RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 ABCC1P33527 1531 aa18.58■□□□□ 0.57
SCFD1-203ENST00000458591 ZNF521Q96K83 1311 aa18.58■□□□□ 0.57
SCFD1-203ENST00000458591 KIF3BO15066 747 aa18.58■□□□□ 0.56
SCFD1-203ENST00000458591 GOLGA2Q08379 1002 aa18.58■□□□□ 0.56
SCFD1-203ENST00000458591 RTL5Q5HYW3 569 aaPredicted RBP18.58■□□□□ 0.56
SCFD1-203ENST00000458591 APAF1O14727 1248 aa18.57■□□□□ 0.56
SCFD1-203ENST00000458591 ZCCHC11Q5TAX3 1644 aaKnown RBP18.57■□□□□ 0.56
SCFD1-203ENST00000458591 ADGRF5Q8IZF2 1346 aa18.57■□□□□ 0.56
SCFD1-203ENST00000458591 INSRP06213 1382 aa18.56■□□□□ 0.56
SCFD1-203ENST00000458591 SCAF11Q99590 1463 aaKnown RBP18.56■□□□□ 0.56
SCFD1-203ENST00000458591 KDM2BQ8NHM5 1336 aa18.56■□□□□ 0.56
SCFD1-203ENST00000458591 CARD14Q9BXL6 1004 aa18.56■□□□□ 0.56
SCFD1-203ENST00000458591 CLTCL1P53675 1640 aa18.55■□□□□ 0.56
SCFD1-203ENST00000458591 BCAR3O75815 825 aa18.55■□□□□ 0.56
SCFD1-203ENST00000458591 UGGT1Q9NYU2 1555 aa18.55■□□□□ 0.56
SCFD1-203ENST00000458591 SLFN5Q08AF3 891 aa18.55■□□□□ 0.56
SCFD1-203ENST00000458591 IQGAP1P46940 1657 aa18.54■□□□□ 0.56
SCFD1-203ENST00000458591 NEFMP07197 916 aa18.53■□□□□ 0.56
SCFD1-203ENST00000458591 PTPRTO14522 1441 aa18.52■□□□□ 0.56
SCFD1-203ENST00000458591 TRPM2O94759 1503 aa18.52■□□□□ 0.56
SCFD1-203ENST00000458591 ASXL1Q8IXJ9 1541 aa18.52■□□□□ 0.56
SCFD1-203ENST00000458591 RGS3P49796 1198 aa18.52■□□□□ 0.55
SCFD1-203ENST00000458591 CDCA8Q53HL2 280 aa18.52■□□□□ 0.55
SCFD1-203ENST00000458591 TNNT2P45379 298 aaPredicted RBP18.5■□□□□ 0.55
SCFD1-203ENST00000458591 SCAPERQ9BY12 1400 aa18.5■□□□□ 0.55
SCFD1-203ENST00000458591 ZFYVE16Q7Z3T8 1539 aa18.5■□□□□ 0.55
SCFD1-203ENST00000458591 CHGAP10645 457 aaKnown RBP18.48■□□□□ 0.55
SCFD1-203ENST00000458591 SPHKAPQ2M3C7 1700 aa18.47■□□□□ 0.55
SCFD1-203ENST00000458591 SYNMO15061 1565 aa18.47■□□□□ 0.55
SCFD1-203ENST00000458591 CENPQQ7L2Z9 268 aaPredicted RBP18.47■□□□□ 0.55
SCFD1-203ENST00000458591 TRMT2AQ8IZ69 625 aaKnown RBP18.47■□□□□ 0.55
SCFD1-203ENST00000458591 MYOM1P52179 1685 aa18.47■□□□□ 0.55
SCFD1-203ENST00000458591 NEUROD2Q15784 382 aa18.47■□□□□ 0.55
SCFD1-203ENST00000458591 PIK3C2GO75747 1445 aa18.46■□□□□ 0.55
SCFD1-203ENST00000458591 C8orf34Q49A92 452 aa18.46■□□□□ 0.55
SCFD1-203ENST00000458591 ERVK-7P63135 1459 aa18.46■□□□□ 0.55
SCFD1-203ENST00000458591 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
SCFD1-203ENST00000458591 RRP7AQ9Y3A4 280 aaKnown RBP18.45■□□□□ 0.54
SCFD1-203ENST00000458591 RTEL1-TNFRSF6BF6WH68 1400 aa18.45■□□□□ 0.54
SCFD1-203ENST00000458591 CEP152O94986 1710 aa18.45■□□□□ 0.54
SCFD1-203ENST00000458591 KANK1Q14678 1352 aa18.44■□□□□ 0.54
SCFD1-203ENST00000458591 TRAK1Q9UPV9 953 aa18.44■□□□□ 0.54
SCFD1-203ENST00000458591 IGHDP01880 384 aa18.44■□□□□ 0.54
SCFD1-203ENST00000458591 EIF3AQ14152 1382 aaKnown RBP18.43■□□□□ 0.54
SCFD1-203ENST00000458591 TMEM132EQ6IEE7 984 aa18.42■□□□□ 0.54
SCFD1-203ENST00000458591 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.42■□□□□ 0.54
SCFD1-203ENST00000458591 UHRF1BP1LA0JNW5 1464 aa18.42■□□□□ 0.54
SCFD1-203ENST00000458591 FANCAO15360 1455 aa18.42■□□□□ 0.54
SCFD1-203ENST00000458591 SLC12A5Q9H2X9 1139 aa18.42■□□□□ 0.54
SCFD1-203ENST00000458591 NUTM2DQ5VT03 806 aaPredicted RBP18.41■□□□□ 0.54
SCFD1-203ENST00000458591 PANK1Q8TE04 598 aa18.41■□□□□ 0.54
SCFD1-203ENST00000458591 ATP7AQ04656 1500 aa18.41■□□□□ 0.54
SCFD1-203ENST00000458591 FAM161AQ3B820 660 aa18.4■□□□□ 0.54
SCFD1-203ENST00000458591 TNNQ9UQP3 1299 aa18.4■□□□□ 0.54
SCFD1-203ENST00000458591 NPC1L1Q9UHC9 1359 aa18.39■□□□□ 0.54
SCFD1-203ENST00000458591 NKTRP30414 1462 aaKnown RBP18.39■□□□□ 0.53
SCFD1-203ENST00000458591 TET3O43151 1660 aa18.39■□□□□ 0.53
SCFD1-203ENST00000458591 COG6Q9Y2V7 657 aa18.39■□□□□ 0.53
SCFD1-203ENST00000458591 ABCA6Q8N139 1617 aa18.39■□□□□ 0.53
SCFD1-203ENST00000458591 CLASP1Q7Z460 1538 aa18.38■□□□□ 0.53
SCFD1-203ENST00000458591 DEPDC5O75140 1603 aa18.38■□□□□ 0.53
SCFD1-203ENST00000458591 E9PSI1 815 aa18.38■□□□□ 0.53
SCFD1-203ENST00000458591 IL27Q8NEV9 243 aa18.38■□□□□ 0.53
SCFD1-203ENST00000458591 STAC3Q96MF2 364 aa18.38■□□□□ 0.53
SCFD1-203ENST00000458591 WWC1Q8IX03 1113 aa18.38■□□□□ 0.53
SCFD1-203ENST00000458591 NOS1P29475 1434 aa18.37■□□□□ 0.53
SCFD1-203ENST00000458591 KDM5AP29375 1690 aaKnown RBP18.37■□□□□ 0.53
SCFD1-203ENST00000458591 ADGRL1O94910 1474 aa18.37■□□□□ 0.53
SCFD1-203ENST00000458591 FRAT1Q92837 279 aaPredicted RBP18.37■□□□□ 0.53
SCFD1-203ENST00000458591 DDRGK1Q96HY6 314 aa18.37■□□□□ 0.53
SCFD1-203ENST00000458591 VWDEQ8N2E2 1590 aa18.36■□□□□ 0.53
SCFD1-203ENST00000458591 MORC1Q86VD1 984 aa18.36■□□□□ 0.53
SCFD1-203ENST00000458591 MROH1Q8NDA8 1641 aa18.36■□□□□ 0.53
SCFD1-203ENST00000458591 GGT6Q6P531 493 aa18.35■□□□□ 0.53
SCFD1-203ENST00000458591 BCL2L13Q9BXK5 485 aa18.35■□□□□ 0.53
SCFD1-203ENST00000458591 USP35Q9P2H5 1018 aa18.35■□□□□ 0.53
SCFD1-203ENST00000458591 MAP3K4Q9Y6R4 1608 aa18.35■□□□□ 0.53
SCFD1-203ENST00000458591 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
SCFD1-203ENST00000458591 CENPJQ9HC77 1338 aaPredicted RBP18.35■□□□□ 0.53
SCFD1-203ENST00000458591 NSD3Q9BZ95 1437 aa18.34■□□□□ 0.53
SCFD1-203ENST00000458591 RTN4Q9NQC3 1192 aaKnown RBP18.34■□□□□ 0.53
SCFD1-203ENST00000458591 INO80Q9ULG1 1556 aaPredicted RBP18.34■□□□□ 0.53
SCFD1-203ENST00000458591 NFKBIBQ15653 356 aa18.34■□□□□ 0.53
SCFD1-203ENST00000458591 SEC24BO95487 1268 aa18.33■□□□□ 0.53
SCFD1-203ENST00000458591 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.53
SCFD1-203ENST00000458591 MROH2AA6NES4 1674 aa18.32■□□□□ 0.52
SCFD1-203ENST00000458591 TCP11L2Q8N4U5 519 aa18.31■□□□□ 0.52
SCFD1-203ENST00000458591 MYOM2P54296 1465 aa18.31■□□□□ 0.52
SCFD1-203ENST00000458591 SAFB2Q14151 953 aaKnown RBP eCLIP18.3■□□□□ 0.52
SCFD1-203ENST00000458591 DAXXQ9UER7 740 aaPredicted RBP18.3■□□□□ 0.52
SCFD1-203ENST00000458591 RLBP1P12271 317 aa18.3■□□□□ 0.52
SCFD1-203ENST00000458591 MTHFSP49914 203 aa18.3■□□□□ 0.52
SCFD1-203ENST00000458591 ABCA9Q8IUA7 1624 aa18.29■□□□□ 0.52
SCFD1-203ENST00000458591 CLUAP1Q96AJ1 413 aa18.29■□□□□ 0.52
SCFD1-203ENST00000458591 POLR3AO14802 1390 aaPredicted RBP18.29■□□□□ 0.52
SCFD1-203ENST00000458591 ARAP3Q8WWN8 1544 aa18.29■□□□□ 0.52
SCFD1-203ENST00000458591 PPRC1Q5VV67 1664 aaKnown RBP18.28■□□□□ 0.52
SCFD1-203ENST00000458591 CFAP65Q6ZU64 1925 aaKnown RBP18.28■□□□□ 0.52
SCFD1-203ENST00000458591 KIAA1210Q9ULL0 1709 aa18.27■□□□□ 0.52
SCFD1-203ENST00000458591 C14orf93Q9H972 538 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms