RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 GOLGA6L6A8MZA4 724 aa13.39□□□□□ -0.27
AMBRA1-202ENST00000458649 GOLGA6L4A6NEF3 574 aa13.39□□□□□ -0.27
AMBRA1-202ENST00000458649 PODXL2Q9NZ53 605 aa13.39□□□□□ -0.27
AMBRA1-202ENST00000458649 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
AMBRA1-202ENST00000458649 HSP90AB1P08238 724 aaKnown RBP13.38□□□□□ -0.27
AMBRA1-202ENST00000458649 ANKLE2Q86XL3 938 aa13.38□□□□□ -0.27
AMBRA1-202ENST00000458649 CDK13Q14004 1512 aaKnown RBP13.38□□□□□ -0.27
AMBRA1-202ENST00000458649 DAPK1P53355 1430 aa13.38□□□□□ -0.27
AMBRA1-202ENST00000458649 GNL2Q13823 731 aaKnown RBP13.38□□□□□ -0.27
AMBRA1-202ENST00000458649 NRDCO43847 1150 aa13.38□□□□□ -0.27
AMBRA1-202ENST00000458649 NEXNQ0ZGT2 675 aa13.38□□□□□ -0.27
AMBRA1-202ENST00000458649 ITPRIPQ8IWB1 547 aa13.38□□□□□ -0.27
AMBRA1-202ENST00000458649 SMC4Q9NTJ3 1288 aa13.37□□□□□ -0.27
AMBRA1-202ENST00000458649 SF3B2Q13435 895 aaKnown RBP13.37□□□□□ -0.27
AMBRA1-202ENST00000458649 KIAA1107Q9UPP5 1409 aa13.37□□□□□ -0.27
AMBRA1-202ENST00000458649 SLC52A1Q9NWF4 448 aa13.37□□□□□ -0.27
AMBRA1-202ENST00000458649 CNTLNQ9NXG0 1405 aa13.37□□□□□ -0.27
AMBRA1-202ENST00000458649 NAIPQ13075 1403 aa13.36□□□□□ -0.27
AMBRA1-202ENST00000458649 PLCB2Q00722 1185 aa13.36□□□□□ -0.27
AMBRA1-202ENST00000458649 NGEFQ8N5V2 710 aa13.35□□□□□ -0.27
AMBRA1-202ENST00000458649 PTMSP20962 102 aa13.35□□□□□ -0.27
AMBRA1-202ENST00000458649 ARID3AQ99856 593 aa13.35□□□□□ -0.27
AMBRA1-202ENST00000458649 LRRFIP1Q32MZ4 808 aaKnown RBP13.35□□□□□ -0.27
AMBRA1-202ENST00000458649 TAOK2Q9UL54 1235 aa13.35□□□□□ -0.27
AMBRA1-202ENST00000458649 TCERG1O14776 1098 aaKnown RBP13.34□□□□□ -0.27
AMBRA1-202ENST00000458649 PMFBP1Q8TBY8 1022 aa13.34□□□□□ -0.27
AMBRA1-202ENST00000458649 GRIN2AQ12879 1464 aa13.34□□□□□ -0.27
AMBRA1-202ENST00000458649 ROCK1Q13464 1354 aa13.34□□□□□ -0.27
AMBRA1-202ENST00000458649 DDX58O95786 925 aaKnown RBP13.34□□□□□ -0.27
AMBRA1-202ENST00000458649 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.27
AMBRA1-202ENST00000458649 HSCBQ8IWL3 235 aa13.33□□□□□ -0.27
AMBRA1-202ENST00000458649 SYTL4Q96C24 671 aaPredicted RBP13.33□□□□□ -0.28
AMBRA1-202ENST00000458649 NOL10Q9BSC4 688 aaKnown RBP13.33□□□□□ -0.28
AMBRA1-202ENST00000458649 SLC4A10Q6U841 1118 aa13.33□□□□□ -0.28
AMBRA1-202ENST00000458649 HTATSF1O43719 755 aaKnown RBP13.32□□□□□ -0.28
AMBRA1-202ENST00000458649 NBPF8Q3BBV2 869 aa13.32□□□□□ -0.28
AMBRA1-202ENST00000458649 CCDC34Q96HJ3 373 aa13.32□□□□□ -0.28
AMBRA1-202ENST00000458649 DIAPH1O60610 1272 aaKnown RBP13.32□□□□□ -0.28
AMBRA1-202ENST00000458649 CLSTN1O94985 981 aa13.31□□□□□ -0.28
AMBRA1-202ENST00000458649 A0A0U1RQG5 324 aaPredicted RBP13.31□□□□□ -0.28
AMBRA1-202ENST00000458649 HSP90B1P14625 803 aaKnown RBP13.31□□□□□ -0.28
AMBRA1-202ENST00000458649 APBB1O00213 710 aa13.31□□□□□ -0.28
AMBRA1-202ENST00000458649 AMOTL1Q8IY63 956 aa13.31□□□□□ -0.28
AMBRA1-202ENST00000458649 CHMP4CQ96CF2 233 aa13.3□□□□□ -0.28
AMBRA1-202ENST00000458649 NLRP2Q9NX02 1062 aa13.3□□□□□ -0.28
AMBRA1-202ENST00000458649 DMRT2Q9Y5R5 561 aa13.3□□□□□ -0.28
AMBRA1-202ENST00000458649 PLB1Q6P1J6 1458 aa13.3□□□□□ -0.28
AMBRA1-202ENST00000458649 SCAPERQ9BY12 1400 aa13.29□□□□□ -0.28
AMBRA1-202ENST00000458649 ANO8Q9HCE9 1232 aaPredicted RBP13.29□□□□□ -0.28
AMBRA1-202ENST00000458649 RRP7AQ9Y3A4 280 aaKnown RBP13.29□□□□□ -0.28
AMBRA1-202ENST00000458649 KIAA2012Q0VF49 1180 aa13.29□□□□□ -0.28
AMBRA1-202ENST00000458649 E9PSI1 815 aa13.28□□□□□ -0.28
AMBRA1-202ENST00000458649 ZNF608Q9ULD9 1512 aaPredicted RBP13.28□□□□□ -0.28
AMBRA1-202ENST00000458649 USP35Q9P2H5 1018 aa13.28□□□□□ -0.28
AMBRA1-202ENST00000458649 APAF1O14727 1248 aa13.28□□□□□ -0.28
AMBRA1-202ENST00000458649 NLRP6P59044 892 aa13.28□□□□□ -0.28
AMBRA1-202ENST00000458649 ESCO1Q5FWF5 840 aa13.28□□□□□ -0.28
AMBRA1-202ENST00000458649 CLUAP1Q96AJ1 413 aa13.28□□□□□ -0.28
AMBRA1-202ENST00000458649 SMG6Q86US8 1419 aaKnown RBP13.27□□□□□ -0.28
AMBRA1-202ENST00000458649 NBPF1Q3BBV0 1214 aa13.27□□□□□ -0.28
AMBRA1-202ENST00000458649 CFAP70Q5T0N1 1121 aa13.27□□□□□ -0.28
AMBRA1-202ENST00000458649 TRIM34Q9BYJ4 488 aa13.27□□□□□ -0.28
AMBRA1-202ENST00000458649 RPGRIP1LQ68CZ1 1315 aa13.27□□□□□ -0.29
AMBRA1-202ENST00000458649 WWC1Q8IX03 1113 aa13.26□□□□□ -0.29
AMBRA1-202ENST00000458649 PTPN23Q9H3S7 1636 aa13.26□□□□□ -0.29
AMBRA1-202ENST00000458649 RRP1P56182 461 aaKnown RBP13.26□□□□□ -0.29
AMBRA1-202ENST00000458649 KIF3AQ9Y496 699 aa13.26□□□□□ -0.29
AMBRA1-202ENST00000458649 ARHGEF11O15085 1522 aa13.26□□□□□ -0.29
AMBRA1-202ENST00000458649 CD109Q6YHK3 1445 aa13.25□□□□□ -0.29
AMBRA1-202ENST00000458649 BRD4O60885 1362 aaPredicted RBP13.25□□□□□ -0.29
AMBRA1-202ENST00000458649 ABCC5O15440 1437 aa13.25□□□□□ -0.29
AMBRA1-202ENST00000458649 WDR97A6NE52 1622 aa13.25□□□□□ -0.29
AMBRA1-202ENST00000458649 TMEM132EQ6IEE7 984 aa13.25□□□□□ -0.29
AMBRA1-202ENST00000458649 GOLGA6L3A6NEY3 463 aa13.25□□□□□ -0.29
AMBRA1-202ENST00000458649 TRIM6-TRIM34B2RNG4 842 aa13.24□□□□□ -0.29
AMBRA1-202ENST00000458649 CALRP27797 417 aaKnown RBP13.24□□□□□ -0.29
AMBRA1-202ENST00000458649 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
AMBRA1-202ENST00000458649 CAMSAP2Q08AD1 1489 aa13.24□□□□□ -0.29
AMBRA1-202ENST00000458649 ABTB2Q8N961 1025 aa13.23□□□□□ -0.29
AMBRA1-202ENST00000458649 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
AMBRA1-202ENST00000458649 IPO9Q96P70 1041 aaKnown RBP13.23□□□□□ -0.29
AMBRA1-202ENST00000458649 C9orf78Q9NZ63 289 aaPredicted RBP13.23□□□□□ -0.29
AMBRA1-202ENST00000458649 PLIN1O60240 522 aa13.22□□□□□ -0.29
AMBRA1-202ENST00000458649 RBM33Q96EV2 1170 aaKnown RBP13.22□□□□□ -0.29
AMBRA1-202ENST00000458649 CTDP1Q9Y5B0 961 aaPredicted RBP13.22□□□□□ -0.29
AMBRA1-202ENST00000458649 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
AMBRA1-202ENST00000458649 TOMM22Q9NS69 142 aa13.22□□□□□ -0.29
AMBRA1-202ENST00000458649 RAPGEF3O95398 923 aa13.22□□□□□ -0.29
AMBRA1-202ENST00000458649 VPS37DQ86XT2 251 aa13.22□□□□□ -0.29
AMBRA1-202ENST00000458649 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
AMBRA1-202ENST00000458649 EXOC6Q8TAG9 804 aa13.21□□□□□ -0.29
AMBRA1-202ENST00000458649 PLEKHO1Q53GL0 409 aaPredicted RBP13.21□□□□□ -0.29
AMBRA1-202ENST00000458649 ANKRD30BQ9BXX2 1392 aa13.21□□□□□ -0.29
AMBRA1-202ENST00000458649 TPRNQ4KMQ1 711 aa13.21□□□□□ -0.3
AMBRA1-202ENST00000458649 API5Q9BZZ5 524 aaKnown RBP13.21□□□□□ -0.3
AMBRA1-202ENST00000458649 AKNAQ7Z591 1439 aa13.21□□□□□ -0.3
AMBRA1-202ENST00000458649 GAS2L2Q8NHY3 880 aa13.2□□□□□ -0.3
AMBRA1-202ENST00000458649 GNAI1P63096 354 aa13.2□□□□□ -0.3
AMBRA1-202ENST00000458649 TATP17735 454 aaPredicted RBP13.19□□□□□ -0.3
AMBRA1-202ENST00000458649 EIF2S2P20042 333 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms