RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SLC52A1Q9NWF4 448 aa17.02■□□□□ 0.32
CBX3-205ENST00000462165 CHIC2Q9UKJ5 165 aa17.02■□□□□ 0.32
CBX3-205ENST00000462165 MYO5BQ9ULV0 1848 aa17.01■□□□□ 0.31
CBX3-205ENST00000462165 APLP2Q06481 763 aa17.01■□□□□ 0.31
CBX3-205ENST00000462165 CHD2O14647 1828 aaKnown RBP17■□□□□ 0.31
CBX3-205ENST00000462165 ADGRL2O95490 1459 aa17■□□□□ 0.31
CBX3-205ENST00000462165 POTEAQ6S8J7 498 aa17■□□□□ 0.31
CBX3-205ENST00000462165 RPRD2Q5VT52 1461 aaKnown RBP16.99■□□□□ 0.31
CBX3-205ENST00000462165 RBM33Q96EV2 1170 aaKnown RBP16.99■□□□□ 0.31
CBX3-205ENST00000462165 MSH6P52701 1360 aa16.99■□□□□ 0.31
CBX3-205ENST00000462165 PHLPP1O60346 1717 aa16.99■□□□□ 0.31
CBX3-205ENST00000462165 GCC2Q8IWJ2 1684 aa16.97■□□□□ 0.31
CBX3-205ENST00000462165 ZFYVE9O95405 1425 aa16.97■□□□□ 0.31
CBX3-205ENST00000462165 PLEKHG1Q9ULL1 1385 aa16.96■□□□□ 0.31
CBX3-205ENST00000462165 TMEM131LA2VDJ0 1609 aa16.96■□□□□ 0.3
CBX3-205ENST00000462165 BCANQ96GW7 911 aa16.94■□□□□ 0.3
CBX3-205ENST00000462165 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
CBX3-205ENST00000462165 ANKRD50Q9ULJ7 1429 aa16.94■□□□□ 0.3
CBX3-205ENST00000462165 JCADQ9P266 1359 aa16.93■□□□□ 0.3
CBX3-205ENST00000462165 RIMS2Q9UQ26 1411 aa16.93■□□□□ 0.3
CBX3-205ENST00000462165 COL16A1Q07092 1604 aaPredicted RBP16.92■□□□□ 0.3
CBX3-205ENST00000462165 HDGFP51858 240 aaKnown RBP16.92■□□□□ 0.3
CBX3-205ENST00000462165 NCOA3Q9Y6Q9 1424 aa16.92■□□□□ 0.3
CBX3-205ENST00000462165 SETD1AO15047 1707 aaKnown RBP16.92■□□□□ 0.3
CBX3-205ENST00000462165 TBX22Q9Y458 520 aa16.9■□□□□ 0.3
CBX3-205ENST00000462165 UNC13BO14795 1591 aa16.89■□□□□ 0.3
CBX3-205ENST00000462165 PPP1R15AO75807 674 aaPredicted RBP16.89■□□□□ 0.29
CBX3-205ENST00000462165 DIP2AQ14689 1571 aa16.89■□□□□ 0.29
CBX3-205ENST00000462165 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.88■□□□□ 0.29
CBX3-205ENST00000462165 E9PCH4 1651 aa16.88■□□□□ 0.29
CBX3-205ENST00000462165 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.87■□□□□ 0.29
CBX3-205ENST00000462165 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
CBX3-205ENST00000462165 AHDC1Q5TGY3 1603 aaPredicted RBP16.86■□□□□ 0.29
CBX3-205ENST00000462165 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
CBX3-205ENST00000462165 PIK3R4Q99570 1358 aa16.86■□□□□ 0.29
CBX3-205ENST00000462165 SHPRHQ149N8 1683 aa16.85■□□□□ 0.29
CBX3-205ENST00000462165 SPATA31A6Q5VVP1 1343 aa16.85■□□□□ 0.29
CBX3-205ENST00000462165 LRP6O75581 1613 aa16.85■□□□□ 0.29
CBX3-205ENST00000462165 CADPS2Q86UW7 1296 aa16.83■□□□□ 0.28
CBX3-205ENST00000462165 IQGAP3Q86VI3 1631 aa16.83■□□□□ 0.28
CBX3-205ENST00000462165 CHGAP10645 457 aaKnown RBP16.82■□□□□ 0.28
CBX3-205ENST00000462165 C14orf37Q86TY3 774 aa16.82■□□□□ 0.28
CBX3-205ENST00000462165 C19orf44Q9H6X5 657 aa16.82■□□□□ 0.28
CBX3-205ENST00000462165 TRPM2O94759 1503 aa16.81■□□□□ 0.28
CBX3-205ENST00000462165 ATF3P18847 181 aa16.8■□□□□ 0.28
CBX3-205ENST00000462165 NUTM2DQ5VT03 806 aaPredicted RBP16.8■□□□□ 0.28
CBX3-205ENST00000462165 ZNF772Q68DY9 489 aaPredicted RBP16.8■□□□□ 0.28
CBX3-205ENST00000462165 ROCK1Q13464 1354 aa16.78■□□□□ 0.28
CBX3-205ENST00000462165 MEX3CQ5U5Q3 659 aaKnown RBP16.78■□□□□ 0.28
CBX3-205ENST00000462165 PTPRUQ92729 1446 aa16.78■□□□□ 0.28
CBX3-205ENST00000462165 DCCP43146 1447 aa16.77■□□□□ 0.27
CBX3-205ENST00000462165 XRN1Q8IZH2 1706 aaKnown RBP16.76■□□□□ 0.27
CBX3-205ENST00000462165 BRINP3Q76B58 766 aa16.76■□□□□ 0.27
CBX3-205ENST00000462165 AMOTL2Q9Y2J4 779 aa16.76■□□□□ 0.27
CBX3-205ENST00000462165 NRXN3Q9Y4C0 1643 aa16.76■□□□□ 0.27
CBX3-205ENST00000462165 UPF1Q92900 1129 aaKnown RBP eCLIP16.75■□□□□ 0.27
CBX3-205ENST00000462165 NHSL1Q5SYE7 1610 aa16.74■□□□□ 0.27
CBX3-205ENST00000462165 SETBP1Q9Y6X0 1596 aa16.74■□□□□ 0.27
CBX3-205ENST00000462165 TRIM52Q96A61 297 aa16.73■□□□□ 0.27
CBX3-205ENST00000462165 ASXL1Q8IXJ9 1541 aa16.73■□□□□ 0.27
CBX3-205ENST00000462165 NUP155O75694 1391 aa16.73■□□□□ 0.27
CBX3-205ENST00000462165 SPHKAPQ2M3C7 1700 aa16.73■□□□□ 0.27
CBX3-205ENST00000462165 SETD5Q9C0A6 1442 aa16.72■□□□□ 0.27
CBX3-205ENST00000462165 CDK12Q9NYV4 1490 aaPredicted RBP16.72■□□□□ 0.27
CBX3-205ENST00000462165 RXRBP28702 533 aa16.71■□□□□ 0.27
CBX3-205ENST00000462165 MST1RQ04912 1400 aa16.7■□□□□ 0.26
CBX3-205ENST00000462165 NUTM2BA6NNL0 878 aaPredicted RBP16.68■□□□□ 0.26
CBX3-205ENST00000462165 NUTM2EB1AL46 878 aaPredicted RBP16.68■□□□□ 0.26
CBX3-205ENST00000462165 NUTM2AQ8IVF1 878 aaPredicted RBP16.68■□□□□ 0.26
CBX3-205ENST00000462165 NALCNQ8IZF0 1738 aa16.67■□□□□ 0.26
CBX3-205ENST00000462165 AFF2P51816 1311 aa16.67■□□□□ 0.26
CBX3-205ENST00000462165 METP08581 1390 aa16.66■□□□□ 0.26
CBX3-205ENST00000462165 LRRC59Q96AG4 307 aaKnown RBP16.66■□□□□ 0.26
CBX3-205ENST00000462165 ADGRL3Q9HAR2 1447 aa16.66■□□□□ 0.26
CBX3-205ENST00000462165 NEXMIFQ5QGS0 1516 aa16.65■□□□□ 0.26
CBX3-205ENST00000462165 ZNF326Q5BKZ1 582 aaKnown RBP16.64■□□□□ 0.25
CBX3-205ENST00000462165 KIF1BO60333 1816 aa16.63■□□□□ 0.25
CBX3-205ENST00000462165 LAMC1P11047 1609 aa16.63■□□□□ 0.25
CBX3-205ENST00000462165 CLTCL1P53675 1640 aa16.63■□□□□ 0.25
CBX3-205ENST00000462165 PNPLA6Q8IY17 1366 aa16.63■□□□□ 0.25
CBX3-205ENST00000462165 ITGAEP38570 1179 aa16.61■□□□□ 0.25
CBX3-205ENST00000462165 RGS12O14924 1447 aa16.61■□□□□ 0.25
CBX3-205ENST00000462165 RBM6P78332 1123 aaKnown RBP16.6■□□□□ 0.25
CBX3-205ENST00000462165 DDX17Q92841 729 aaKnown RBP16.6■□□□□ 0.25
CBX3-205ENST00000462165 C8orf37Q96NL8 207 aa16.59■□□□□ 0.25
CBX3-205ENST00000462165 QTRT2Q9H974 415 aaKnown RBP16.59■□□□□ 0.25
CBX3-205ENST00000462165 C1orf167Q5SNV9 1468 aa16.59■□□□□ 0.25
CBX3-205ENST00000462165 SRCAPQ6ZRS2 3230 aa16.58■□□□□ 0.24
CBX3-205ENST00000462165 PTCH1Q13635 1447 aa16.57■□□□□ 0.24
CBX3-205ENST00000462165 SOS2Q07890 1332 aaPredicted RBP16.55■□□□□ 0.24
CBX3-205ENST00000462165 PRAG1Q86YV5 1406 aa16.54■□□□□ 0.24
CBX3-205ENST00000462165 EP400Q96L91 3159 aa16.54■□□□□ 0.24
CBX3-205ENST00000462165 ADAMTS2O95450 1211 aa16.53■□□□□ 0.24
CBX3-205ENST00000462165 NGLY1Q96IV0 654 aa16.53■□□□□ 0.24
CBX3-205ENST00000462165 COL22A1Q8NFW1 1626 aaPredicted RBP16.52■□□□□ 0.24
CBX3-205ENST00000462165 ROBO2Q9HCK4 1378 aa16.52■□□□□ 0.24
CBX3-205ENST00000462165 VGFO15240 615 aaPredicted RBP16.51■□□□□ 0.23
CBX3-205ENST00000462165 ORAI2Q96SN7 254 aa16.51■□□□□ 0.23
CBX3-205ENST00000462165 PPLO60437 1756 aa16.5■□□□□ 0.23
CBX3-205ENST00000462165 HFM1A2PYH4 1435 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms