RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 NOS1P29475 1434 aa14.41□□□□□ -0.1
HERC4-207ENST00000460168 PDIA4P13667 645 aaKnown RBP14.41□□□□□ -0.1
HERC4-207ENST00000460168 DDX10Q13206 875 aaKnown RBP14.41□□□□□ -0.1
HERC4-207ENST00000460168 STAC3Q96MF2 364 aa14.4□□□□□ -0.1
HERC4-207ENST00000460168 ESF1Q9H501 851 aaKnown RBP14.39□□□□□ -0.11
HERC4-207ENST00000460168 CLTCQ00610 1675 aaKnown RBP14.39□□□□□ -0.11
HERC4-207ENST00000460168 MROH2AA6NES4 1674 aa14.39□□□□□ -0.11
HERC4-207ENST00000460168 SYNMO15061 1565 aa14.39□□□□□ -0.11
HERC4-207ENST00000460168 PREX1Q8TCU6 1659 aa14.38□□□□□ -0.11
HERC4-207ENST00000460168 ADGRB3O60242 1522 aa14.38□□□□□ -0.11
HERC4-207ENST00000460168 MIER1Q8N108 512 aa14.37□□□□□ -0.11
HERC4-207ENST00000460168 MADDQ8WXG6 1647 aa14.37□□□□□ -0.11
HERC4-207ENST00000460168 PIK3C2BO00750 1634 aa14.37□□□□□ -0.11
HERC4-207ENST00000460168 NBPF1Q3BBV0 1214 aa14.36□□□□□ -0.11
HERC4-207ENST00000460168 SALL2Q9Y467 1007 aaPredicted RBP14.36□□□□□ -0.11
HERC4-207ENST00000460168 SLC52A1Q9NWF4 448 aa14.35□□□□□ -0.11
HERC4-207ENST00000460168 FBXO31Q5XUX0 539 aaPredicted RBP14.35□□□□□ -0.11
HERC4-207ENST00000460168 WASHC2AQ641Q2 1341 aa14.35□□□□□ -0.11
HERC4-207ENST00000460168 ERVK-7P63135 1459 aa14.34□□□□□ -0.11
HERC4-207ENST00000460168 IDI1Q13907 227 aa14.34□□□□□ -0.11
HERC4-207ENST00000460168 IFT172Q9UG01 1749 aa14.34□□□□□ -0.11
HERC4-207ENST00000460168 GPRASP1Q5JY77 1395 aa14.34□□□□□ -0.11
HERC4-207ENST00000460168 MYOM2P54296 1465 aa14.34□□□□□ -0.11
HERC4-207ENST00000460168 LAMC1P11047 1609 aa14.32□□□□□ -0.12
HERC4-207ENST00000460168 PDE4CQ08493 712 aa14.32□□□□□ -0.12
HERC4-207ENST00000460168 ST20-MTHFSA0A0A6YYL1 179 aa14.31□□□□□ -0.12
HERC4-207ENST00000460168 C11orf95C9JLR9 678 aaPredicted RBP14.31□□□□□ -0.12
HERC4-207ENST00000460168 POLR1AO95602 1720 aaPredicted RBP14.31□□□□□ -0.12
HERC4-207ENST00000460168 CCDC7Q96M83 1385 aa14.31□□□□□ -0.12
HERC4-207ENST00000460168 ADGRF5Q8IZF2 1346 aa14.31□□□□□ -0.12
HERC4-207ENST00000460168 ZMYM3Q14202 1370 aa14.3□□□□□ -0.12
HERC4-207ENST00000460168 PPLO60437 1756 aa14.3□□□□□ -0.12
HERC4-207ENST00000460168 RPGRIP1LQ68CZ1 1315 aa14.3□□□□□ -0.12
HERC4-207ENST00000460168 KIF7Q2M1P5 1343 aa14.29□□□□□ -0.12
HERC4-207ENST00000460168 SPATA31D1Q6ZQQ2 1576 aa14.29□□□□□ -0.12
HERC4-207ENST00000460168 STAG3Q9UJ98 1225 aa14.29□□□□□ -0.12
HERC4-207ENST00000460168 KIAA1210Q9ULL0 1709 aa14.28□□□□□ -0.12
HERC4-207ENST00000460168 NRXN1Q9ULB1 1477 aa14.28□□□□□ -0.12
HERC4-207ENST00000460168 POLR3GLQ9BT43 218 aa14.27□□□□□ -0.12
HERC4-207ENST00000460168 TMEM131LA2VDJ0 1609 aa14.27□□□□□ -0.12
HERC4-207ENST00000460168 MYO5BQ9ULV0 1848 aa14.27□□□□□ -0.13
HERC4-207ENST00000460168 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
HERC4-207ENST00000460168 CFAP70Q5T0N1 1121 aa14.26□□□□□ -0.13
HERC4-207ENST00000460168 NEXMIFQ5QGS0 1516 aa14.26□□□□□ -0.13
HERC4-207ENST00000460168 NUTM2DQ5VT03 806 aaPredicted RBP14.26□□□□□ -0.13
HERC4-207ENST00000460168 PIK3C2GO75747 1445 aa14.25□□□□□ -0.13
HERC4-207ENST00000460168 IQGAP1P46940 1657 aa14.24□□□□□ -0.13
HERC4-207ENST00000460168 SCAF11Q99590 1463 aaKnown RBP14.24□□□□□ -0.13
HERC4-207ENST00000460168 ANP32CO43423 234 aa14.24□□□□□ -0.13
HERC4-207ENST00000460168 FER1L4A9Z1Z3 1794 aa14.23□□□□□ -0.13
HERC4-207ENST00000460168 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
HERC4-207ENST00000460168 TNRQ92752 1358 aa14.21□□□□□ -0.13
HERC4-207ENST00000460168 HOMEZQ8IX15 550 aa14.21□□□□□ -0.13
HERC4-207ENST00000460168 CCDC136Q96JN2 1154 aa14.21□□□□□ -0.13
HERC4-207ENST00000460168 KCNA4P22459 653 aa14.21□□□□□ -0.14
HERC4-207ENST00000460168 C14orf93Q9H972 538 aaKnown RBP14.21□□□□□ -0.14
HERC4-207ENST00000460168 SETBP1Q9Y6X0 1596 aa14.2□□□□□ -0.14
HERC4-207ENST00000460168 ZFYVE9O95405 1425 aa14.2□□□□□ -0.14
HERC4-207ENST00000460168 A2ML1A8K2U0 1454 aa14.2□□□□□ -0.14
HERC4-207ENST00000460168 TESK2Q96S53 571 aa14.2□□□□□ -0.14
HERC4-207ENST00000460168 CEBPAP49715 358 aaPredicted RBP14.19□□□□□ -0.14
HERC4-207ENST00000460168 TMF1P82094 1093 aa14.19□□□□□ -0.14
HERC4-207ENST00000460168 C3P01024 1663 aa14.18□□□□□ -0.14
HERC4-207ENST00000460168 SENP3Q9H4L4 574 aaPredicted RBP14.18□□□□□ -0.14
HERC4-207ENST00000460168 DISP3Q9P2K9 1392 aa14.17□□□□□ -0.14
HERC4-207ENST00000460168 FGD1P98174 961 aa14.17□□□□□ -0.14
HERC4-207ENST00000460168 TMEM132EQ6IEE7 984 aa14.17□□□□□ -0.14
HERC4-207ENST00000460168 YTHDC1Q96MU7 727 aaKnown RBP14.17□□□□□ -0.14
HERC4-207ENST00000460168 TSHZ2Q9NRE2 1034 aa14.17□□□□□ -0.14
HERC4-207ENST00000460168 ADGRB1O14514 1584 aa14.16□□□□□ -0.14
HERC4-207ENST00000460168 RIMS2Q9UQ26 1411 aa14.16□□□□□ -0.14
HERC4-207ENST00000460168 TRAK1Q9UPV9 953 aa14.15□□□□□ -0.14
HERC4-207ENST00000460168 NLRP1Q9C000 1473 aa14.14□□□□□ -0.15
HERC4-207ENST00000460168 KDM5AP29375 1690 aaKnown RBP14.14□□□□□ -0.15
HERC4-207ENST00000460168 UBR1Q8IWV7 1749 aa14.13□□□□□ -0.15
HERC4-207ENST00000460168 HDGFP51858 240 aaKnown RBP14.13□□□□□ -0.15
HERC4-207ENST00000460168 CDCA8Q53HL2 280 aa14.13□□□□□ -0.15
HERC4-207ENST00000460168 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.13□□□□□ -0.15
HERC4-207ENST00000460168 MYO3AQ8NEV4 1616 aa14.12□□□□□ -0.15
HERC4-207ENST00000460168 CENPJQ9HC77 1338 aaPredicted RBP14.12□□□□□ -0.15
HERC4-207ENST00000460168 RIMS1Q86UR5 1692 aaKnown RBP14.12□□□□□ -0.15
HERC4-207ENST00000460168 CCER2I3L3R5 266 aa14.11□□□□□ -0.15
HERC4-207ENST00000460168 ALKQ9UM73 1620 aa14.1□□□□□ -0.15
HERC4-207ENST00000460168 TMEM2Q9UHN6 1383 aa14.1□□□□□ -0.15
HERC4-207ENST00000460168 SBNO2Q9Y2G9 1366 aa14.09□□□□□ -0.15
HERC4-207ENST00000460168 PRKRIP1Q9H875 184 aaPredicted RBP14.09□□□□□ -0.15
HERC4-207ENST00000460168 ASXL1Q8IXJ9 1541 aa14.09□□□□□ -0.15
HERC4-207ENST00000460168 TULP1O00294 542 aaPredicted RBP14.09□□□□□ -0.15
HERC4-207ENST00000460168 TAF7LQ5H9L4 462 aa14.09□□□□□ -0.15
HERC4-207ENST00000460168 STK26Q9P289 416 aa14.09□□□□□ -0.15
HERC4-207ENST00000460168 QRICH2Q9H0J4 1663 aa14.08□□□□□ -0.15
HERC4-207ENST00000460168 ARHGEF28Q8N1W1 1705 aaKnown RBP14.08□□□□□ -0.16
HERC4-207ENST00000460168 CNGB1Q14028 1251 aaPredicted RBP14.08□□□□□ -0.16
HERC4-207ENST00000460168 AMER1Q5JTC6 1135 aaPredicted RBP14.08□□□□□ -0.16
HERC4-207ENST00000460168 ADAMTSL3P82987 1691 aa14.08□□□□□ -0.16
HERC4-207ENST00000460168 BCANQ96GW7 911 aa14.07□□□□□ -0.16
HERC4-207ENST00000460168 YTHDC2Q9H6S0 1430 aaKnown RBP14.06□□□□□ -0.16
HERC4-207ENST00000460168 BCL11BQ9C0K0 894 aaPredicted RBP14.05□□□□□ -0.16
HERC4-207ENST00000460168 PANK3Q9H999 370 aa14.05□□□□□ -0.16
HERC4-207ENST00000460168 EID1Q9Y6B2 187 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms