RNA–Protein interactions for RNA: ENST00000462129.1

RER1-206, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-206ENST00000462129 CHIC2Q9UKJ5 165 aa27.18■■□□□ 1.94
RER1-206ENST00000462129 ANKRD30AQ9BXX3 1397 aa27.18■■□□□ 1.94
RER1-206ENST00000462129 NOS1P29475 1434 aa27.16■■□□□ 1.94
RER1-206ENST00000462129 BCANQ96GW7 911 aa27.16■■□□□ 1.94
RER1-206ENST00000462129 MSH6P52701 1360 aa27.14■■□□□ 1.94
RER1-206ENST00000462129 PHLPP1O60346 1717 aa27.1■■□□□ 1.93
RER1-206ENST00000462129 SLC52A1Q9NWF4 448 aa27.09■■□□□ 1.93
RER1-206ENST00000462129 SETD1AO15047 1707 aaKnown RBP27.07■■□□□ 1.92
RER1-206ENST00000462129 SLAIN2Q9P270 581 aa27.06■■□□□ 1.92
RER1-206ENST00000462129 JCADQ9P266 1359 aa27.06■■□□□ 1.92
RER1-206ENST00000462129 PLEKHG1Q9ULL1 1385 aa27.04■■□□□ 1.92
RER1-206ENST00000462129 ZFYVE9O95405 1425 aa27.04■■□□□ 1.92
RER1-206ENST00000462129 PPP1R15AO75807 674 aaPredicted RBP27.03■■□□□ 1.92
RER1-206ENST00000462129 ADGRL2O95490 1459 aa27.03■■□□□ 1.92
RER1-206ENST00000462129 RPRD2Q5VT52 1461 aaKnown RBP27.03■■□□□ 1.92
RER1-206ENST00000462129 GCC2Q8IWJ2 1684 aa27.02■■□□□ 1.92
RER1-206ENST00000462129 RIMS2Q9UQ26 1411 aa27.02■■□□□ 1.92
RER1-206ENST00000462129 CHD2O14647 1828 aaKnown RBP27.01■■□□□ 1.91
RER1-206ENST00000462129 MYO5BQ9ULV0 1848 aa27.01■■□□□ 1.91
RER1-206ENST00000462129 ROCK1Q13464 1354 aa27■■□□□ 1.91
RER1-206ENST00000462129 COL16A1Q07092 1604 aaPredicted RBP26.99■■□□□ 1.91
RER1-206ENST00000462129 ANKRD50Q9ULJ7 1429 aa26.98■■□□□ 1.91
RER1-206ENST00000462129 TMEM131LA2VDJ0 1609 aa26.97■■□□□ 1.91
RER1-206ENST00000462129 HDGFP51858 240 aaKnown RBP26.96■■□□□ 1.91
RER1-206ENST00000462129 C14orf37Q86TY3 774 aa26.96■■□□□ 1.91
RER1-206ENST00000462129 TRIM26Q12899 539 aaPredicted RBP26.94■■□□□ 1.9
RER1-206ENST00000462129 LRP6O75581 1613 aa26.94■■□□□ 1.9
RER1-206ENST00000462129 CHGAP10645 457 aaKnown RBP26.93■■□□□ 1.9
RER1-206ENST00000462129 NCOA3Q9Y6Q9 1424 aa26.92■■□□□ 1.9
RER1-206ENST00000462129 MEX3CQ5U5Q3 659 aaKnown RBP26.92■■□□□ 1.9
RER1-206ENST00000462129 TBX22Q9Y458 520 aa26.92■■□□□ 1.9
RER1-206ENST00000462129 SPATA31A6Q5VVP1 1343 aa26.9■■□□□ 1.9
RER1-206ENST00000462129 NUTM2DQ5VT03 806 aaPredicted RBP26.89■■□□□ 1.9
RER1-206ENST00000462129 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.89■■□□□ 1.9
RER1-206ENST00000462129 AHDC1Q5TGY3 1603 aaPredicted RBP26.88■■□□□ 1.89
RER1-206ENST00000462129 ADAMTS13Q76LX8 1427 aa26.88■■□□□ 1.89
RER1-206ENST00000462129 DIP2AQ14689 1571 aa26.88■■□□□ 1.89
RER1-206ENST00000462129 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.87■■□□□ 1.89
RER1-206ENST00000462129 CADPS2Q86UW7 1296 aa26.87■■□□□ 1.89
RER1-206ENST00000462129 UNC13BO14795 1591 aa26.86■■□□□ 1.89
RER1-206ENST00000462129 ATF3P18847 181 aa26.85■■□□□ 1.89
RER1-206ENST00000462129 ZNF772Q68DY9 489 aaPredicted RBP26.85■■□□□ 1.89
RER1-206ENST00000462129 SHPRHQ149N8 1683 aa26.85■■□□□ 1.89
RER1-206ENST00000462129 TRIM52Q96A61 297 aa26.84■■□□□ 1.89
RER1-206ENST00000462129 C19orf44Q9H6X5 657 aa26.84■■□□□ 1.89
RER1-206ENST00000462129 HFM1A2PYH4 1435 aa26.83■■□□□ 1.89
RER1-206ENST00000462129 E9PCH4 1651 aa26.83■■□□□ 1.89
RER1-206ENST00000462129 PIK3R4Q99570 1358 aa26.83■■□□□ 1.88
RER1-206ENST00000462129 TRPM2O94759 1503 aa26.8■■□□□ 1.88
RER1-206ENST00000462129 NAIPQ13075 1403 aa26.8■■□□□ 1.88
RER1-206ENST00000462129 UPF1Q92900 1129 aaKnown RBP eCLIP26.79■■□□□ 1.88
RER1-206ENST00000462129 BRINP3Q76B58 766 aa26.77■■□□□ 1.88
RER1-206ENST00000462129 PTPRUQ92729 1446 aa26.76■■□□□ 1.87
RER1-206ENST00000462129 AMOTL2Q9Y2J4 779 aa26.76■■□□□ 1.87
RER1-206ENST00000462129 IQGAP3Q86VI3 1631 aa26.76■■□□□ 1.87
RER1-206ENST00000462129 NUTM2BA6NNL0 878 aaPredicted RBP26.75■■□□□ 1.87
RER1-206ENST00000462129 NUTM2EB1AL46 878 aaPredicted RBP26.75■■□□□ 1.87
RER1-206ENST00000462129 NUTM2AQ8IVF1 878 aaPredicted RBP26.75■■□□□ 1.87
RER1-206ENST00000462129 RXRBP28702 533 aa26.73■■□□□ 1.87
RER1-206ENST00000462129 SETD5Q9C0A6 1442 aa26.73■■□□□ 1.87
RER1-206ENST00000462129 ACIN1Q9UKV3 1341 aaKnown RBP26.72■■□□□ 1.87
RER1-206ENST00000462129 ASXL1Q8IXJ9 1541 aa26.72■■□□□ 1.87
RER1-206ENST00000462129 DCCP43146 1447 aa26.72■■□□□ 1.87
RER1-206ENST00000462129 XRN1Q8IZH2 1706 aaKnown RBP26.68■■□□□ 1.86
RER1-206ENST00000462129 NUP155O75694 1391 aa26.68■■□□□ 1.86
RER1-206ENST00000462129 NRXN3Q9Y4C0 1643 aa26.68■■□□□ 1.86
RER1-206ENST00000462129 CDK12Q9NYV4 1490 aaPredicted RBP26.68■■□□□ 1.86
RER1-206ENST00000462129 AFF2P51816 1311 aa26.67■■□□□ 1.86
RER1-206ENST00000462129 MST1RQ04912 1400 aa26.66■■□□□ 1.86
RER1-206ENST00000462129 NHSL1Q5SYE7 1610 aa26.65■■□□□ 1.86
RER1-206ENST00000462129 SETBP1Q9Y6X0 1596 aa26.65■■□□□ 1.86
RER1-206ENST00000462129 RAB3GAP2Q9H2M9 1393 aa26.63■■□□□ 1.85
RER1-206ENST00000462129 PCGF6Q9BYE7 350 aa26.61■■□□□ 1.85
RER1-206ENST00000462129 ZNF326Q5BKZ1 582 aaKnown RBP26.6■■□□□ 1.85
RER1-206ENST00000462129 METP08581 1390 aa26.59■■□□□ 1.85
RER1-206ENST00000462129 LRRC59Q96AG4 307 aaKnown RBP26.59■■□□□ 1.85
RER1-206ENST00000462129 C8orf37Q96NL8 207 aa26.59■■□□□ 1.85
RER1-206ENST00000462129 SPHKAPQ2M3C7 1700 aa26.59■■□□□ 1.85
RER1-206ENST00000462129 RGS12O14924 1447 aa26.58■■□□□ 1.85
RER1-206ENST00000462129 DDX17Q92841 729 aaKnown RBP26.58■■□□□ 1.85
RER1-206ENST00000462129 ADGRL3Q9HAR2 1447 aa26.57■■□□□ 1.84
RER1-206ENST00000462129 PNPLA6Q8IY17 1366 aa26.56■■□□□ 1.84
RER1-206ENST00000462129 HRCP23327 699 aa26.55■■□□□ 1.84
RER1-206ENST00000462129 NALCNQ8IZF0 1738 aa26.54■■□□□ 1.84
RER1-206ENST00000462129 QTRT2Q9H974 415 aaKnown RBP26.53■■□□□ 1.84
RER1-206ENST00000462129 RBM6P78332 1123 aaKnown RBP26.52■■□□□ 1.84
RER1-206ENST00000462129 SLC4A1APQ9BWU0 796 aaKnown RBP26.5■■□□□ 1.83
RER1-206ENST00000462129 NEXMIFQ5QGS0 1516 aa26.49■■□□□ 1.83
RER1-206ENST00000462129 ADAMTS2O95450 1211 aa26.48■■□□□ 1.83
RER1-206ENST00000462129 CLTCL1P53675 1640 aa26.47■■□□□ 1.83
RER1-206ENST00000462129 C1orf167Q5SNV9 1468 aa26.47■■□□□ 1.83
RER1-206ENST00000462129 NGLY1Q96IV0 654 aa26.46■■□□□ 1.83
RER1-206ENST00000462129 PTCH1Q13635 1447 aa26.41■■□□□ 1.82
RER1-206ENST00000462129 LAMC1P11047 1609 aa26.41■■□□□ 1.82
RER1-206ENST00000462129 MPHOSPH9Q99550 1183 aa26.41■■□□□ 1.82
RER1-206ENST00000462129 ATAD2Q6PL18 1390 aa26.39■■□□□ 1.82
RER1-206ENST00000462129 ROBO2Q9HCK4 1378 aa26.38■■□□□ 1.81
RER1-206ENST00000462129 KIF1BO60333 1816 aa26.38■■□□□ 1.81
RER1-206ENST00000462129 ORAI2Q96SN7 254 aa26.38■■□□□ 1.81
RER1-206ENST00000462129 USP21Q9UK80 565 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms