RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 DIP2BQ9P265 1576 aa13.31□□□□□ -0.28
EPB41-208ENST00000460378 TBX22Q9Y458 520 aa13.31□□□□□ -0.28
EPB41-208ENST00000460378 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
EPB41-208ENST00000460378 TMEM132EQ6IEE7 984 aa13.3□□□□□ -0.28
EPB41-208ENST00000460378 COG3Q96JB2 828 aa13.3□□□□□ -0.28
EPB41-208ENST00000460378 KRT28Q7Z3Y7 464 aa13.3□□□□□ -0.28
EPB41-208ENST00000460378 NUTM2GQ5VZR2 741 aa13.29□□□□□ -0.28
EPB41-208ENST00000460378 ARAP3Q8WWN8 1544 aa13.29□□□□□ -0.28
EPB41-208ENST00000460378 RAPGEF4Q8WZA2 1011 aa13.29□□□□□ -0.28
EPB41-208ENST00000460378 ROCK2O75116 1388 aaKnown RBP13.29□□□□□ -0.28
EPB41-208ENST00000460378 GLI2P10070 1586 aa13.28□□□□□ -0.28
EPB41-208ENST00000460378 CFAP43Q8NDM7 1665 aa13.28□□□□□ -0.28
EPB41-208ENST00000460378 PRAM1Q96QH2 718 aa13.27□□□□□ -0.28
EPB41-208ENST00000460378 USP21Q9UK80 565 aa13.27□□□□□ -0.28
EPB41-208ENST00000460378 ANKRD30BQ9BXX2 1392 aa13.27□□□□□ -0.28
EPB41-208ENST00000460378 DAPK1P53355 1430 aa13.27□□□□□ -0.29
EPB41-208ENST00000460378 BCL11BQ9C0K0 894 aaPredicted RBP13.27□□□□□ -0.29
EPB41-208ENST00000460378 PCF11O94913 1555 aaKnown RBP13.27□□□□□ -0.29
EPB41-208ENST00000460378 ERBINQ96RT1 1412 aa13.27□□□□□ -0.29
EPB41-208ENST00000460378 RIMS2Q9UQ26 1411 aa13.27□□□□□ -0.29
EPB41-208ENST00000460378 ZNF330Q9Y3S2 320 aaPredicted RBP13.26□□□□□ -0.29
EPB41-208ENST00000460378 WASHC2AQ641Q2 1341 aa13.26□□□□□ -0.29
EPB41-208ENST00000460378 HSPA1LP34931 641 aa13.26□□□□□ -0.29
EPB41-208ENST00000460378 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
EPB41-208ENST00000460378 TRPC5Q9UL62 973 aaPredicted RBP13.26□□□□□ -0.29
EPB41-208ENST00000460378 QTRT2Q9H974 415 aaKnown RBP13.25□□□□□ -0.29
EPB41-208ENST00000460378 ATP7AQ04656 1500 aa13.25□□□□□ -0.29
EPB41-208ENST00000460378 GTF2E1P29083 439 aaPredicted RBP13.24□□□□□ -0.29
EPB41-208ENST00000460378 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
EPB41-208ENST00000460378 PNNQ9H307 717 aaKnown RBP13.24□□□□□ -0.29
EPB41-208ENST00000460378 HFM1A2PYH4 1435 aa13.23□□□□□ -0.29
EPB41-208ENST00000460378 WDR43Q15061 677 aaKnown RBP eCLIP13.23□□□□□ -0.29
EPB41-208ENST00000460378 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
EPB41-208ENST00000460378 MORC1Q86VD1 984 aa13.23□□□□□ -0.29
EPB41-208ENST00000460378 MLH3Q9UHC1 1453 aa13.23□□□□□ -0.29
EPB41-208ENST00000460378 CENPJQ9HC77 1338 aaPredicted RBP13.22□□□□□ -0.29
EPB41-208ENST00000460378 DUOX2Q9NRD8 1548 aa13.22□□□□□ -0.29
EPB41-208ENST00000460378 ZC3H6P61129 1189 aaKnown RBP13.22□□□□□ -0.29
EPB41-208ENST00000460378 TMEM94Q12767 1356 aa13.22□□□□□ -0.29
EPB41-208ENST00000460378 C1orf141Q5JVX7 400 aa13.22□□□□□ -0.29
EPB41-208ENST00000460378 SHROOM2Q13796 1616 aa13.21□□□□□ -0.29
EPB41-208ENST00000460378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.21□□□□□ -0.3
EPB41-208ENST00000460378 NLRP1Q9C000 1473 aa13.2□□□□□ -0.3
EPB41-208ENST00000460378 MAPK8IP3Q9UPT6 1336 aa13.2□□□□□ -0.3
EPB41-208ENST00000460378 ITSN2Q9NZM3 1697 aa13.2□□□□□ -0.3
EPB41-208ENST00000460378 U2SURPO15042 1029 aaKnown RBP13.2□□□□□ -0.3
EPB41-208ENST00000460378 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
EPB41-208ENST00000460378 NPATQ14207 1427 aa13.19□□□□□ -0.3
EPB41-208ENST00000460378 CFAP70Q5T0N1 1121 aa13.19□□□□□ -0.3
EPB41-208ENST00000460378 G3V3G9 751 aa13.19□□□□□ -0.3
EPB41-208ENST00000460378 DCAF8Q5TAQ9 597 aa13.19□□□□□ -0.3
EPB41-208ENST00000460378 KCNH5Q8NCM2 988 aa13.18□□□□□ -0.3
EPB41-208ENST00000460378 POLD1P28340 1107 aa13.18□□□□□ -0.3
EPB41-208ENST00000460378 TMEM2Q9UHN6 1383 aa13.18□□□□□ -0.3
EPB41-208ENST00000460378 TIAM1Q13009 1591 aa13.17□□□□□ -0.3
EPB41-208ENST00000460378 C11orf95C9JLR9 678 aaPredicted RBP13.17□□□□□ -0.3
EPB41-208ENST00000460378 EXOC5O00471 708 aa13.16□□□□□ -0.3
EPB41-208ENST00000460378 HECW2Q9P2P5 1572 aa13.16□□□□□ -0.3
EPB41-208ENST00000460378 UGGT1Q9NYU2 1555 aa13.16□□□□□ -0.3
EPB41-208ENST00000460378 MYO5CQ9NQX4 1742 aa13.16□□□□□ -0.3
EPB41-208ENST00000460378 NEFLP07196 543 aa13.15□□□□□ -0.3
EPB41-208ENST00000460378 TATP17735 454 aaPredicted RBP13.15□□□□□ -0.31
EPB41-208ENST00000460378 CDK19Q9BWU1 502 aa13.15□□□□□ -0.31
EPB41-208ENST00000460378 WAPLQ7Z5K2 1190 aa13.14□□□□□ -0.31
EPB41-208ENST00000460378 RPRD2Q5VT52 1461 aaKnown RBP13.14□□□□□ -0.31
EPB41-208ENST00000460378 ABCC5O15440 1437 aa13.14□□□□□ -0.31
EPB41-208ENST00000460378 ANP32CO43423 234 aa13.14□□□□□ -0.31
EPB41-208ENST00000460378 RBM6P78332 1123 aaKnown RBP13.14□□□□□ -0.31
EPB41-208ENST00000460378 SCAF11Q99590 1463 aaKnown RBP13.13□□□□□ -0.31
EPB41-208ENST00000460378 CANXP27824 592 aaKnown RBP13.13□□□□□ -0.31
EPB41-208ENST00000460378 DDX54Q8TDD1 881 aaKnown RBP13.13□□□□□ -0.31
EPB41-208ENST00000460378 JCADQ9P266 1359 aa13.13□□□□□ -0.31
EPB41-208ENST00000460378 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
EPB41-208ENST00000460378 CCDC61Q9Y6R9 512 aa13.13□□□□□ -0.31
EPB41-208ENST00000460378 ROCK1Q13464 1354 aa13.13□□□□□ -0.31
EPB41-208ENST00000460378 A2ML1A8K2U0 1454 aa13.13□□□□□ -0.31
EPB41-208ENST00000460378 SIN3AQ96ST3 1273 aa13.13□□□□□ -0.31
EPB41-208ENST00000460378 RAB3GAP2Q9H2M9 1393 aa13.12□□□□□ -0.31
EPB41-208ENST00000460378 SMG6Q86US8 1419 aaKnown RBP13.12□□□□□ -0.31
EPB41-208ENST00000460378 TTC5Q8N0Z6 440 aa13.12□□□□□ -0.31
EPB41-208ENST00000460378 NUDT16Q96DE0 195 aaKnown RBP13.12□□□□□ -0.31
EPB41-208ENST00000460378 CHMP4AQ9BY43 222 aa13.12□□□□□ -0.31
EPB41-208ENST00000460378 CABP2Q9NPB3 220 aa13.11□□□□□ -0.31
EPB41-208ENST00000460378 LTKP29376 864 aa13.1□□□□□ -0.31
EPB41-208ENST00000460378 SPATA31A6Q5VVP1 1343 aa13.1□□□□□ -0.31
EPB41-208ENST00000460378 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
EPB41-208ENST00000460378 SAMD9Q5K651 1589 aa13.09□□□□□ -0.31
EPB41-208ENST00000460378 PTPRTO14522 1441 aa13.08□□□□□ -0.31
EPB41-208ENST00000460378 C16orf71Q8IYS4 520 aaPredicted RBP13.08□□□□□ -0.32
EPB41-208ENST00000460378 NCOA1Q15788 1441 aa13.08□□□□□ -0.32
EPB41-208ENST00000460378 KDM5DQ9BY66 1539 aa13.08□□□□□ -0.32
EPB41-208ENST00000460378 ABCA9Q8IUA7 1624 aa13.08□□□□□ -0.32
EPB41-208ENST00000460378 AFF2P51816 1311 aa13.07□□□□□ -0.32
EPB41-208ENST00000460378 DDB1Q16531 1140 aa13.07□□□□□ -0.32
EPB41-208ENST00000460378 APBA3O96018 575 aa13.06□□□□□ -0.32
EPB41-208ENST00000460378 TEFQ10587 303 aa13.06□□□□□ -0.32
EPB41-208ENST00000460378 L3MBTL2Q969R5 705 aa13.06□□□□□ -0.32
EPB41-208ENST00000460378 ARHGEF40Q8TER5 1519 aa13.06□□□□□ -0.32
EPB41-208ENST00000460378 SPG7Q9UQ90 795 aa13.06□□□□□ -0.32
EPB41-208ENST00000460378 CDCA7Q9BWT1 371 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms