ENST00000462257 GGT6Q6P531 493 aa11.5□□□□□ -0.57
SH3D19-205ENST00000462257 A2MP01023 1474 aa11.5□□□□□ -0.57
SH3D19-205ENST00000462257 ATP7AQ04656 1500 aa11.5□□□□□ -0.57
SH3D19-205ENST00000462257 CFDP1Q9UEE9 299 aaPredicted RBP11.48□□□□□ -0.57
SH3D19-205ENST00000462257 CIZ1Q9ULV3 898 aaPredicted RBP11.48□□□□□ -0.57
SH3D19-205ENST00000462257 CPS1P31327 1500 aa11.48□□□□□ -0.57
SH3D19-205ENST00000462257 SYCP2Q9BX26 1530 aa11.48□□□□□ -0.57
SH3D19-205ENST00000462257 PLXNC1O60486 1568 aa11.48□□□□□ -0.57
SH3D19-205ENST00000462257 ADGBQ8N7X0 1667 aa11.48□□□□□ -0.57
SH3D19-205ENST00000462257 INO80Q9ULG1 1556 aaPredicted RBP11.47□□□□□ -0.57
SH3D19-205ENST00000462257 GPATCH8Q9UKJ3 1502 aaKnown RBP11.47□□□□□ -0.57
SH3D19-205ENST00000462257 A2ML1A8K2U0 1454 aa11.47□□□□□ -0.57
SH3D19-205ENST00000462257 FYCO1Q9BQS8 1478 aa11.47□□□□□ -0.57
SH3D19-205ENST00000462257 GOLGA2Q08379 1002 aa11.46□□□□□ -0.57
SH3D19-205ENST00000462257 L3MBTL3Q96JM7 780 aaPredicted RBP11.46□□□□□ -0.57
SH3D19-205ENST00000462257 DNMT1P26358 1616 aaKnown RBP11.46□□□□□ -0.58
SH3D19-205ENST00000462257 HSPA1LP34931 641 aa11.45□□□□□ -0.58
SH3D19-205ENST00000462257 PIP4K2BP78356 416 aa11.45□□□□□ -0.58
SH3D19-205ENST00000462257 POLR1AO95602 1720 aaPredicted RBP11.45□□□□□ -0.58
SH3D19-205ENST00000462257 MED1Q15648 1581 aaPredicted RBP11.45□□□□□ -0.58
SH3D19-205ENST00000462257 CCNB3Q8WWL7 1395 aa11.44□□□□□ -0.58
SH3D19-205ENST00000462257 ANKLE2Q86XL3 938 aa11.44□□□□□ -0.58
SH3D19-205ENST00000462257 THEMISQ8N1K5 641 aaPredicted RBP11.44□□□□□ -0.58
SH3D19-205ENST00000462257 SHANK2Q9UPX8 1470 aa11.44□□□□□ -0.58
SH3D19-205ENST00000462257 MKRN3Q13064 507 aaKnown RBP11.43□□□□□ -0.58
SH3D19-205ENST00000462257 HS3ST6Q96QI5 342 aa11.43□□□□□ -0.58
SH3D19-205ENST00000462257 RTEL1-TNFRSF6BF6WH68 1400 aa11.43□□□□□ -0.58
SH3D19-205ENST00000462257 FAM135AQ9P2D6 1515 aa11.42□□□□□ -0.58
SH3D19-205ENST00000462257 FAM205CA6NFA0 338 aa11.42□□□□□ -0.58
SH3D19-205ENST00000462257 PSEN1P49768 467 aa11.41□□□□□ -0.58
SH3D19-205ENST00000462257 DHX29Q7Z478 1369 aaKnown RBP11.41□□□□□ -0.58
SH3D19-205ENST00000462257 TNRQ92752 1358 aa11.41□□□□□ -0.58
SH3D19-205ENST00000462257 RSPH4AQ5TD94 716 aa11.4□□□□□ -0.58
SH3D19-205ENST00000462257 MTUS2Q5JR59 1369 aa11.4□□□□□ -0.59
SH3D19-205ENST00000462257 PDCD7Q8N8D1 485 aaKnown RBP11.39□□□□□ -0.59
SH3D19-205ENST00000462257 DEPDC5O75140 1603 aa11.38□□□□□ -0.59
SH3D19-205ENST00000462257 PZPP20742 1482 aa11.38□□□□□ -0.59
SH3D19-205ENST00000462257 NLRP1Q9C000 1473 aa11.38□□□□□ -0.59
SH3D19-205ENST00000462257 WASHC2CQ9Y4E1 1318 aa11.38□□□□□ -0.59
SH3D19-205ENST00000462257 NEURL4Q96JN8 1562 aa11.38□□□□□ -0.59
SH3D19-205ENST00000462257 KIF3BO15066 747 aa11.38□□□□□ -0.59
SH3D19-205ENST00000462257 PDAP1Q13442 181 aaKnown RBP11.38□□□□□ -0.59
SH3D19-205ENST00000462257 KRTAP3-3Q9BYR6 98 aa11.38□□□□□ -0.59
SH3D19-205ENST00000462257 KRTAP3-2Q9BYR7 98 aa11.38□□□□□ -0.59
SH3D19-205ENST00000462257 MED14O60244 1454 aa11.38□□□□□ -0.59
SH3D19-205ENST00000462257 MIA2Q96PC5 1412 aa11.37□□□□□ -0.59
SH3D19-205ENST00000462257 KDM5DQ9BY66 1539 aa11.37□□□□□ -0.59
SH3D19-205ENST00000462257 FBXO31Q5XUX0 539 aaPredicted RBP11.36□□□□□ -0.59
SH3D19-205ENST00000462257 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.36□□□□□ -0.59
SH3D19-205ENST00000462257 MBD5Q9P267 1494 aa11.36□□□□□ -0.59
SH3D19-205ENST00000462257 VWDEQ8N2E2 1590 aa11.36□□□□□ -0.59
SH3D19-205ENST00000462257 UGGT1Q9NYU2 1555 aa11.36□□□□□ -0.59
SH3D19-205ENST00000462257 NPHP4O75161 1426 aaPredicted RBP11.35□□□□□ -0.59
SH3D19-205ENST00000462257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.34□□□□□ -0.591e-14■□□□□ 10.9
SH3D19-205ENST00000462257 ZNF644Q9H582 1327 aaPredicted RBP11.34□□□□□ -0.59
SH3D19-205ENST00000462257 IQGAP1P46940 1657 aa11.33□□□□□ -0.6
SH3D19-205ENST00000462257 POTEB3A0JP26 581 aa11.33□□□□□ -0.6
SH3D19-205ENST00000462257 POTEBQ6S5H4 581 aa11.33□□□□□ -0.6
SH3D19-205ENST00000462257 TSPY4P0CV99 314 aa11.32□□□□□ -0.6
SH3D19-205ENST00000462257 TSPY10P0CW01 314 aa11.32□□□□□ -0.6
SH3D19-205ENST00000462257 SYNMO15061 1565 aa11.32□□□□□ -0.6
SH3D19-205ENST00000462257 TIAM1Q13009 1591 aa11.32□□□□□ -0.6
SH3D19-205ENST00000462257 CCDC141Q6ZP82 1450 aa11.32□□□□□ -0.6
SH3D19-205ENST00000462257 RNF17Q9BXT8 1623 aaKnown RBP11.31□□□□□ -0.6
SH3D19-205ENST00000462257 EHBP1L1Q8N3D4 1523 aa11.31□□□□□ -0.6
SH3D19-205ENST00000462257 CEP162Q5TB80 1403 aa11.31□□□□□ -0.6
SH3D19-205ENST00000462257 LRRC7Q96NW7 1537 aa11.3□□□□□ -0.6
SH3D19-205ENST00000462257 G3V3G9 751 aa11.3□□□□□ -0.6
SH3D19-205ENST00000462257 ALKQ9UM73 1620 aa11.3□□□□□ -0.6
SH3D19-205ENST00000462257 ZC3H13Q5T200 1668 aaKnown RBP11.29□□□□□ -0.6
SH3D19-205ENST00000462257 STRCP1A6NGW2 1772 aa11.27□□□□□ -0.61
SH3D19-205ENST00000462257 ARHGEF5Q12774 1597 aa11.26□□□□□ -0.61
SH3D19-205ENST00000462257 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
SH3D19-205ENST00000462257 CAMSAP2Q08AD1 1489 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms