RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-215ENST00000461974 NBPF3Q9H094 633 aa8.24□□□□□ -1.09
FN1-215ENST00000461974 TIMELESSQ9UNS1 1208 aa8.24□□□□□ -1.09
FN1-215ENST00000461974 BHMG1C9JSJ3 638 aaPredicted RBP8.23□□□□□ -1.09
FN1-215ENST00000461974 PCMTD1Q96MG8 357 aaPredicted RBP8.23□□□□□ -1.09
FN1-215ENST00000461974 GJA5P36382 358 aa8.22□□□□□ -1.09
FN1-215ENST00000461974 TUSC1Q2TAM9 212 aa8.22□□□□□ -1.09
FN1-215ENST00000461974 FAM163AQ96GL9 167 aaPredicted RBP8.22□□□□□ -1.09
FN1-215ENST00000461974 AXIN2Q9Y2T1 843 aa8.22□□□□□ -1.09
FN1-215ENST00000461974 POTEB3A0JP26 581 aa8.21□□□□□ -1.1
FN1-215ENST00000461974 MYSM1Q5VVJ2 828 aa8.21□□□□□ -1.1
FN1-215ENST00000461974 POTEBQ6S5H4 581 aa8.21□□□□□ -1.1
FN1-215ENST00000461974 SMAPO00193 183 aa8.2□□□□□ -1.1
FN1-215ENST00000461974 LSM11P83369 360 aaKnown RBP eCLIP8.2□□□□□ -1.1
FN1-215ENST00000461974 RSPH4AQ5TD94 716 aa8.2□□□□□ -1.1
FN1-215ENST00000461974 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.2□□□□□ -1.1
FN1-215ENST00000461974 TBC1D2Q9BYX2 928 aa8.19□□□□□ -1.1
FN1-215ENST00000461974 DDX11L8A8MPP1 907 aa8.18□□□□□ -1.1
FN1-215ENST00000461974 SLC4A3P48751 1232 aa8.18□□□□□ -1.1
FN1-215ENST00000461974 CLK2P49760 499 aaKnown RBP8.18□□□□□ -1.1
FN1-215ENST00000461974 HDGFP51858 240 aaKnown RBP8.18□□□□□ -1.1
FN1-215ENST00000461974 USP46P62068 366 aa8.18□□□□□ -1.1
FN1-215ENST00000461974 SPIRE2Q8WWL2 714 aa8.18□□□□□ -1.1
FN1-215ENST00000461974 NECTIN2Q92692 538 aa8.18□□□□□ -1.1
FN1-215ENST00000461974 SEPT9Q9UHD8 586 aaPredicted RBP8.18□□□□□ -1.1
FN1-215ENST00000461974 HRO43593 1189 aa8.17□□□□□ -1.1
FN1-215ENST00000461974 SWT1Q5T5J6 900 aaKnown RBP8.17□□□□□ -1.1
FN1-215ENST00000461974 ADGRD1Q6QNK2 874 aa8.17□□□□□ -1.1
FN1-215ENST00000461974 SLF2Q8IX21 1173 aa8.17□□□□□ -1.1
FN1-215ENST00000461974 FLIIQ13045 1269 aa8.16□□□□□ -1.1
FN1-215ENST00000461974 SPTLC1O15269 473 aa8.15□□□□□ -1.1
FN1-215ENST00000461974 GCGRP47871 477 aa8.15□□□□□ -1.1
FN1-215ENST00000461974 C14orf37Q86TY3 774 aa8.15□□□□□ -1.1
FN1-215ENST00000461974 SLC10A3P09131 477 aa8.14□□□□□ -1.11
FN1-215ENST00000461974 PPP2R2DQ66LE6 453 aa8.14□□□□□ -1.11
FN1-215ENST00000461974 NUTM1Q86Y26 1132 aa8.14□□□□□ -1.11
FN1-215ENST00000461974 RDH13Q8NBN7 331 aa8.14□□□□□ -1.11
FN1-215ENST00000461974 ZFRQ96KR1 1074 aaKnown RBP8.14□□□□□ -1.11
FN1-215ENST00000461974 KDM4AO75164 1064 aa8.13□□□□□ -1.11
FN1-215ENST00000461974 RSBN1LQ6PCB5 846 aaPredicted RBP8.13□□□□□ -1.11
FN1-215ENST00000461974 SAMD7Q7Z3H4 446 aa8.13□□□□□ -1.11
FN1-215ENST00000461974 MRPL50Q8N5N7 158 aaKnown RBP8.13□□□□□ -1.11
FN1-215ENST00000461974 SOCS7O14512 581 aa8.12□□□□□ -1.11
FN1-215ENST00000461974 RIC3Q7Z5B4 369 aa8.12□□□□□ -1.11
FN1-215ENST00000461974 HOXA2O43364 376 aa8.11□□□□□ -1.11
FN1-215ENST00000461974 PRPF38BQ5VTL8 546 aaKnown RBP8.11□□□□□ -1.11
FN1-215ENST00000461974 LIMD1Q9UGP4 676 aa8.11□□□□□ -1.11
FN1-215ENST00000461974 MOXD2PA6NHM9 499 aa8.1□□□□□ -1.11
FN1-215ENST00000461974 PROCA1Q8NCQ7 364 aaPredicted RBP8.1□□□□□ -1.11
FN1-215ENST00000461974 PRR14Q9BWN1 585 aa8.1□□□□□ -1.11
FN1-215ENST00000461974 POLR3EQ9NVU0 708 aa8.1□□□□□ -1.11
FN1-215ENST00000461974 GRIPAP1Q4V328 841 aa8.09□□□□□ -1.11
FN1-215ENST00000461974 BANK1Q8NDB2 785 aa8.09□□□□□ -1.11
FN1-215ENST00000461974 LRCH3Q96II8 777 aa8.09□□□□□ -1.11
FN1-215ENST00000461974 LILRB3O75022 631 aa8.08□□□□□ -1.12
FN1-215ENST00000461974 KMT5BQ4FZB7 885 aa8.08□□□□□ -1.12
FN1-215ENST00000461974 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.08□□□□□ -1.12
FN1-215ENST00000461974 SOWAHBA6NEL2 793 aa8.07□□□□□ -1.12
FN1-215ENST00000461974 CFHP08603 1231 aa8.07□□□□□ -1.12
FN1-215ENST00000461974 RFC5P40937 340 aa8.07□□□□□ -1.12
FN1-215ENST00000461974 MCM6Q14566 821 aa8.07□□□□□ -1.12
FN1-215ENST00000461974 TMEM259Q4ZIN3 620 aa8.07□□□□□ -1.12
FN1-215ENST00000461974 ANKK1Q8NFD2 765 aa8.07□□□□□ -1.12
FN1-215ENST00000461974 KRTAP3-3Q9BYR6 98 aa8.07□□□□□ -1.12
FN1-215ENST00000461974 KRTAP3-2Q9BYR7 98 aa8.07□□□□□ -1.12
FN1-215ENST00000461974 SPDYE5A6NIY4 337 aa8.06□□□□□ -1.12
FN1-215ENST00000461974 ACTN4O43707 911 aaKnown RBP8.05□□□□□ -1.12
FN1-215ENST00000461974 FDX1P10109 184 aa8.05□□□□□ -1.12
FN1-215ENST00000461974 ATP6V1AP38606 617 aa8.05□□□□□ -1.12
FN1-215ENST00000461974 ZMYND15Q9H091 742 aa8.05□□□□□ -1.12
FN1-215ENST00000461974 ZBTB3Q9H5J0 574 aa8.05□□□□□ -1.12
FN1-215ENST00000461974 NDUFV2P19404 249 aa8.04□□□□□ -1.12
FN1-215ENST00000461974 FUT2Q10981 343 aa8.04□□□□□ -1.12
FN1-215ENST00000461974 STAC3Q96MF2 364 aa8.04□□□□□ -1.12
FN1-215ENST00000461974 GOLGA8CPA6NN73 597 aa8.03□□□□□ -1.12
FN1-215ENST00000461974 ANKRD13DQ6ZTN6 518 aa8.03□□□□□ -1.12
FN1-215ENST00000461974 A6NJR5 290 aa8.02□□□□□ -1.13
FN1-215ENST00000461974 RNF40O75150 1001 aa8.02□□□□□ -1.13
FN1-215ENST00000461974 HRCP23327 699 aa8.02□□□□□ -1.13
FN1-215ENST00000461974 QPCTQ16769 361 aa8.02□□□□□ -1.13
FN1-215ENST00000461974 FBXO31Q5XUX0 539 aaPredicted RBP8.02□□□□□ -1.13
FN1-215ENST00000461974 TSR3Q9UJK0 312 aaKnown RBP8.02□□□□□ -1.13
FN1-215ENST00000461974 PCDHGC3Q9UN70 934 aa8.02□□□□□ -1.13
FN1-215ENST00000461974 PCDHB15Q9Y5E8 787 aa8.02□□□□□ -1.13
FN1-215ENST00000461974 MTMR2Q13614 643 aa8.01□□□□□ -1.13
FN1-215ENST00000461974 WNT2BQ93097 391 aa8.01□□□□□ -1.13
FN1-215ENST00000461974 ATP1B4Q9UN42 357 aaPredicted RBP8.01□□□□□ -1.13
FN1-215ENST00000461974 SALL2Q9Y467 1007 aaPredicted RBP8.01□□□□□ -1.13
FN1-215ENST00000461974 MORN1Q5T089 497 aa8□□□□□ -1.13
FN1-215ENST00000461974 NYAP1Q6ZVC0 841 aa8□□□□□ -1.13
FN1-215ENST00000461974 APBB1O00213 710 aa7.99□□□□□ -1.13
FN1-215ENST00000461974 PPP4CP60510 307 aa7.99□□□□□ -1.13
FN1-215ENST00000461974 HPS5Q9UPZ3 1129 aa7.99□□□□□ -1.13
FN1-215ENST00000461974 UBTFP17480 764 aaKnown RBP7.98□□□□□ -1.13
FN1-215ENST00000461974 Q3C1V9 767 aa7.98□□□□□ -1.13
FN1-215ENST00000461974 THSD4Q6ZMP0 1018 aa7.98□□□□□ -1.13
FN1-215ENST00000461974 NUTM2BA6NNL0 878 aaPredicted RBP7.97□□□□□ -1.13
FN1-215ENST00000461974 NUTM2EB1AL46 878 aaPredicted RBP7.97□□□□□ -1.13
FN1-215ENST00000461974 BCAMP50895 628 aa7.97□□□□□ -1.13
FN1-215ENST00000461974 GUCA2AQ02747 115 aa7.97□□□□□ -1.13
FN1-215ENST00000461974 CSPP1Q1MSJ5 1256 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms