RNA–Protein interactions for RNA: ENST00000455768.6

YIPF3-204, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-204ENST00000455768 MYO5BQ9ULV0 1848 aa31.22■■■□□ 2.59
YIPF3-204ENST00000455768 GCC2Q8IWJ2 1684 aa31.22■■■□□ 2.59
YIPF3-204ENST00000455768 TMEM131LA2VDJ0 1609 aa31.2■■■□□ 2.59
YIPF3-204ENST00000455768 E9PCH4 1651 aa31.19■■■□□ 2.58
YIPF3-204ENST00000455768 ITGAEP38570 1179 aa31.18■■■□□ 2.58
YIPF3-204ENST00000455768 NWD1Q149M9 1564 aa31.17■■■□□ 2.58
YIPF3-204ENST00000455768 RIMS2Q9UQ26 1411 aa31.17■■■□□ 2.58
YIPF3-204ENST00000455768 PROSER2Q86WR7 435 aaPredicted RBP31.17■■■□□ 2.58
YIPF3-204ENST00000455768 BCANQ96GW7 911 aa31.16■■■□□ 2.58
YIPF3-204ENST00000455768 IQGAP3Q86VI3 1631 aa31.15■■■□□ 2.58
YIPF3-204ENST00000455768 PLEKHG1Q9ULL1 1385 aa31.15■■■□□ 2.58
YIPF3-204ENST00000455768 NKTRP30414 1462 aaKnown RBP31.14■■■□□ 2.57
YIPF3-204ENST00000455768 FAM135BQ49AJ0 1406 aa31.12■■■□□ 2.57
YIPF3-204ENST00000455768 NUP155O75694 1391 aa31.11■■■□□ 2.57
YIPF3-204ENST00000455768 CHGAP10645 457 aaKnown RBP31.11■■■□□ 2.57
YIPF3-204ENST00000455768 PPP1R15AO75807 674 aaPredicted RBP31.1■■■□□ 2.57
YIPF3-204ENST00000455768 NUTM2DQ5VT03 806 aaPredicted RBP31.08■■■□□ 2.57
YIPF3-204ENST00000455768 PHF23Q9BUL5 403 aaPredicted RBP31.08■■■□□ 2.57
YIPF3-204ENST00000455768 ADAMTS13Q76LX8 1427 aa31.05■■■□□ 2.56
YIPF3-204ENST00000455768 CHD2O14647 1828 aaKnown RBP31.04■■■□□ 2.56
YIPF3-204ENST00000455768 HDGFP51858 240 aaKnown RBP31.04■■■□□ 2.56
YIPF3-204ENST00000455768 ROBO1Q9Y6N7 1651 aa31.03■■■□□ 2.56
YIPF3-204ENST00000455768 TBX22Q9Y458 520 aa31.03■■■□□ 2.56
YIPF3-204ENST00000455768 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.01■■■□□ 2.55
YIPF3-204ENST00000455768 MSH6P52701 1360 aa31■■■□□ 2.55
YIPF3-204ENST00000455768 RGS17Q9UGC6 210 aaPredicted RBP30.99■■■□□ 2.55
YIPF3-204ENST00000455768 SLAIN2Q9P270 581 aa30.95■■■□□ 2.55
YIPF3-204ENST00000455768 RRBP1Q9P2E9 1410 aaKnown RBP30.92■■■□□ 2.54
YIPF3-204ENST00000455768 DIP2AQ14689 1571 aa30.92■■■□□ 2.54
YIPF3-204ENST00000455768 SPHKAPQ2M3C7 1700 aa30.9■■■□□ 2.54
YIPF3-204ENST00000455768 PTPRUQ92729 1446 aa30.9■■■□□ 2.54
YIPF3-204ENST00000455768 PIK3R4Q99570 1358 aa30.88■■■□□ 2.53
YIPF3-204ENST00000455768 NCOA3Q9Y6Q9 1424 aa30.87■■■□□ 2.53
YIPF3-204ENST00000455768 NAIPQ13075 1403 aa30.86■■■□□ 2.53
YIPF3-204ENST00000455768 NRXN3Q9Y4C0 1643 aa30.85■■■□□ 2.53
YIPF3-204ENST00000455768 TRPM2O94759 1503 aa30.84■■■□□ 2.53
YIPF3-204ENST00000455768 AMOTL2Q9Y2J4 779 aa30.84■■■□□ 2.53
YIPF3-204ENST00000455768 C14orf37Q86TY3 774 aa30.83■■■□□ 2.53
YIPF3-204ENST00000455768 PHLPP1O60346 1717 aa30.81■■■□□ 2.52
YIPF3-204ENST00000455768 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.81■■■□□ 2.52
YIPF3-204ENST00000455768 CLTCL1P53675 1640 aa30.8■■■□□ 2.52
YIPF3-204ENST00000455768 SETBP1Q9Y6X0 1596 aa30.8■■■□□ 2.52
YIPF3-204ENST00000455768 C19orf44Q9H6X5 657 aa30.8■■■□□ 2.52
YIPF3-204ENST00000455768 COL16A1Q07092 1604 aaPredicted RBP30.78■■■□□ 2.52
YIPF3-204ENST00000455768 ZNF326Q5BKZ1 582 aaKnown RBP30.78■■■□□ 2.52
YIPF3-204ENST00000455768 POTEAQ6S8J7 498 aa30.78■■■□□ 2.52
YIPF3-204ENST00000455768 CADPS2Q86UW7 1296 aa30.76■■■□□ 2.51
YIPF3-204ENST00000455768 METP08581 1390 aa30.76■■■□□ 2.51
YIPF3-204ENST00000455768 XRN1Q8IZH2 1706 aaKnown RBP30.76■■■□□ 2.51
YIPF3-204ENST00000455768 JCADQ9P266 1359 aa30.75■■■□□ 2.51
YIPF3-204ENST00000455768 NEXMIFQ5QGS0 1516 aa30.74■■■□□ 2.51
YIPF3-204ENST00000455768 ATF3P18847 181 aa30.74■■■□□ 2.51
YIPF3-204ENST00000455768 HFM1A2PYH4 1435 aa30.71■■■□□ 2.51
YIPF3-204ENST00000455768 AHDC1Q5TGY3 1603 aaPredicted RBP30.69■■■□□ 2.5
YIPF3-204ENST00000455768 BRINP3Q76B58 766 aa30.67■■■□□ 2.5
YIPF3-204ENST00000455768 TRIM52Q96A61 297 aa30.66■■■□□ 2.5
YIPF3-204ENST00000455768 LRP6O75581 1613 aa30.65■■■□□ 2.5
YIPF3-204ENST00000455768 DCCP43146 1447 aa30.65■■■□□ 2.5
YIPF3-204ENST00000455768 KIF1BO60333 1816 aa30.62■■■□□ 2.49
YIPF3-204ENST00000455768 MST1RQ04912 1400 aa30.62■■■□□ 2.49
YIPF3-204ENST00000455768 ASXL1Q8IXJ9 1541 aa30.59■■■□□ 2.49
YIPF3-204ENST00000455768 SLC4A1APQ9BWU0 796 aaKnown RBP30.59■■■□□ 2.49
YIPF3-204ENST00000455768 SPATA31A6Q5VVP1 1343 aa30.58■■■□□ 2.49
YIPF3-204ENST00000455768 ADGRL3Q9HAR2 1447 aa30.57■■■□□ 2.48
YIPF3-204ENST00000455768 SHPRHQ149N8 1683 aa30.55■■■□□ 2.48
YIPF3-204ENST00000455768 SETD1AO15047 1707 aaKnown RBP30.55■■■□□ 2.48
YIPF3-204ENST00000455768 NALCNQ8IZF0 1738 aa30.55■■■□□ 2.48
YIPF3-204ENST00000455768 FOXD1Q16676 465 aa30.54■■■□□ 2.48
YIPF3-204ENST00000455768 VGFO15240 615 aaPredicted RBP30.52■■■□□ 2.48
YIPF3-204ENST00000455768 DDX17Q92841 729 aaKnown RBP30.51■■■□□ 2.47
YIPF3-204ENST00000455768 ROBO2Q9HCK4 1378 aa30.51■■■□□ 2.47
YIPF3-204ENST00000455768 NHSL1Q5SYE7 1610 aa30.49■■■□□ 2.47
YIPF3-204ENST00000455768 RPGRIP1LQ68CZ1 1315 aa30.48■■■□□ 2.47
YIPF3-204ENST00000455768 PTCH1Q13635 1447 aa30.48■■■□□ 2.47
YIPF3-204ENST00000455768 SETD5Q9C0A6 1442 aa30.48■■■□□ 2.47
YIPF3-204ENST00000455768 MEX3CQ5U5Q3 659 aaKnown RBP30.48■■■□□ 2.47
YIPF3-204ENST00000455768 PPLO60437 1756 aa30.46■■■□□ 2.47
YIPF3-204ENST00000455768 NUTM2BA6NNL0 878 aaPredicted RBP30.45■■■□□ 2.47
YIPF3-204ENST00000455768 NUTM2EB1AL46 878 aaPredicted RBP30.45■■■□□ 2.47
YIPF3-204ENST00000455768 NUTM2AQ8IVF1 878 aaPredicted RBP30.45■■■□□ 2.47
YIPF3-204ENST00000455768 PRAG1Q86YV5 1406 aa30.43■■■□□ 2.46
YIPF3-204ENST00000455768 C1orf167Q5SNV9 1468 aa30.43■■■□□ 2.46
YIPF3-204ENST00000455768 ZNF772Q68DY9 489 aaPredicted RBP30.4■■■□□ 2.46
YIPF3-204ENST00000455768 LRRC59Q96AG4 307 aaKnown RBP30.39■■■□□ 2.46
YIPF3-204ENST00000455768 ADGRF5Q8IZF2 1346 aa30.39■■■□□ 2.46
YIPF3-204ENST00000455768 PNPLA6Q8IY17 1366 aa30.38■■■□□ 2.45
YIPF3-204ENST00000455768 SPATA31E1Q6ZUB1 1445 aa30.38■■■□□ 2.45
YIPF3-204ENST00000455768 ORAI2Q96SN7 254 aa30.37■■■□□ 2.45
YIPF3-204ENST00000455768 MPHOSPH9Q99550 1183 aa30.37■■■□□ 2.45
YIPF3-204ENST00000455768 CCDC144AA2RUR9 1427 aa30.37■■■□□ 2.45
YIPF3-204ENST00000455768 RGL3Q3MIN7 710 aa30.35■■■□□ 2.45
YIPF3-204ENST00000455768 AFF2P51816 1311 aa30.32■■■□□ 2.44
YIPF3-204ENST00000455768 LAMC1P11047 1609 aa30.32■■■□□ 2.44
YIPF3-204ENST00000455768 SOS2Q07890 1332 aaPredicted RBP30.28■■■□□ 2.44
YIPF3-204ENST00000455768 IFT172Q9UG01 1749 aa30.27■■■□□ 2.44
YIPF3-204ENST00000455768 RXRBP28702 533 aa30.26■■■□□ 2.43
YIPF3-204ENST00000455768 C8orf37Q96NL8 207 aa30.26■■■□□ 2.43
YIPF3-204ENST00000455768 ANKRD30BQ9BXX2 1392 aa30.26■■■□□ 2.43
YIPF3-204ENST00000455768 STK26Q9P289 416 aa30.25■■■□□ 2.43
YIPF3-204ENST00000455768 TMEM132EQ6IEE7 984 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms