RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ROBO1Q9Y6N7 1651 aa16.21■□□□□ 0.19
HDLBP-227ENST00000458564 PROSER2Q86WR7 435 aaPredicted RBP16.21■□□□□ 0.19
HDLBP-227ENST00000458564 RGS17Q9UGC6 210 aaPredicted RBP16.21■□□□□ 0.19
HDLBP-227ENST00000458564 UNC13BO14795 1591 aa16.21■□□□□ 0.18
HDLBP-227ENST00000458564 FAM50AQ14320 339 aaKnown RBP16.2■□□□□ 0.18
HDLBP-227ENST00000458564 TMEM131LA2VDJ0 1609 aa16.19■□□□□ 0.18
HDLBP-227ENST00000458564 GCC2Q8IWJ2 1684 aa16.19■□□□□ 0.18
HDLBP-227ENST00000458564 MSH6P52701 1360 aa16.19■□□□□ 0.18
HDLBP-227ENST00000458564 RIMS2Q9UQ26 1411 aa16.19■□□□□ 0.18
HDLBP-227ENST00000458564 ROCK1Q13464 1354 aa16.17■□□□□ 0.18
HDLBP-227ENST00000458564 HDGFP51858 240 aaKnown RBP16.16■□□□□ 0.18
HDLBP-227ENST00000458564 CHD2O14647 1828 aaKnown RBP16.16■□□□□ 0.18
HDLBP-227ENST00000458564 NCOA3Q9Y6Q9 1424 aa16.16■□□□□ 0.18
HDLBP-227ENST00000458564 MYO5BQ9ULV0 1848 aa16.15■□□□□ 0.18
HDLBP-227ENST00000458564 RBM33Q96EV2 1170 aaKnown RBP16.15■□□□□ 0.18
HDLBP-227ENST00000458564 DIP2AQ14689 1571 aa16.14■□□□□ 0.17
HDLBP-227ENST00000458564 TBX22Q9Y458 520 aa16.14■□□□□ 0.17
HDLBP-227ENST00000458564 IQGAP3Q86VI3 1631 aa16.14■□□□□ 0.17
HDLBP-227ENST00000458564 E9PCH4 1651 aa16.14■□□□□ 0.17
HDLBP-227ENST00000458564 ADAMTS13Q76LX8 1427 aa16.13■□□□□ 0.17
HDLBP-227ENST00000458564 PPP1R15AO75807 674 aaPredicted RBP16.13■□□□□ 0.17
HDLBP-227ENST00000458564 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.13■□□□□ 0.17
HDLBP-227ENST00000458564 BCANQ96GW7 911 aa16.13■□□□□ 0.17
HDLBP-227ENST00000458564 SLAIN2Q9P270 581 aa16.13■□□□□ 0.17
HDLBP-227ENST00000458564 PIK3R4Q99570 1358 aa16.13■□□□□ 0.17
HDLBP-227ENST00000458564 JCADQ9P266 1359 aa16.11■□□□□ 0.17
HDLBP-227ENST00000458564 COL16A1Q07092 1604 aaPredicted RBP16.09■□□□□ 0.17
HDLBP-227ENST00000458564 PHLPP1O60346 1717 aa16.09■□□□□ 0.17
HDLBP-227ENST00000458564 POTEAQ6S8J7 498 aa16.09■□□□□ 0.17
HDLBP-227ENST00000458564 AHDC1Q5TGY3 1603 aaPredicted RBP16.06■□□□□ 0.16
HDLBP-227ENST00000458564 TRPM2O94759 1503 aa16.06■□□□□ 0.16
HDLBP-227ENST00000458564 NUP155O75694 1391 aa16.06■□□□□ 0.16
HDLBP-227ENST00000458564 CHGAP10645 457 aaKnown RBP16.05■□□□□ 0.16
HDLBP-227ENST00000458564 CADPS2Q86UW7 1296 aa16.05■□□□□ 0.16
HDLBP-227ENST00000458564 C19orf44Q9H6X5 657 aa16.05■□□□□ 0.16
HDLBP-227ENST00000458564 DCCP43146 1447 aa16.04■□□□□ 0.16
HDLBP-227ENST00000458564 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-227ENST00000458564 SPATA31A6Q5VVP1 1343 aa16.03■□□□□ 0.16
HDLBP-227ENST00000458564 SETBP1Q9Y6X0 1596 aa16.03■□□□□ 0.16
HDLBP-227ENST00000458564 PTPRUQ92729 1446 aa16.02■□□□□ 0.16
HDLBP-227ENST00000458564 NUTM2DQ5VT03 806 aaPredicted RBP16.02■□□□□ 0.16
HDLBP-227ENST00000458564 LRP6O75581 1613 aa16.01■□□□□ 0.15
HDLBP-227ENST00000458564 NRXN3Q9Y4C0 1643 aa16.01■□□□□ 0.15
HDLBP-227ENST00000458564 ATF3P18847 181 aa16.01■□□□□ 0.15
HDLBP-227ENST00000458564 C14orf37Q86TY3 774 aa16.01■□□□□ 0.15
HDLBP-227ENST00000458564 XRN1Q8IZH2 1706 aaKnown RBP16.01■□□□□ 0.15
HDLBP-227ENST00000458564 SHPRHQ149N8 1683 aa16■□□□□ 0.15
HDLBP-227ENST00000458564 AMOTL2Q9Y2J4 779 aa16■□□□□ 0.15
HDLBP-227ENST00000458564 SPHKAPQ2M3C7 1700 aa15.99■□□□□ 0.15
HDLBP-227ENST00000458564 BRINP3Q76B58 766 aa15.97■□□□□ 0.15
HDLBP-227ENST00000458564 ASXL1Q8IXJ9 1541 aa15.96■□□□□ 0.15
HDLBP-227ENST00000458564 SETD1AO15047 1707 aaKnown RBP15.95■□□□□ 0.14
HDLBP-227ENST00000458564 MST1RQ04912 1400 aa15.94■□□□□ 0.14
HDLBP-227ENST00000458564 SETD5Q9C0A6 1442 aa15.94■□□□□ 0.14
HDLBP-227ENST00000458564 ITGAEP38570 1179 aa15.94■□□□□ 0.14
HDLBP-227ENST00000458564 ZNF772Q68DY9 489 aaPredicted RBP15.94■□□□□ 0.14
HDLBP-227ENST00000458564 METP08581 1390 aa15.94■□□□□ 0.14
HDLBP-227ENST00000458564 NEXMIFQ5QGS0 1516 aa15.94■□□□□ 0.14
HDLBP-227ENST00000458564 CLTCL1P53675 1640 aa15.93■□□□□ 0.14
HDLBP-227ENST00000458564 ADGRL3Q9HAR2 1447 aa15.93■□□□□ 0.14
HDLBP-227ENST00000458564 NHSL1Q5SYE7 1610 aa15.92■□□□□ 0.14
HDLBP-227ENST00000458564 MEX3CQ5U5Q3 659 aaKnown RBP15.91■□□□□ 0.14
HDLBP-227ENST00000458564 RRBP1Q9P2E9 1410 aaKnown RBP15.91■□□□□ 0.14
HDLBP-227ENST00000458564 ZNF326Q5BKZ1 582 aaKnown RBP15.9■□□□□ 0.14
HDLBP-227ENST00000458564 CDK12Q9NYV4 1490 aaPredicted RBP15.9■□□□□ 0.14
HDLBP-227ENST00000458564 NAIPQ13075 1403 aa15.89■□□□□ 0.13
HDLBP-227ENST00000458564 PRAG1Q86YV5 1406 aa15.89■□□□□ 0.13
HDLBP-227ENST00000458564 PTCH1Q13635 1447 aa15.88■□□□□ 0.13
HDLBP-227ENST00000458564 NALCNQ8IZF0 1738 aa15.88■□□□□ 0.13
HDLBP-227ENST00000458564 LRRC59Q96AG4 307 aaKnown RBP15.86■□□□□ 0.13
HDLBP-227ENST00000458564 LAMC1P11047 1609 aa15.86■□□□□ 0.13
HDLBP-227ENST00000458564 PNPLA6Q8IY17 1366 aa15.85■□□□□ 0.13
HDLBP-227ENST00000458564 KIF1BO60333 1816 aa15.84■□□□□ 0.13
HDLBP-227ENST00000458564 RXRBP28702 533 aa15.84■□□□□ 0.13
HDLBP-227ENST00000458564 PPARGC1BQ86YN6 1023 aaKnown RBP15.84■□□□□ 0.13
HDLBP-227ENST00000458564 UPF1Q92900 1129 aaKnown RBP eCLIP15.84■□□□□ 0.13
HDLBP-227ENST00000458564 HFM1A2PYH4 1435 aa15.84■□□□□ 0.13
HDLBP-227ENST00000458564 C1orf167Q5SNV9 1468 aa15.84■□□□□ 0.13
HDLBP-227ENST00000458564 NUTM2BA6NNL0 878 aaPredicted RBP15.83■□□□□ 0.12
HDLBP-227ENST00000458564 NUTM2EB1AL46 878 aaPredicted RBP15.83■□□□□ 0.12
HDLBP-227ENST00000458564 NUTM2AQ8IVF1 878 aaPredicted RBP15.83■□□□□ 0.12
HDLBP-227ENST00000458564 TRIM52Q96A61 297 aa15.83■□□□□ 0.12
HDLBP-227ENST00000458564 AFF2P51816 1311 aa15.83■□□□□ 0.12
HDLBP-227ENST00000458564 VGFO15240 615 aaPredicted RBP15.82■□□□□ 0.12
HDLBP-227ENST00000458564 ROBO2Q9HCK4 1378 aa15.82■□□□□ 0.12
HDLBP-227ENST00000458564 RPGRIP1LQ68CZ1 1315 aa15.81■□□□□ 0.12
HDLBP-227ENST00000458564 DDX17Q92841 729 aaKnown RBP15.79■□□□□ 0.12
HDLBP-227ENST00000458564 SOS2Q07890 1332 aaPredicted RBP15.78■□□□□ 0.12
HDLBP-227ENST00000458564 RGS12O14924 1447 aa15.77■□□□□ 0.12
HDLBP-227ENST00000458564 C8orf37Q96NL8 207 aa15.77■□□□□ 0.12
HDLBP-227ENST00000458564 PPLO60437 1756 aa15.77■□□□□ 0.11
HDLBP-227ENST00000458564 CDC42BPGQ6DT37 1551 aa15.75■□□□□ 0.11
HDLBP-227ENST00000458564 RBM6P78332 1123 aaKnown RBP15.75■□□□□ 0.11
HDLBP-227ENST00000458564 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
HDLBP-227ENST00000458564 ORAI2Q96SN7 254 aa15.74■□□□□ 0.11
HDLBP-227ENST00000458564 QTRT2Q9H974 415 aaKnown RBP15.74■□□□□ 0.11
HDLBP-227ENST00000458564 COL22A1Q8NFW1 1626 aaPredicted RBP15.73■□□□□ 0.11
HDLBP-227ENST00000458564 TECPR2O15040 1411 aa15.73■□□□□ 0.11
HDLBP-227ENST00000458564 SRCAPQ6ZRS2 3230 aa15.72■□□□□ 0.11
HDLBP-227ENST00000458564 NGLY1Q96IV0 654 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms