RNA–Protein interactions for RNA: ENST00000461684.5

CHRD-210, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 677 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-210ENST00000461684 NWD1Q149M9 1564 aa24.59■■□□□ 1.53
CHRD-210ENST00000461684 NKTRP30414 1462 aaKnown RBP24.59■■□□□ 1.53
CHRD-210ENST00000461684 ROBO1Q9Y6N7 1651 aa24.59■■□□□ 1.53
CHRD-210ENST00000461684 GCC2Q8IWJ2 1684 aa24.58■■□□□ 1.53
CHRD-210ENST00000461684 CHD2O14647 1828 aaKnown RBP24.56■■□□□ 1.52
CHRD-210ENST00000461684 HDGFP51858 240 aaKnown RBP24.56■■□□□ 1.52
CHRD-210ENST00000461684 RBM33Q96EV2 1170 aaKnown RBP24.54■■□□□ 1.52
CHRD-210ENST00000461684 TMEM131LA2VDJ0 1609 aa24.53■■□□□ 1.52
CHRD-210ENST00000461684 ZFYVE9O95405 1425 aa24.53■■□□□ 1.52
CHRD-210ENST00000461684 UNC13BO14795 1591 aa24.53■■□□□ 1.52
CHRD-210ENST00000461684 MSH6P52701 1360 aa24.53■■□□□ 1.52
CHRD-210ENST00000461684 PLEKHG1Q9ULL1 1385 aa24.53■■□□□ 1.52
CHRD-210ENST00000461684 PPP1R15AO75807 674 aaPredicted RBP24.52■■□□□ 1.52
CHRD-210ENST00000461684 RGS17Q9UGC6 210 aaPredicted RBP24.52■■□□□ 1.52
CHRD-210ENST00000461684 RIMS2Q9UQ26 1411 aa24.51■■□□□ 1.51
CHRD-210ENST00000461684 E9PCH4 1651 aa24.48■■□□□ 1.51
CHRD-210ENST00000461684 PHLPP1O60346 1717 aa24.47■■□□□ 1.51
CHRD-210ENST00000461684 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.46■■□□□ 1.51
CHRD-210ENST00000461684 CHGAP10645 457 aaKnown RBP24.45■■□□□ 1.5
CHRD-210ENST00000461684 SLAIN2Q9P270 581 aa24.45■■□□□ 1.5
CHRD-210ENST00000461684 TBX22Q9Y458 520 aa24.45■■□□□ 1.5
CHRD-210ENST00000461684 IQGAP3Q86VI3 1631 aa24.44■■□□□ 1.5
CHRD-210ENST00000461684 ROCK1Q13464 1354 aa24.43■■□□□ 1.5
CHRD-210ENST00000461684 NCOA3Q9Y6Q9 1424 aa24.42■■□□□ 1.5
CHRD-210ENST00000461684 DIP2AQ14689 1571 aa24.41■■□□□ 1.5
CHRD-210ENST00000461684 POTEAQ6S8J7 498 aa24.38■■□□□ 1.49
CHRD-210ENST00000461684 JCADQ9P266 1359 aa24.38■■□□□ 1.49
CHRD-210ENST00000461684 ADAMTS13Q76LX8 1427 aa24.37■■□□□ 1.49
CHRD-210ENST00000461684 NUTM2DQ5VT03 806 aaPredicted RBP24.37■■□□□ 1.49
CHRD-210ENST00000461684 C14orf37Q86TY3 774 aa24.37■■□□□ 1.49
CHRD-210ENST00000461684 PIK3R4Q99570 1358 aa24.37■■□□□ 1.49
CHRD-210ENST00000461684 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.35■■□□□ 1.49
CHRD-210ENST00000461684 NUP155O75694 1391 aa24.35■■□□□ 1.49
CHRD-210ENST00000461684 COL16A1Q07092 1604 aaPredicted RBP24.34■■□□□ 1.49
CHRD-210ENST00000461684 TRPM2O94759 1503 aa24.33■■□□□ 1.49
CHRD-210ENST00000461684 CADPS2Q86UW7 1296 aa24.32■■□□□ 1.48
CHRD-210ENST00000461684 C19orf44Q9H6X5 657 aa24.31■■□□□ 1.48
CHRD-210ENST00000461684 ATF3P18847 181 aa24.3■■□□□ 1.48
CHRD-210ENST00000461684 SPHKAPQ2M3C7 1700 aa24.3■■□□□ 1.48
CHRD-210ENST00000461684 ITGAEP38570 1179 aa24.29■■□□□ 1.48
CHRD-210ENST00000461684 AHDC1Q5TGY3 1603 aaPredicted RBP24.28■■□□□ 1.48
CHRD-210ENST00000461684 AMOTL2Q9Y2J4 779 aa24.27■■□□□ 1.48
CHRD-210ENST00000461684 SPATA31A6Q5VVP1 1343 aa24.26■■□□□ 1.47
CHRD-210ENST00000461684 SHPRHQ149N8 1683 aa24.25■■□□□ 1.47
CHRD-210ENST00000461684 PTPRUQ92729 1446 aa24.24■■□□□ 1.47
CHRD-210ENST00000461684 NRXN3Q9Y4C0 1643 aa24.23■■□□□ 1.47
CHRD-210ENST00000461684 SETD1AO15047 1707 aaKnown RBP24.23■■□□□ 1.47
CHRD-210ENST00000461684 SETBP1Q9Y6X0 1596 aa24.22■■□□□ 1.47
CHRD-210ENST00000461684 XRN1Q8IZH2 1706 aaKnown RBP24.21■■□□□ 1.47
CHRD-210ENST00000461684 MEX3CQ5U5Q3 659 aaKnown RBP24.21■■□□□ 1.47
CHRD-210ENST00000461684 LRP6O75581 1613 aa24.21■■□□□ 1.47
CHRD-210ENST00000461684 ZNF326Q5BKZ1 582 aaKnown RBP24.2■■□□□ 1.46
CHRD-210ENST00000461684 DCCP43146 1447 aa24.19■■□□□ 1.46
CHRD-210ENST00000461684 ZNF772Q68DY9 489 aaPredicted RBP24.18■■□□□ 1.46
CHRD-210ENST00000461684 BRINP3Q76B58 766 aa24.17■■□□□ 1.46
CHRD-210ENST00000461684 KIF1BO60333 1816 aa24.17■■□□□ 1.46
CHRD-210ENST00000461684 PPARGC1BQ86YN6 1023 aaKnown RBP24.16■■□□□ 1.46
CHRD-210ENST00000461684 CLTCL1P53675 1640 aa24.13■■□□□ 1.45
CHRD-210ENST00000461684 ASXL1Q8IXJ9 1541 aa24.13■■□□□ 1.45
CHRD-210ENST00000461684 NHSL1Q5SYE7 1610 aa24.12■■□□□ 1.45
CHRD-210ENST00000461684 METP08581 1390 aa24.12■■□□□ 1.45
CHRD-210ENST00000461684 MST1RQ04912 1400 aa24.11■■□□□ 1.45
CHRD-210ENST00000461684 NEXMIFQ5QGS0 1516 aa24.11■■□□□ 1.45
CHRD-210ENST00000461684 SETD5Q9C0A6 1442 aa24.09■■□□□ 1.45
CHRD-210ENST00000461684 NUTM2BA6NNL0 878 aaPredicted RBP24.08■■□□□ 1.45
CHRD-210ENST00000461684 NUTM2EB1AL46 878 aaPredicted RBP24.08■■□□□ 1.45
CHRD-210ENST00000461684 NUTM2AQ8IVF1 878 aaPredicted RBP24.08■■□□□ 1.45
CHRD-210ENST00000461684 NALCNQ8IZF0 1738 aa24.07■■□□□ 1.44
CHRD-210ENST00000461684 ADGRL3Q9HAR2 1447 aa24.07■■□□□ 1.44
CHRD-210ENST00000461684 TRIM52Q96A61 297 aa24.06■■□□□ 1.44
CHRD-210ENST00000461684 LRRC59Q96AG4 307 aaKnown RBP24.06■■□□□ 1.44
CHRD-210ENST00000461684 NAIPQ13075 1403 aa24.04■■□□□ 1.44
CHRD-210ENST00000461684 RRBP1Q9P2E9 1410 aaKnown RBP24.04■■□□□ 1.44
CHRD-210ENST00000461684 RXRBP28702 533 aa24.04■■□□□ 1.44
CHRD-210ENST00000461684 VGFO15240 615 aaPredicted RBP24■■□□□ 1.43
CHRD-210ENST00000461684 UPF1Q92900 1129 aaKnown RBP eCLIP24■■□□□ 1.43
CHRD-210ENST00000461684 AFF2P51816 1311 aa24■■□□□ 1.43
CHRD-210ENST00000461684 CDK12Q9NYV4 1490 aaPredicted RBP23.99■■□□□ 1.43
CHRD-210ENST00000461684 PTCH1Q13635 1447 aa23.98■■□□□ 1.43
CHRD-210ENST00000461684 DDX17Q92841 729 aaKnown RBP23.97■■□□□ 1.43
CHRD-210ENST00000461684 C1orf167Q5SNV9 1468 aa23.96■■□□□ 1.43
CHRD-210ENST00000461684 PNPLA6Q8IY17 1366 aa23.96■■□□□ 1.43
CHRD-210ENST00000461684 LAMC1P11047 1609 aa23.95■■□□□ 1.43
CHRD-210ENST00000461684 RPGRIP1LQ68CZ1 1315 aa23.95■■□□□ 1.42
CHRD-210ENST00000461684 PPLO60437 1756 aa23.95■■□□□ 1.42
CHRD-210ENST00000461684 C8orf37Q96NL8 207 aa23.93■■□□□ 1.42
CHRD-210ENST00000461684 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
CHRD-210ENST00000461684 SLC4A1APQ9BWU0 796 aaKnown RBP23.92■■□□□ 1.42
CHRD-210ENST00000461684 ROBO2Q9HCK4 1378 aa23.91■■□□□ 1.42
CHRD-210ENST00000461684 PRAG1Q86YV5 1406 aa23.91■■□□□ 1.42
CHRD-210ENST00000461684 RBM6P78332 1123 aaKnown RBP23.89■■□□□ 1.41
CHRD-210ENST00000461684 QTRT2Q9H974 415 aaKnown RBP23.89■■□□□ 1.41
CHRD-210ENST00000461684 ORAI2Q96SN7 254 aa23.88■■□□□ 1.41
CHRD-210ENST00000461684 SOS2Q07890 1332 aaPredicted RBP23.87■■□□□ 1.41
CHRD-210ENST00000461684 NGLY1Q96IV0 654 aa23.87■■□□□ 1.41
CHRD-210ENST00000461684 ADAMTS2O95450 1211 aa23.86■■□□□ 1.41
CHRD-210ENST00000461684 RGS12O14924 1447 aa23.84■■□□□ 1.41
CHRD-210ENST00000461684 COL22A1Q8NFW1 1626 aaPredicted RBP23.81■■□□□ 1.4
CHRD-210ENST00000461684 CDC42BPGQ6DT37 1551 aa23.81■■□□□ 1.4
CHRD-210ENST00000461684 USP21Q9UK80 565 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms