RNA–Protein interactions for RNA: ENST00000461306.1

ITGB5-203, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-203ENST00000461306 LMTK2Q8IWU2 1503 aa16.9■□□□□ 0.3
ITGB5-203ENST00000461306 NOS1P29475 1434 aa16.89■□□□□ 0.29
ITGB5-203ENST00000461306 NUTM2DQ5VT03 806 aaPredicted RBP16.89■□□□□ 0.29
ITGB5-203ENST00000461306 C14orf37Q86TY3 774 aa16.88■□□□□ 0.29
ITGB5-203ENST00000461306 HDGFP51858 240 aaKnown RBP16.87■□□□□ 0.29
ITGB5-203ENST00000461306 KDM5AP29375 1690 aaKnown RBP16.87■□□□□ 0.29
ITGB5-203ENST00000461306 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
ITGB5-203ENST00000461306 ADGRB3O60242 1522 aa16.86■□□□□ 0.29
ITGB5-203ENST00000461306 RIMS2Q9UQ26 1411 aa16.84■□□□□ 0.29
ITGB5-203ENST00000461306 NKTRP30414 1462 aaKnown RBP16.84■□□□□ 0.29
ITGB5-203ENST00000461306 PHLPP1O60346 1717 aa16.83■□□□□ 0.28
ITGB5-203ENST00000461306 MEX3CQ5U5Q3 659 aaKnown RBP16.83■□□□□ 0.28
ITGB5-203ENST00000461306 JCADQ9P266 1359 aa16.83■□□□□ 0.28
ITGB5-203ENST00000461306 PLEKHG1Q9ULL1 1385 aa16.83■□□□□ 0.28
ITGB5-203ENST00000461306 ANKRD50Q9ULJ7 1429 aa16.82■□□□□ 0.28
ITGB5-203ENST00000461306 TBX22Q9Y458 520 aa16.82■□□□□ 0.28
ITGB5-203ENST00000461306 MYO5BQ9ULV0 1848 aa16.82■□□□□ 0.28
ITGB5-203ENST00000461306 NWD1Q149M9 1564 aa16.81■□□□□ 0.28
ITGB5-203ENST00000461306 ZFYVE9O95405 1425 aa16.8■□□□□ 0.28
ITGB5-203ENST00000461306 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.8■□□□□ 0.28
ITGB5-203ENST00000461306 CHD2O14647 1828 aaKnown RBP16.8■□□□□ 0.28
ITGB5-203ENST00000461306 ATF3P18847 181 aa16.79■□□□□ 0.28
ITGB5-203ENST00000461306 ADGRL2O95490 1459 aa16.79■□□□□ 0.28
ITGB5-203ENST00000461306 TRIM52Q96A61 297 aa16.78■□□□□ 0.28
ITGB5-203ENST00000461306 GCC2Q8IWJ2 1684 aa16.78■□□□□ 0.28
ITGB5-203ENST00000461306 CADPS2Q86UW7 1296 aa16.77■□□□□ 0.28
ITGB5-203ENST00000461306 C19orf44Q9H6X5 657 aa16.77■□□□□ 0.28
ITGB5-203ENST00000461306 RPRD2Q5VT52 1461 aaKnown RBP16.77■□□□□ 0.28
ITGB5-203ENST00000461306 NUTM2BA6NNL0 878 aaPredicted RBP16.76■□□□□ 0.27
ITGB5-203ENST00000461306 NUTM2EB1AL46 878 aaPredicted RBP16.76■□□□□ 0.27
ITGB5-203ENST00000461306 NUTM2AQ8IVF1 878 aaPredicted RBP16.76■□□□□ 0.27
ITGB5-203ENST00000461306 AMOTL2Q9Y2J4 779 aa16.76■□□□□ 0.27
ITGB5-203ENST00000461306 TMEM131LA2VDJ0 1609 aa16.76■□□□□ 0.27
ITGB5-203ENST00000461306 SPATA31A6Q5VVP1 1343 aa16.74■□□□□ 0.27
ITGB5-203ENST00000461306 ITGAEP38570 1179 aa16.74■□□□□ 0.27
ITGB5-203ENST00000461306 ZNF772Q68DY9 489 aaPredicted RBP16.74■□□□□ 0.27
ITGB5-203ENST00000461306 LRP6O75581 1613 aa16.74■□□□□ 0.27
ITGB5-203ENST00000461306 COL16A1Q07092 1604 aaPredicted RBP16.74■□□□□ 0.27
ITGB5-203ENST00000461306 ADAMTS13Q76LX8 1427 aa16.73■□□□□ 0.27
ITGB5-203ENST00000461306 NCOA3Q9Y6Q9 1424 aa16.72■□□□□ 0.27
ITGB5-203ENST00000461306 UPF1Q92900 1129 aaKnown RBP eCLIP16.72■□□□□ 0.27
ITGB5-203ENST00000461306 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.71■□□□□ 0.27
ITGB5-203ENST00000461306 BRINP3Q76B58 766 aa16.71■□□□□ 0.27
ITGB5-203ENST00000461306 RXRBP28702 533 aa16.7■□□□□ 0.26
ITGB5-203ENST00000461306 NUP155O75694 1391 aa16.69■□□□□ 0.26
ITGB5-203ENST00000461306 ZNF326Q5BKZ1 582 aaKnown RBP16.69■□□□□ 0.26
ITGB5-203ENST00000461306 E9PCH4 1651 aa16.69■□□□□ 0.26
ITGB5-203ENST00000461306 PTPRUQ92729 1446 aa16.68■□□□□ 0.26
ITGB5-203ENST00000461306 PIK3R4Q99570 1358 aa16.67■□□□□ 0.26
ITGB5-203ENST00000461306 SRCAPQ6ZRS2 3230 aa16.66■□□□□ 0.26
ITGB5-203ENST00000461306 PPARGC1BQ86YN6 1023 aaKnown RBP16.66■□□□□ 0.26
ITGB5-203ENST00000461306 UNC13BO14795 1591 aa16.65■□□□□ 0.26
ITGB5-203ENST00000461306 DDX17Q92841 729 aaKnown RBP16.65■□□□□ 0.26
ITGB5-203ENST00000461306 AHDC1Q5TGY3 1603 aaPredicted RBP16.65■□□□□ 0.26
ITGB5-203ENST00000461306 AFF2P51816 1311 aa16.65■□□□□ 0.26
ITGB5-203ENST00000461306 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
ITGB5-203ENST00000461306 TRPM2O94759 1503 aa16.64■□□□□ 0.25
ITGB5-203ENST00000461306 SHPRHQ149N8 1683 aa16.62■□□□□ 0.25
ITGB5-203ENST00000461306 LRRC59Q96AG4 307 aaKnown RBP16.62■□□□□ 0.25
ITGB5-203ENST00000461306 C8orf37Q96NL8 207 aa16.62■□□□□ 0.25
ITGB5-203ENST00000461306 QTRT2Q9H974 415 aaKnown RBP16.61■□□□□ 0.25
ITGB5-203ENST00000461306 ROCK1Q13464 1354 aa16.61■□□□□ 0.25
ITGB5-203ENST00000461306 IQGAP3Q86VI3 1631 aa16.6■□□□□ 0.25
ITGB5-203ENST00000461306 METP08581 1390 aa16.6■□□□□ 0.25
ITGB5-203ENST00000461306 MST1RQ04912 1400 aa16.58■□□□□ 0.24
ITGB5-203ENST00000461306 ASXL1Q8IXJ9 1541 aa16.58■□□□□ 0.24
ITGB5-203ENST00000461306 ADAMTS2O95450 1211 aa16.57■□□□□ 0.24
ITGB5-203ENST00000461306 DCCP43146 1447 aa16.56■□□□□ 0.24
ITGB5-203ENST00000461306 SETD5Q9C0A6 1442 aa16.56■□□□□ 0.24
ITGB5-203ENST00000461306 NGLY1Q96IV0 654 aa16.56■□□□□ 0.24
ITGB5-203ENST00000461306 CDK12Q9NYV4 1490 aaPredicted RBP16.55■□□□□ 0.24
ITGB5-203ENST00000461306 RBM6P78332 1123 aaKnown RBP16.55■□□□□ 0.24
ITGB5-203ENST00000461306 NRXN3Q9Y4C0 1643 aa16.55■□□□□ 0.24
ITGB5-203ENST00000461306 PNPLA6Q8IY17 1366 aa16.53■□□□□ 0.24
ITGB5-203ENST00000461306 ORAI2Q96SN7 254 aa16.53■□□□□ 0.24
ITGB5-203ENST00000461306 XRN1Q8IZH2 1706 aaKnown RBP16.53■□□□□ 0.24
ITGB5-203ENST00000461306 SETBP1Q9Y6X0 1596 aa16.52■□□□□ 0.24
ITGB5-203ENST00000461306 RGS12O14924 1447 aa16.52■□□□□ 0.23
ITGB5-203ENST00000461306 ADGRL3Q9HAR2 1447 aa16.52■□□□□ 0.23
ITGB5-203ENST00000461306 NHSL1Q5SYE7 1610 aa16.51■□□□□ 0.23
ITGB5-203ENST00000461306 SPHKAPQ2M3C7 1700 aa16.5■□□□□ 0.23
ITGB5-203ENST00000461306 C1orf167Q5SNV9 1468 aa16.48■□□□□ 0.23
ITGB5-203ENST00000461306 USP21Q9UK80 565 aa16.48■□□□□ 0.23
ITGB5-203ENST00000461306 VGFO15240 615 aaPredicted RBP16.47■□□□□ 0.23
ITGB5-203ENST00000461306 NEXMIFQ5QGS0 1516 aa16.46■□□□□ 0.23
ITGB5-203ENST00000461306 CLTCL1P53675 1640 aa16.46■□□□□ 0.23
ITGB5-203ENST00000461306 NALCNQ8IZF0 1738 aa16.46■□□□□ 0.23
ITGB5-203ENST00000461306 ROBO2Q9HCK4 1378 aa16.45■□□□□ 0.22
ITGB5-203ENST00000461306 TRPC5Q9UL62 973 aaPredicted RBP16.44■□□□□ 0.22
ITGB5-203ENST00000461306 SOS2Q07890 1332 aaPredicted RBP16.44■□□□□ 0.22
ITGB5-203ENST00000461306 ESCO1Q5FWF5 840 aa16.43■□□□□ 0.22
ITGB5-203ENST00000461306 KIF1BO60333 1816 aa16.42■□□□□ 0.22
ITGB5-203ENST00000461306 XPCQ01831 940 aaPredicted RBP16.42■□□□□ 0.22
ITGB5-203ENST00000461306 NUTM2FA1L443 756 aa16.41■□□□□ 0.22
ITGB5-203ENST00000461306 EP400Q96L91 3159 aa16.41■□□□□ 0.22
ITGB5-203ENST00000461306 ATAD2Q6PL18 1390 aa16.4■□□□□ 0.22
ITGB5-203ENST00000461306 FNBP4Q8N3X1 1017 aaPredicted RBP16.4■□□□□ 0.22
ITGB5-203ENST00000461306 FOXO3O43524 673 aa16.39■□□□□ 0.21
ITGB5-203ENST00000461306 SLC4A1APQ9BWU0 796 aaKnown RBP16.39■□□□□ 0.21
ITGB5-203ENST00000461306 STK26Q9P289 416 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms