RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 LRRC7Q96NW7 1537 aa26.34■■□□□ 1.81
SCARNA2-201ENST00000458748 ALKQ9UM73 1620 aa26.32■■□□□ 1.8
SCARNA2-201ENST00000458748 ZFYVE9O95405 1425 aa26.31■■□□□ 1.8
SCARNA2-201ENST00000458748 SPHKAPQ2M3C7 1700 aa26.31■■□□□ 1.8
SCARNA2-201ENST00000458748 RIMS2Q9UQ26 1411 aa26.29■■□□□ 1.8
SCARNA2-201ENST00000458748 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.28■■□□□ 1.8not detected■□□□□ 8.1
SCARNA2-201ENST00000458748 CHGAP10645 457 aaKnown RBP26.27■■□□□ 1.8
SCARNA2-201ENST00000458748 TRIM52Q96A61 297 aa26.27■■□□□ 1.8
SCARNA2-201ENST00000458748 PLEKHG1Q9ULL1 1385 aa26.26■■□□□ 1.79
SCARNA2-201ENST00000458748 ACIN1Q9UKV3 1341 aaKnown RBP26.24■■□□□ 1.79
SCARNA2-201ENST00000458748 PPP1R15AO75807 674 aaPredicted RBP26.24■■□□□ 1.79
SCARNA2-201ENST00000458748 SLC26A8Q96RN1 970 aa26.23■■□□□ 1.79
SCARNA2-201ENST00000458748 KCNA6P17658 529 aa26.22■■□□□ 1.79
SCARNA2-201ENST00000458748 BCANQ96GW7 911 aa26.22■■□□□ 1.79
SCARNA2-201ENST00000458748 SENP3Q9H4L4 574 aaPredicted RBP26.22■■□□□ 1.79
SCARNA2-201ENST00000458748 TRPM2O94759 1503 aa26.19■■□□□ 1.78
SCARNA2-201ENST00000458748 SOCS7O14512 581 aa26.19■■□□□ 1.78
SCARNA2-201ENST00000458748 XIRP1Q702N8 1843 aaKnown RBP26.18■■□□□ 1.78
SCARNA2-201ENST00000458748 NWD1Q149M9 1564 aa26.18■■□□□ 1.78
SCARNA2-201ENST00000458748 SLC4A1APQ9BWU0 796 aaKnown RBP26.17■■□□□ 1.78
SCARNA2-201ENST00000458748 TBX22Q9Y458 520 aa26.16■■□□□ 1.78
SCARNA2-201ENST00000458748 NKTRP30414 1462 aaKnown RBP26.16■■□□□ 1.78
SCARNA2-201ENST00000458748 CHD2O14647 1828 aaKnown RBP26.15■■□□□ 1.78
SCARNA2-201ENST00000458748 DIP2AQ14689 1571 aa26.15■■□□□ 1.78
SCARNA2-201ENST00000458748 MED1Q15648 1581 aaPredicted RBP26.15■■□□□ 1.78
SCARNA2-201ENST00000458748 CLTCL1P53675 1640 aa26.14■■□□□ 1.78
SCARNA2-201ENST00000458748 KIF1BO60333 1816 aa26.14■■□□□ 1.78
SCARNA2-201ENST00000458748 TMEM94Q12767 1356 aa26.12■■□□□ 1.77
SCARNA2-201ENST00000458748 PROSER2Q86WR7 435 aaPredicted RBP26.11■■□□□ 1.77
SCARNA2-201ENST00000458748 RBM33Q96EV2 1170 aaKnown RBP26.11■■□□□ 1.77
SCARNA2-201ENST00000458748 ADAMTS13Q76LX8 1427 aa26.1■■□□□ 1.77
SCARNA2-201ENST00000458748 PIK3R4Q99570 1358 aa26.09■■□□□ 1.77
SCARNA2-201ENST00000458748 ZNF326Q5BKZ1 582 aaKnown RBP26.09■■□□□ 1.77
SCARNA2-201ENST00000458748 NUTM2DQ5VT03 806 aaPredicted RBP26.09■■□□□ 1.77
SCARNA2-201ENST00000458748 SETD5Q9C0A6 1442 aa26.07■■□□□ 1.76
SCARNA2-201ENST00000458748 SETBP1Q9Y6X0 1596 aa26.05■■□□□ 1.76
SCARNA2-201ENST00000458748 NEXMIFQ5QGS0 1516 aa26.04■■□□□ 1.76
SCARNA2-201ENST00000458748 NCOA3Q9Y6Q9 1424 aa26.02■■□□□ 1.76
SCARNA2-201ENST00000458748 NRXN3Q9Y4C0 1643 aa26.01■■□□□ 1.75
SCARNA2-201ENST00000458748 MPHOSPH9Q99550 1183 aa26■■□□□ 1.75
SCARNA2-201ENST00000458748 FAM135BQ49AJ0 1406 aa25.99■■□□□ 1.75
SCARNA2-201ENST00000458748 MSH6P52701 1360 aa25.99■■□□□ 1.75
SCARNA2-201ENST00000458748 RPGRIP1LQ68CZ1 1315 aa25.99■■□□□ 1.75
SCARNA2-201ENST00000458748 PHF23Q9BUL5 403 aaPredicted RBP25.99■■□□□ 1.75
SCARNA2-201ENST00000458748 VGFO15240 615 aaPredicted RBP25.96■■□□□ 1.75
SCARNA2-201ENST00000458748 FOXD1Q16676 465 aa25.94■■□□□ 1.74
SCARNA2-201ENST00000458748 AMOTL2Q9Y2J4 779 aa25.94■■□□□ 1.74
SCARNA2-201ENST00000458748 CCDC144AA2RUR9 1427 aa25.94■■□□□ 1.74
SCARNA2-201ENST00000458748 RAB3GAP2Q9H2M9 1393 aa25.94■■□□□ 1.74
SCARNA2-201ENST00000458748 PPLO60437 1756 aa25.92■■□□□ 1.74
SCARNA2-201ENST00000458748 XRN1Q8IZH2 1706 aaKnown RBP25.92■■□□□ 1.74
SCARNA2-201ENST00000458748 PTPRUQ92729 1446 aa25.92■■□□□ 1.74
SCARNA2-201ENST00000458748 ROBO1Q9Y6N7 1651 aa25.92■■□□□ 1.74
SCARNA2-201ENST00000458748 METP08581 1390 aa25.89■■□□□ 1.74
SCARNA2-201ENST00000458748 HRCP23327 699 aa25.88■■□□□ 1.73
SCARNA2-201ENST00000458748 C14orf37Q86TY3 774 aa25.88■■□□□ 1.73
SCARNA2-201ENST00000458748 C19orf44Q9H6X5 657 aa25.88■■□□□ 1.73
SCARNA2-201ENST00000458748 SLAIN2Q9P270 581 aa25.88■■□□□ 1.73
SCARNA2-201ENST00000458748 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.86■■□□□ 1.73
SCARNA2-201ENST00000458748 CADPS2Q86UW7 1296 aa25.85■■□□□ 1.73
SCARNA2-201ENST00000458748 SPATA31E1Q6ZUB1 1445 aa25.85■■□□□ 1.73
SCARNA2-201ENST00000458748 SETD1AO15047 1707 aaKnown RBP25.84■■□□□ 1.73
SCARNA2-201ENST00000458748 ATF3P18847 181 aa25.82■■□□□ 1.72
SCARNA2-201ENST00000458748 DCCP43146 1447 aa25.81■■□□□ 1.72
SCARNA2-201ENST00000458748 IFT172Q9UG01 1749 aa25.81■■□□□ 1.72
SCARNA2-201ENST00000458748 ANKRD30BQ9BXX2 1392 aa25.81■■□□□ 1.72
SCARNA2-201ENST00000458748 RGS17Q9UGC6 210 aaPredicted RBP25.8■■□□□ 1.72
SCARNA2-201ENST00000458748 RGL3Q3MIN7 710 aa25.78■■□□□ 1.72
SCARNA2-201ENST00000458748 PRAG1Q86YV5 1406 aa25.77■■□□□ 1.72
SCARNA2-201ENST00000458748 PHLPP1O60346 1717 aa25.76■■□□□ 1.71
SCARNA2-201ENST00000458748 PTCH1Q13635 1447 aa25.75■■□□□ 1.71
SCARNA2-201ENST00000458748 ADGRF5Q8IZF2 1346 aa25.73■■□□□ 1.71
SCARNA2-201ENST00000458748 ADGRL3Q9HAR2 1447 aa25.72■■□□□ 1.71
SCARNA2-201ENST00000458748 JCADQ9P266 1359 aa25.7■■□□□ 1.71
SCARNA2-201ENST00000458748 NALCNQ8IZF0 1738 aa25.7■■□□□ 1.7
SCARNA2-201ENST00000458748 COL16A1Q07092 1604 aaPredicted RBP25.69■■□□□ 1.7
SCARNA2-201ENST00000458748 PIK3C2GO75747 1445 aa25.68■■□□□ 1.7
SCARNA2-201ENST00000458748 ROBO2Q9HCK4 1378 aa25.68■■□□□ 1.7
SCARNA2-201ENST00000458748 AHDC1Q5TGY3 1603 aaPredicted RBP25.67■■□□□ 1.7
SCARNA2-201ENST00000458748 MST1RQ04912 1400 aa25.66■■□□□ 1.7
SCARNA2-201ENST00000458748 POTEAQ6S8J7 498 aa25.66■■□□□ 1.7
SCARNA2-201ENST00000458748 MYOM2P54296 1465 aa25.65■■□□□ 1.7
SCARNA2-201ENST00000458748 BRINP3Q76B58 766 aa25.64■■□□□ 1.7
SCARNA2-201ENST00000458748 NRXN1Q9ULB1 1477 aa25.63■■□□□ 1.69
SCARNA2-201ENST00000458748 LAMC1P11047 1609 aa25.62■■□□□ 1.69
SCARNA2-201ENST00000458748 TECPR2O15040 1411 aa25.62■■□□□ 1.69
SCARNA2-201ENST00000458748 LRPPRCP42704 1394 aaKnown RBP25.61■■□□□ 1.69
SCARNA2-201ENST00000458748 ASXL1Q8IXJ9 1541 aa25.61■■□□□ 1.69
SCARNA2-201ENST00000458748 KNDC1Q76NI1 1749 aa25.6■■□□□ 1.69
SCARNA2-201ENST00000458748 ABCC11Q96J66 1382 aa25.59■■□□□ 1.69
SCARNA2-201ENST00000458748 C14orf93Q9H972 538 aaKnown RBP25.59■■□□□ 1.69
SCARNA2-201ENST00000458748 STAC3Q96MF2 364 aa25.58■■□□□ 1.69
SCARNA2-201ENST00000458748 LRP6O75581 1613 aa25.57■■□□□ 1.68
SCARNA2-201ENST00000458748 NHSL1Q5SYE7 1610 aa25.57■■□□□ 1.68
SCARNA2-201ENST00000458748 SPATA31A6Q5VVP1 1343 aa25.57■■□□□ 1.68
SCARNA2-201ENST00000458748 C1orf167Q5SNV9 1468 aa25.55■■□□□ 1.68
SCARNA2-201ENST00000458748 TMEM132EQ6IEE7 984 aa25.55■■□□□ 1.68
SCARNA2-201ENST00000458748 STK26Q9P289 416 aa25.55■■□□□ 1.68
SCARNA2-201ENST00000458748 SHPRHQ149N8 1683 aa25.55■■□□□ 1.68
SCARNA2-201ENST00000458748 YTHDC2Q9H6S0 1430 aaKnown RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms