RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 ANKLE2Q86XL3 938 aa23.56■■□□□ 1.36
YIPF3-205ENST00000460547 PRAG1Q86YV5 1406 aa23.55■■□□□ 1.36
YIPF3-205ENST00000460547 STAG3Q9UJ98 1225 aa23.55■■□□□ 1.36
YIPF3-205ENST00000460547 CFAP65Q6ZU64 1925 aaKnown RBP23.55■■□□□ 1.36
YIPF3-205ENST00000460547 TRPM1Q7Z4N2 1603 aa23.54■■□□□ 1.36
YIPF3-205ENST00000460547 LAMC1P11047 1609 aa23.53■■□□□ 1.36
YIPF3-205ENST00000460547 EFCAB6Q5THR3 1501 aa23.52■■□□□ 1.36
YIPF3-205ENST00000460547 C11orf95C9JLR9 678 aaPredicted RBP23.52■■□□□ 1.36
YIPF3-205ENST00000460547 GTF3C3Q9Y5Q9 886 aa23.51■■□□□ 1.35
YIPF3-205ENST00000460547 KIF7Q2M1P5 1343 aa23.51■■□□□ 1.35
YIPF3-205ENST00000460547 SPHKAPQ2M3C7 1700 aa23.51■■□□□ 1.35
YIPF3-205ENST00000460547 IDI1Q13907 227 aa23.51■■□□□ 1.35
YIPF3-205ENST00000460547 ZNF326Q5BKZ1 582 aaKnown RBP23.51■■□□□ 1.35
YIPF3-205ENST00000460547 DCAF11Q8TEB1 546 aa23.51■■□□□ 1.35
YIPF3-205ENST00000460547 SLC52A1Q9NWF4 448 aa23.5■■□□□ 1.35
YIPF3-205ENST00000460547 GPRASP1Q5JY77 1395 aa23.49■■□□□ 1.35
YIPF3-205ENST00000460547 NEURL4Q96JN8 1562 aa23.48■■□□□ 1.35
YIPF3-205ENST00000460547 NOS1P29475 1434 aa23.48■■□□□ 1.35
YIPF3-205ENST00000460547 CARD11Q9BXL7 1154 aa23.46■■□□□ 1.35
YIPF3-205ENST00000460547 CERKQ8TCT0 537 aa23.45■■□□□ 1.34
YIPF3-205ENST00000460547 KDM2AQ9Y2K7 1162 aa23.44■■□□□ 1.34
YIPF3-205ENST00000460547 EID1Q9Y6B2 187 aa23.44■■□□□ 1.34
YIPF3-205ENST00000460547 ROCK2O75116 1388 aaKnown RBP23.43■■□□□ 1.34
YIPF3-205ENST00000460547 CLTCL1P53675 1640 aa23.42■■□□□ 1.34
YIPF3-205ENST00000460547 TXNDC2Q86VQ3 553 aa23.42■■□□□ 1.34
YIPF3-205ENST00000460547 ILDR1Q86SU0 546 aaPredicted RBP23.41■■□□□ 1.34
YIPF3-205ENST00000460547 SYNMO15061 1565 aa23.4■■□□□ 1.34
YIPF3-205ENST00000460547 UBR1Q8IWV7 1749 aa23.39■■□□□ 1.34
YIPF3-205ENST00000460547 STAC3Q96MF2 364 aa23.39■■□□□ 1.34
YIPF3-205ENST00000460547 CHGAP10645 457 aaKnown RBP23.38■■□□□ 1.33
YIPF3-205ENST00000460547 FBXO41Q8TF61 875 aa23.38■■□□□ 1.33
YIPF3-205ENST00000460547 PIK3C2BO00750 1634 aa23.38■■□□□ 1.33
YIPF3-205ENST00000460547 NPHP4O75161 1426 aaPredicted RBP23.38■■□□□ 1.33
YIPF3-205ENST00000460547 ZNF335Q9H4Z2 1342 aaPredicted RBP23.38■■□□□ 1.33
YIPF3-205ENST00000460547 LTKP29376 864 aa23.38■■□□□ 1.33
YIPF3-205ENST00000460547 TMEM2Q9UHN6 1383 aa23.37■■□□□ 1.33
YIPF3-205ENST00000460547 RGL3Q3MIN7 710 aa23.37■■□□□ 1.33
YIPF3-205ENST00000460547 MED14O60244 1454 aa23.36■■□□□ 1.33
YIPF3-205ENST00000460547 SCAF11Q99590 1463 aaKnown RBP23.34■■□□□ 1.33
YIPF3-205ENST00000460547 ARHGAP23Q9P227 1491 aa23.34■■□□□ 1.33
YIPF3-205ENST00000460547 HDGFP51858 240 aaKnown RBP23.34■■□□□ 1.33
YIPF3-205ENST00000460547 SLIT1O75093 1534 aa23.34■■□□□ 1.33
YIPF3-205ENST00000460547 PRKRIP1Q9H875 184 aaPredicted RBP23.33■■□□□ 1.33
YIPF3-205ENST00000460547 ST20-MTHFSA0A0A6YYL1 179 aa23.32■■□□□ 1.32
YIPF3-205ENST00000460547 ADGRB3O60242 1522 aa23.31■■□□□ 1.32
YIPF3-205ENST00000460547 KDM5AP29375 1690 aaKnown RBP23.3■■□□□ 1.32
YIPF3-205ENST00000460547 LTBP4Q8N2S1 1624 aa23.29■■□□□ 1.32
YIPF3-205ENST00000460547 BCANQ96GW7 911 aa23.29■■□□□ 1.32
YIPF3-205ENST00000460547 MYOM2P54296 1465 aa23.27■■□□□ 1.32
YIPF3-205ENST00000460547 NBPF1Q3BBV0 1214 aa23.27■■□□□ 1.32
YIPF3-205ENST00000460547 KIAA1210Q9ULL0 1709 aa23.26■■□□□ 1.31
YIPF3-205ENST00000460547 IQGAP1P46940 1657 aa23.26■■□□□ 1.31
YIPF3-205ENST00000460547 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.25■■□□□ 1.31
YIPF3-205ENST00000460547 KIF1BO60333 1816 aa23.23■■□□□ 1.31
YIPF3-205ENST00000460547 RIMS2Q9UQ26 1411 aa23.23■■□□□ 1.31
YIPF3-205ENST00000460547 IFT172Q9UG01 1749 aa23.23■■□□□ 1.31
YIPF3-205ENST00000460547 TMEM131LA2VDJ0 1609 aa23.22■■□□□ 1.31
YIPF3-205ENST00000460547 SLC26A8Q96RN1 970 aa23.21■■□□□ 1.31
YIPF3-205ENST00000460547 NUTM2DQ5VT03 806 aaPredicted RBP23.2■■□□□ 1.3
YIPF3-205ENST00000460547 SENP3Q9H4L4 574 aaPredicted RBP23.2■■□□□ 1.3
YIPF3-205ENST00000460547 IQSEC2Q5JU85 1478 aa23.19■■□□□ 1.3
YIPF3-205ENST00000460547 TESK2Q96S53 571 aa23.19■■□□□ 1.3
YIPF3-205ENST00000460547 ZFYVE9O95405 1425 aa23.18■■□□□ 1.3
YIPF3-205ENST00000460547 NRXN1Q9ULB1 1477 aa23.18■■□□□ 1.3
YIPF3-205ENST00000460547 CPS1P31327 1500 aa23.18■■□□□ 1.3
YIPF3-205ENST00000460547 KTN1Q86UP2 1357 aaKnown RBP23.17■■□□□ 1.3
YIPF3-205ENST00000460547 PLEKHG1Q9ULL1 1385 aa23.16■■□□□ 1.3
YIPF3-205ENST00000460547 POLR3GLQ9BT43 218 aa23.14■■□□□ 1.29
YIPF3-205ENST00000460547 MYO5BQ9ULV0 1848 aa23.13■■□□□ 1.29
YIPF3-205ENST00000460547 UBAP1LF5GYI3 381 aa23.13■■□□□ 1.29
YIPF3-205ENST00000460547 CCDC184Q52MB2 194 aa23.12■■□□□ 1.29
YIPF3-205ENST00000460547 MRS2Q9HD23 443 aa23.12■■□□□ 1.29
YIPF3-205ENST00000460547 DISP3Q9P2K9 1392 aa23.12■■□□□ 1.29
YIPF3-205ENST00000460547 KCNA6P17658 529 aa23.11■■□□□ 1.29
YIPF3-205ENST00000460547 TBX22Q9Y458 520 aa23.1■■□□□ 1.29
YIPF3-205ENST00000460547 TMF1P82094 1093 aa23.09■■□□□ 1.29
YIPF3-205ENST00000460547 EIF3AQ14152 1382 aaKnown RBP23.08■■□□□ 1.29
YIPF3-205ENST00000460547 TOM1O60784 492 aa23.08■■□□□ 1.29
YIPF3-205ENST00000460547 SETBP1Q9Y6X0 1596 aa23.07■■□□□ 1.28
YIPF3-205ENST00000460547 PPLO60437 1756 aa23.07■■□□□ 1.28
YIPF3-205ENST00000460547 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
YIPF3-205ENST00000460547 RPGRIP1LQ68CZ1 1315 aa23.05■■□□□ 1.28
YIPF3-205ENST00000460547 LRRC7Q96NW7 1537 aa23.05■■□□□ 1.28
YIPF3-205ENST00000460547 VGFO15240 615 aaPredicted RBP23.05■■□□□ 1.28
YIPF3-205ENST00000460547 PROSER2Q86WR7 435 aaPredicted RBP23.05■■□□□ 1.28
YIPF3-205ENST00000460547 RALBP1Q15311 655 aa23.04■■□□□ 1.28
YIPF3-205ENST00000460547 ADGRF5Q8IZF2 1346 aa23.03■■□□□ 1.28
YIPF3-205ENST00000460547 PIK3C2GO75747 1445 aa23.02■■□□□ 1.28
YIPF3-205ENST00000460547 STRCP1A6NGW2 1772 aa23.02■■□□□ 1.28
YIPF3-205ENST00000460547 ADAMTS13Q76LX8 1427 aa23.01■■□□□ 1.27
YIPF3-205ENST00000460547 PARD3Q8TEW0 1356 aa23.01■■□□□ 1.27
YIPF3-205ENST00000460547 PIP4K2BP78356 416 aa23■■□□□ 1.27
YIPF3-205ENST00000460547 BRD4O60885 1362 aaPredicted RBP23■■□□□ 1.27
YIPF3-205ENST00000460547 PER1O15534 1290 aaPredicted RBP23■■□□□ 1.27
YIPF3-205ENST00000460547 SLC24A1O60721 1099 aa23■■□□□ 1.27
YIPF3-205ENST00000460547 CDCA8Q53HL2 280 aa23■■□□□ 1.27
YIPF3-205ENST00000460547 SUPT16HQ9Y5B9 1047 aaKnown RBP23■■□□□ 1.27
YIPF3-205ENST00000460547 MYBBP1AQ9BQG0 1328 aaKnown RBP22.99■■□□□ 1.27
YIPF3-205ENST00000460547 PIK3R4Q99570 1358 aa22.98■■□□□ 1.27
YIPF3-205ENST00000460547 TMEM94Q12767 1356 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms