RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 NUTM2DQ5VT03 806 aaPredicted RBP15.29■□□□□ 0.04
COPS7B-217ENST00000461350 SYNMO15061 1565 aa15.29■□□□□ 0.04
COPS7B-217ENST00000461350 ZC3H13Q5T200 1668 aaKnown RBP15.29■□□□□ 0.04
COPS7B-217ENST00000461350 GPRASP1Q5JY77 1395 aa15.28■□□□□ 0.04
COPS7B-217ENST00000461350 ARID4BQ4LE39 1312 aaPredicted RBP15.28■□□□□ 0.04
COPS7B-217ENST00000461350 SENP3Q9H4L4 574 aaPredicted RBP15.28■□□□□ 0.04
COPS7B-217ENST00000461350 IDI1Q13907 227 aa15.28■□□□□ 0.04
COPS7B-217ENST00000461350 POLR1AO95602 1720 aaPredicted RBP15.28■□□□□ 0.04
COPS7B-217ENST00000461350 REREQ9P2R6 1566 aa15.28■□□□□ 0.04
COPS7B-217ENST00000461350 CFAP70Q5T0N1 1121 aa15.27■□□□□ 0.04
COPS7B-217ENST00000461350 ADGRB3O60242 1522 aa15.27■□□□□ 0.04
COPS7B-217ENST00000461350 AGLP35573 1532 aa15.27■□□□□ 0.04
COPS7B-217ENST00000461350 ARHGAP31Q2M1Z3 1444 aa15.27■□□□□ 0.04
COPS7B-217ENST00000461350 CNGB1Q14028 1251 aaPredicted RBP15.27■□□□□ 0.03
COPS7B-217ENST00000461350 CLTCQ00610 1675 aaKnown RBP15.26■□□□□ 0.03
COPS7B-217ENST00000461350 PREX1Q8TCU6 1659 aa15.24■□□□□ 0.03
COPS7B-217ENST00000461350 DNAJC5Q9H3Z4 198 aa15.24■□□□□ 0.03
COPS7B-217ENST00000461350 NEURL4Q96JN8 1562 aa15.24■□□□□ 0.03
COPS7B-217ENST00000461350 IFT172Q9UG01 1749 aa15.24■□□□□ 0.03
COPS7B-217ENST00000461350 STAC3Q96MF2 364 aa15.23■□□□□ 0.03
COPS7B-217ENST00000461350 FANCIQ9NVI1 1328 aa15.23■□□□□ 0.03
COPS7B-217ENST00000461350 PIK3C2BO00750 1634 aa15.23■□□□□ 0.03
COPS7B-217ENST00000461350 LAMC1P11047 1609 aa15.22■□□□□ 0.03
COPS7B-217ENST00000461350 TESK2Q96S53 571 aa15.22■□□□□ 0.03
COPS7B-217ENST00000461350 ESF1Q9H501 851 aaKnown RBP15.22■□□□□ 0.03
COPS7B-217ENST00000461350 MYOM2P54296 1465 aa15.22■□□□□ 0.03
COPS7B-217ENST00000461350 SLC52A1Q9NWF4 448 aa15.21■□□□□ 0.03
COPS7B-217ENST00000461350 MYO5BQ9ULV0 1848 aa15.21■□□□□ 0.03
COPS7B-217ENST00000461350 PPLO60437 1756 aa15.2■□□□□ 0.02
COPS7B-217ENST00000461350 ERVK-7P63135 1459 aa15.2■□□□□ 0.02
COPS7B-217ENST00000461350 DISP3Q9P2K9 1392 aa15.2■□□□□ 0.02
COPS7B-217ENST00000461350 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
COPS7B-217ENST00000461350 FAM9BQ8IZU0 186 aa15.19■□□□□ 0.02
COPS7B-217ENST00000461350 PPP4R2Q9NY27 417 aa15.19■□□□□ 0.02
COPS7B-217ENST00000461350 TMEM132EQ6IEE7 984 aa15.18■□□□□ 0.02
COPS7B-217ENST00000461350 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
COPS7B-217ENST00000461350 IQGAP1P46940 1657 aa15.18■□□□□ 0.02
COPS7B-217ENST00000461350 CCDC184Q52MB2 194 aa15.18■□□□□ 0.02
COPS7B-217ENST00000461350 SCAF11Q99590 1463 aaKnown RBP15.17■□□□□ 0.02
COPS7B-217ENST00000461350 NRXN1Q9ULB1 1477 aa15.17■□□□□ 0.02
COPS7B-217ENST00000461350 ZMYM3Q14202 1370 aa15.17■□□□□ 0.02
COPS7B-217ENST00000461350 RPGRIP1LQ68CZ1 1315 aa15.16■□□□□ 0.02
COPS7B-217ENST00000461350 PLPPR3Q6T4P5 718 aa15.16■□□□□ 0.02
COPS7B-217ENST00000461350 PRKRIP1Q9H875 184 aaPredicted RBP15.16■□□□□ 0.02
COPS7B-217ENST00000461350 PIK3C2GO75747 1445 aa15.16■□□□□ 0.02
COPS7B-217ENST00000461350 KIAA1210Q9ULL0 1709 aa15.16■□□□□ 0.02
COPS7B-217ENST00000461350 NEXMIFQ5QGS0 1516 aa15.16■□□□□ 0.02
COPS7B-217ENST00000461350 ERICH6BQ5W0A0 696 aa15.16■□□□□ 0.02
COPS7B-217ENST00000461350 MRS2Q9HD23 443 aa15.15■□□□□ 0.02
COPS7B-217ENST00000461350 TMEM131LA2VDJ0 1609 aa15.15■□□□□ 0.02
COPS7B-217ENST00000461350 TMF1P82094 1093 aa15.15■□□□□ 0.02
COPS7B-217ENST00000461350 VGFO15240 615 aaPredicted RBP15.14■□□□□ 0.01
COPS7B-217ENST00000461350 TRAK1Q9UPV9 953 aa15.14■□□□□ 0.01
COPS7B-217ENST00000461350 B4GALNT3Q6L9W6 998 aa15.14■□□□□ 0.01
COPS7B-217ENST00000461350 C14orf93Q9H972 538 aaKnown RBP15.14■□□□□ 0.01
COPS7B-217ENST00000461350 CEBPAP49715 358 aaPredicted RBP15.12■□□□□ 0.01
COPS7B-217ENST00000461350 SPATA31D1Q6ZQQ2 1576 aa15.12■□□□□ 0.01
COPS7B-217ENST00000461350 EIF3AQ14152 1382 aaKnown RBP15.1■□□□□ 0.01
COPS7B-217ENST00000461350 ADGRB1O14514 1584 aa15.08■□□□□ 0.01
COPS7B-217ENST00000461350 STK26Q9P289 416 aa15.08■□□□□ 0
COPS7B-217ENST00000461350 PANK3Q9H999 370 aa15.08■□□□□ 0
COPS7B-217ENST00000461350 A2ML1A8K2U0 1454 aa15.08■□□□□ 0
COPS7B-217ENST00000461350 ZBED9Q6R2W3 1325 aa15.07■□□□□ 0
COPS7B-217ENST00000461350 SETBP1Q9Y6X0 1596 aa15.07■□□□□ 0
COPS7B-217ENST00000461350 TNRQ92752 1358 aa15.06■□□□□ 0
COPS7B-217ENST00000461350 SAFB2Q14151 953 aaKnown RBP eCLIP15.06■□□□□ 0
COPS7B-217ENST00000461350 CENPJQ9HC77 1338 aaPredicted RBP15.06■□□□□ 0
COPS7B-217ENST00000461350 ZFYVE9O95405 1425 aa15.04■□□□□ -0
COPS7B-217ENST00000461350 RIMS2Q9UQ26 1411 aa15.04■□□□□ -0
COPS7B-217ENST00000461350 PER1O15534 1290 aaPredicted RBP15.04■□□□□ -0
COPS7B-217ENST00000461350 CC2D1BQ5T0F9 858 aaKnown RBP15.02■□□□□ -0
COPS7B-217ENST00000461350 ASXL1Q8IXJ9 1541 aa15.02■□□□□ -0
COPS7B-217ENST00000461350 CDCA8Q53HL2 280 aa15.02□□□□□ -0.01
COPS7B-217ENST00000461350 FER1L4A9Z1Z3 1794 aa15.01□□□□□ -0.01
COPS7B-217ENST00000461350 QRICH2Q9H0J4 1663 aa15□□□□□ -0.01
COPS7B-217ENST00000461350 MYO3AQ8NEV4 1616 aa15□□□□□ -0.01
COPS7B-217ENST00000461350 ALKQ9UM73 1620 aa15□□□□□ -0.01
COPS7B-217ENST00000461350 C3P01024 1663 aa14.99□□□□□ -0.01
COPS7B-217ENST00000461350 KDM5AP29375 1690 aaKnown RBP14.99□□□□□ -0.01
COPS7B-217ENST00000461350 ARHGEF28Q8N1W1 1705 aaKnown RBP14.99□□□□□ -0.01
COPS7B-217ENST00000461350 NOP58Q9Y2X3 529 aaKnown RBP14.98□□□□□ -0.01
COPS7B-217ENST00000461350 MYOM1P52179 1685 aa14.98□□□□□ -0.01
COPS7B-217ENST00000461350 DEKP35659 375 aaKnown RBP14.98□□□□□ -0.01
COPS7B-217ENST00000461350 NBR1Q14596 966 aa14.97□□□□□ -0.01
COPS7B-217ENST00000461350 KTN1Q86UP2 1357 aaKnown RBP14.97□□□□□ -0.01
COPS7B-217ENST00000461350 YTHDC2Q9H6S0 1430 aaKnown RBP14.97□□□□□ -0.01
COPS7B-217ENST00000461350 PRAM1Q96QH2 718 aa14.97□□□□□ -0.01
COPS7B-217ENST00000461350 SBNO2Q9Y2G9 1366 aa14.96□□□□□ -0.01
COPS7B-217ENST00000461350 UBR1Q8IWV7 1749 aa14.96□□□□□ -0.01
COPS7B-217ENST00000461350 TMC1Q8TDI8 760 aa14.96□□□□□ -0.01
COPS7B-217ENST00000461350 PTPRMP28827 1452 aa14.96□□□□□ -0.01
COPS7B-217ENST00000461350 SENP3-EIF4A1A0A087X0R7 540 aa14.96□□□□□ -0.02
COPS7B-217ENST00000461350 CCDC136Q96JN2 1154 aa14.95□□□□□ -0.02
COPS7B-217ENST00000461350 KNSTRNQ9Y448 316 aa14.95□□□□□ -0.02
COPS7B-217ENST00000461350 MINK1Q8N4C8 1332 aaPredicted RBP14.95□□□□□ -0.02
COPS7B-217ENST00000461350 RALBP1Q15311 655 aa14.95□□□□□ -0.02
COPS7B-217ENST00000461350 POGKQ9P215 609 aa14.95□□□□□ -0.02
COPS7B-217ENST00000461350 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.95□□□□□ -0.02
COPS7B-217ENST00000461350 TMEM2Q9UHN6 1383 aa14.95□□□□□ -0.02
COPS7B-217ENST00000461350 SLC24A1O60721 1099 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms