RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 DAXXQ9UER7 740 aaPredicted RBP20.39■□□□□ 0.85
SSR4-206ENST00000460616 SIGLEC1Q9BZZ2 1709 aa20.38■□□□□ 0.85
SSR4-206ENST00000460616 KTN1Q86UP2 1357 aaKnown RBP20.38■□□□□ 0.85
SSR4-206ENST00000460616 EIF5BO60841 1220 aaKnown RBP20.37■□□□□ 0.85
SSR4-206ENST00000460616 A2MP01023 1474 aa20.36■□□□□ 0.85
SSR4-206ENST00000460616 SLC4A3P48751 1232 aa20.36■□□□□ 0.85
SSR4-206ENST00000460616 SKAP1Q86WV1 359 aa20.36■□□□□ 0.85
SSR4-206ENST00000460616 ERBINQ96RT1 1412 aa20.35■□□□□ 0.85
SSR4-206ENST00000460616 PLIN1O60240 522 aa20.35■□□□□ 0.85
SSR4-206ENST00000460616 ARHGEF40Q8TER5 1519 aa20.34■□□□□ 0.85
SSR4-206ENST00000460616 CDCA7LQ96GN5 454 aa20.33■□□□□ 0.85
SSR4-206ENST00000460616 MAGI2Q86UL8 1455 aa20.32■□□□□ 0.84
SSR4-206ENST00000460616 CARD11Q9BXL7 1154 aa20.32■□□□□ 0.84
SSR4-206ENST00000460616 UNC13BO14795 1591 aa20.32■□□□□ 0.84
SSR4-206ENST00000460616 CRBNQ96SW2 442 aa20.32■□□□□ 0.84
SSR4-206ENST00000460616 EIF2AK4Q9P2K8 1649 aaKnown RBP20.31■□□□□ 0.84
SSR4-206ENST00000460616 PZPP20742 1482 aa20.3■□□□□ 0.84
SSR4-206ENST00000460616 NLRP13Q86W25 1043 aa20.3■□□□□ 0.84
SSR4-206ENST00000460616 MROH1Q8NDA8 1641 aa20.29■□□□□ 0.84
SSR4-206ENST00000460616 KIF3BO15066 747 aa20.29■□□□□ 0.84
SSR4-206ENST00000460616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.29■□□□□ 0.84
SSR4-206ENST00000460616 DEPDC5O75140 1603 aa20.29■□□□□ 0.84
SSR4-206ENST00000460616 ATP10AO60312 1499 aa20.28■□□□□ 0.84
SSR4-206ENST00000460616 ST20-MTHFSA0A0A6YYL1 179 aa20.28■□□□□ 0.84
SSR4-206ENST00000460616 NUP155O75694 1391 aa20.27■□□□□ 0.84
SSR4-206ENST00000460616 PKD2Q13563 968 aa20.27■□□□□ 0.83
SSR4-206ENST00000460616 KDM5DQ9BY66 1539 aa20.25■□□□□ 0.83
SSR4-206ENST00000460616 RNF17Q9BXT8 1623 aaKnown RBP20.25■□□□□ 0.83
SSR4-206ENST00000460616 RSPH6AQ9H0K4 717 aa20.25■□□□□ 0.83
SSR4-206ENST00000460616 UHRF1BP1Q6BDS2 1440 aa20.24■□□□□ 0.83
SSR4-206ENST00000460616 FAM135AQ9P2D6 1515 aa20.24■□□□□ 0.83
SSR4-206ENST00000460616 FRAT2O75474 233 aaPredicted RBP20.24■□□□□ 0.83
SSR4-206ENST00000460616 REREQ9P2R6 1566 aa20.23■□□□□ 0.83
SSR4-206ENST00000460616 IQGAP3Q86VI3 1631 aa20.23■□□□□ 0.83
SSR4-206ENST00000460616 PRDM15P57071 1507 aaPredicted RBP20.23■□□□□ 0.83
SSR4-206ENST00000460616 RALGAPBQ86X10 1494 aa20.23■□□□□ 0.83
SSR4-206ENST00000460616 FAM43AQ8N2R8 423 aa20.23■□□□□ 0.83
SSR4-206ENST00000460616 CEP152O94986 1710 aa20.23■□□□□ 0.83
SSR4-206ENST00000460616 FAM161AQ3B820 660 aa20.22■□□□□ 0.83
SSR4-206ENST00000460616 KDM2BQ8NHM5 1336 aa20.22■□□□□ 0.83
SSR4-206ENST00000460616 GGT6Q6P531 493 aa20.21■□□□□ 0.83
SSR4-206ENST00000460616 PARD3Q8TEW0 1356 aa20.21■□□□□ 0.83
SSR4-206ENST00000460616 CENPQQ7L2Z9 268 aaPredicted RBP20.2■□□□□ 0.82
SSR4-206ENST00000460616 C20orf194Q5TEA3 1177 aa20.19■□□□□ 0.82
SSR4-206ENST00000460616 KDM2AQ9Y2K7 1162 aa20.19■□□□□ 0.82
SSR4-206ENST00000460616 VWDEQ8N2E2 1590 aa20.19■□□□□ 0.82
SSR4-206ENST00000460616 C8orf34Q49A92 452 aa20.18■□□□□ 0.82
SSR4-206ENST00000460616 DCAF11Q8TEB1 546 aa20.17■□□□□ 0.82
SSR4-206ENST00000460616 AGLP35573 1532 aa20.17■□□□□ 0.82
SSR4-206ENST00000460616 MLECQ14165 292 aa20.16■□□□□ 0.82
SSR4-206ENST00000460616 E9PCH4 1651 aa20.15■□□□□ 0.82
SSR4-206ENST00000460616 PER1O15534 1290 aaPredicted RBP20.13■□□□□ 0.81
SSR4-206ENST00000460616 TET3O43151 1660 aa20.13■□□□□ 0.81
SSR4-206ENST00000460616 CFAP65Q6ZU64 1925 aaKnown RBP20.13■□□□□ 0.81
SSR4-206ENST00000460616 INSRP06213 1382 aa20.12■□□□□ 0.81
SSR4-206ENST00000460616 ABCC3O15438 1527 aa20.12■□□□□ 0.81
SSR4-206ENST00000460616 KANK1Q14678 1352 aa20.11■□□□□ 0.81
SSR4-206ENST00000460616 BLMP54132 1417 aaPredicted RBP20.11■□□□□ 0.81
SSR4-206ENST00000460616 CLTCQ00610 1675 aaKnown RBP20.1■□□□□ 0.81
SSR4-206ENST00000460616 CAMSAP1Q5T5Y3 1602 aa20.1■□□□□ 0.81
SSR4-206ENST00000460616 CC2D1BQ5T0F9 858 aaKnown RBP20.1■□□□□ 0.81
SSR4-206ENST00000460616 EFCAB6Q5THR3 1501 aa20.08■□□□□ 0.81
SSR4-206ENST00000460616 RGS3P49796 1198 aa20.08■□□□□ 0.81
SSR4-206ENST00000460616 ZC3H13Q5T200 1668 aaKnown RBP20.07■□□□□ 0.8
SSR4-206ENST00000460616 LMTK2Q8IWU2 1503 aa20.07■□□□□ 0.8
SSR4-206ENST00000460616 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.04■□□□□ 0.8
SSR4-206ENST00000460616 SPHKAPQ2M3C7 1700 aa20.04■□□□□ 0.8
SSR4-206ENST00000460616 PLA2R1Q13018 1463 aa20.04■□□□□ 0.8
SSR4-206ENST00000460616 NPATQ14207 1427 aa20.03■□□□□ 0.8
SSR4-206ENST00000460616 POGKQ9P215 609 aa20.02■□□□□ 0.8
SSR4-206ENST00000460616 ADAMTS8Q9UP79 889 aa20.02■□□□□ 0.8
SSR4-206ENST00000460616 DUSP27Q5VZP5 1158 aa20.02■□□□□ 0.8
SSR4-206ENST00000460616 FER1L4A9Z1Z3 1794 aa20.01■□□□□ 0.79
SSR4-206ENST00000460616 PANK3Q9H999 370 aa20■□□□□ 0.79
SSR4-206ENST00000460616 UGGT1Q9NYU2 1555 aa19.99■□□□□ 0.79
SSR4-206ENST00000460616 L1TD1Q5T7N2 865 aaKnown RBP19.98■□□□□ 0.79
SSR4-206ENST00000460616 RRAGDQ9NQL2 400 aaPredicted RBP19.98■□□□□ 0.79
SSR4-206ENST00000460616 GOLGA2Q08379 1002 aa19.97■□□□□ 0.79
SSR4-206ENST00000460616 PREX1Q8TCU6 1659 aa19.96■□□□□ 0.79
SSR4-206ENST00000460616 MADDQ8WXG6 1647 aa19.96■□□□□ 0.79
SSR4-206ENST00000460616 CLTCL1P53675 1640 aa19.96■□□□□ 0.79
SSR4-206ENST00000460616 BECN1Q14457 450 aa19.96■□□□□ 0.79
SSR4-206ENST00000460616 TRPM2O94759 1503 aa19.95■□□□□ 0.78
SSR4-206ENST00000460616 NBPF1Q3BBV0 1214 aa19.95■□□□□ 0.78
SSR4-206ENST00000460616 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.78
SSR4-206ENST00000460616 USP19O94966 1318 aa19.95■□□□□ 0.78
SSR4-206ENST00000460616 FBXO31Q5XUX0 539 aaPredicted RBP19.94■□□□□ 0.78
SSR4-206ENST00000460616 PTPRTO14522 1441 aa19.94■□□□□ 0.78
SSR4-206ENST00000460616 SYNMO15061 1565 aa19.94■□□□□ 0.78
SSR4-206ENST00000460616 WDR43Q15061 677 aaKnown RBP eCLIP19.93■□□□□ 0.78
SSR4-206ENST00000460616 RIMS1Q86UR5 1692 aaKnown RBP19.93■□□□□ 0.78
SSR4-206ENST00000460616 ARHGAP31Q2M1Z3 1444 aa19.93■□□□□ 0.78
SSR4-206ENST00000460616 CCDC144AA2RUR9 1427 aa19.92■□□□□ 0.78
SSR4-206ENST00000460616 ZNF521Q96K83 1311 aa19.92■□□□□ 0.78
SSR4-206ENST00000460616 ADAMTSL3P82987 1691 aa19.92■□□□□ 0.78
SSR4-206ENST00000460616 TESK2Q96S53 571 aa19.92■□□□□ 0.78
SSR4-206ENST00000460616 SLKQ9H2G2 1235 aaPredicted RBP19.92■□□□□ 0.78
SSR4-206ENST00000460616 ESF1Q9H501 851 aaKnown RBP19.92■□□□□ 0.78
SSR4-206ENST00000460616 PPP6R1Q9UPN7 881 aa19.92■□□□□ 0.78
SSR4-206ENST00000460616 DISP3Q9P2K9 1392 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms