RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SETD1AO15047 1707 aaKnown RBP36.48■■■■□ 3.43
PTPRA-208ENST00000455631 FGD6Q6ZV73 1430 aa36.47■■■■□ 3.43
PTPRA-208ENST00000455631 APLP2Q06481 763 aa36.41■■■■□ 3.42
PTPRA-208ENST00000455631 SLC52A1Q9NWF4 448 aa36.41■■■■□ 3.42
PTPRA-208ENST00000455631 SLAIN2Q9P270 581 aa36.41■■■■□ 3.42
PTPRA-208ENST00000455631 JCADQ9P266 1359 aa36.4■■■■□ 3.42
PTPRA-208ENST00000455631 MYO5BQ9ULV0 1848 aa36.39■■■■□ 3.42
PTPRA-208ENST00000455631 CHD2O14647 1828 aaKnown RBP36.38■■■■□ 3.41
PTPRA-208ENST00000455631 GCC2Q8IWJ2 1684 aa36.36■■■■□ 3.41
PTPRA-208ENST00000455631 ZFYVE9O95405 1425 aa36.35■■■■□ 3.41
PTPRA-208ENST00000455631 PLEKHG1Q9ULL1 1385 aa36.35■■■■□ 3.41
PTPRA-208ENST00000455631 RPRD2Q5VT52 1461 aaKnown RBP36.35■■■■□ 3.41
PTPRA-208ENST00000455631 COL16A1Q07092 1604 aaPredicted RBP36.34■■■■□ 3.41
PTPRA-208ENST00000455631 PPP1R15AO75807 674 aaPredicted RBP36.34■■■■□ 3.41
PTPRA-208ENST00000455631 RIMS2Q9UQ26 1411 aa36.31■■■■□ 3.4
PTPRA-208ENST00000455631 ADGRL2O95490 1459 aa36.31■■■■□ 3.4
PTPRA-208ENST00000455631 TMEM131LA2VDJ0 1609 aa36.27■■■■□ 3.4
PTPRA-208ENST00000455631 HDGFP51858 240 aaKnown RBP36.25■■■■□ 3.39
PTPRA-208ENST00000455631 C14orf37Q86TY3 774 aa36.25■■■■□ 3.39
PTPRA-208ENST00000455631 LRP6O75581 1613 aa36.25■■■■□ 3.39
PTPRA-208ENST00000455631 ANKRD50Q9ULJ7 1429 aa36.24■■■■□ 3.39
PTPRA-208ENST00000455631 MEX3CQ5U5Q3 659 aaKnown RBP36.21■■■■□ 3.39
PTPRA-208ENST00000455631 NCOA3Q9Y6Q9 1424 aa36.21■■■■□ 3.39
PTPRA-208ENST00000455631 SPATA31A6Q5VVP1 1343 aa36.2■■■■□ 3.39
PTPRA-208ENST00000455631 TBX22Q9Y458 520 aa36.19■■■■□ 3.38
PTPRA-208ENST00000455631 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.18■■■■□ 3.38
PTPRA-208ENST00000455631 AHDC1Q5TGY3 1603 aaPredicted RBP36.17■■■■□ 3.38
PTPRA-208ENST00000455631 CHGAP10645 457 aaKnown RBP36.17■■■■□ 3.38
PTPRA-208ENST00000455631 FAM50AQ14320 339 aaKnown RBP36.16■■■■□ 3.38
PTPRA-208ENST00000455631 SHPRHQ149N8 1683 aa36.16■■■■□ 3.38
PTPRA-208ENST00000455631 DIP2AQ14689 1571 aa36.15■■■■□ 3.38
PTPRA-208ENST00000455631 ZNF772Q68DY9 489 aaPredicted RBP36.14■■■■□ 3.38
PTPRA-208ENST00000455631 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.14■■■■□ 3.38
PTPRA-208ENST00000455631 ADAMTS13Q76LX8 1427 aa36.14■■■■□ 3.38
PTPRA-208ENST00000455631 NUTM2DQ5VT03 806 aaPredicted RBP36.13■■■■□ 3.37
PTPRA-208ENST00000455631 CADPS2Q86UW7 1296 aa36.13■■■■□ 3.37
PTPRA-208ENST00000455631 ATF3P18847 181 aa36.12■■■■□ 3.37
PTPRA-208ENST00000455631 TRIM52Q96A61 297 aa36.12■■■■□ 3.37
PTPRA-208ENST00000455631 UNC13BO14795 1591 aa36.11■■■■□ 3.37
PTPRA-208ENST00000455631 C19orf44Q9H6X5 657 aa36.09■■■■□ 3.37
PTPRA-208ENST00000455631 E9PCH4 1651 aa36.09■■■■□ 3.37
PTPRA-208ENST00000455631 PIK3R4Q99570 1358 aa36.07■■■■□ 3.36
PTPRA-208ENST00000455631 UPF1Q92900 1129 aaKnown RBP eCLIP36.07■■■■□ 3.36
PTPRA-208ENST00000455631 TRPM2O94759 1503 aa36.05■■■■□ 3.36
PTPRA-208ENST00000455631 BRINP3Q76B58 766 aa35.99■■■■□ 3.35
PTPRA-208ENST00000455631 NUTM2BA6NNL0 878 aaPredicted RBP35.98■■■■□ 3.35
PTPRA-208ENST00000455631 NUTM2EB1AL46 878 aaPredicted RBP35.98■■■■□ 3.35
PTPRA-208ENST00000455631 NUTM2AQ8IVF1 878 aaPredicted RBP35.98■■■■□ 3.35
PTPRA-208ENST00000455631 AMOTL2Q9Y2J4 779 aa35.98■■■■□ 3.35
PTPRA-208ENST00000455631 IQGAP3Q86VI3 1631 aa35.97■■■■□ 3.35
PTPRA-208ENST00000455631 RXRBP28702 533 aa35.97■■■■□ 3.35
PTPRA-208ENST00000455631 PTPRUQ92729 1446 aa35.97■■■■□ 3.35
PTPRA-208ENST00000455631 ASXL1Q8IXJ9 1541 aa35.94■■■■□ 3.34
PTPRA-208ENST00000455631 DCCP43146 1447 aa35.93■■■■□ 3.34
PTPRA-208ENST00000455631 CDK12Q9NYV4 1490 aaPredicted RBP35.91■■■■□ 3.34
PTPRA-208ENST00000455631 XRN1Q8IZH2 1706 aaKnown RBP35.91■■■■□ 3.34
PTPRA-208ENST00000455631 NHSL1Q5SYE7 1610 aa35.89■■■■□ 3.34
PTPRA-208ENST00000455631 AFF2P51816 1311 aa35.88■■■■□ 3.33
PTPRA-208ENST00000455631 NRXN3Q9Y4C0 1643 aa35.88■■■■□ 3.33
PTPRA-208ENST00000455631 SETD5Q9C0A6 1442 aa35.86■■■■□ 3.33
PTPRA-208ENST00000455631 MST1RQ04912 1400 aa35.85■■■■□ 3.33
PTPRA-208ENST00000455631 SETBP1Q9Y6X0 1596 aa35.84■■■■□ 3.33
PTPRA-208ENST00000455631 NUP155O75694 1391 aa35.83■■■■□ 3.33
PTPRA-208ENST00000455631 ROCK1Q13464 1354 aa35.83■■■■□ 3.33
PTPRA-208ENST00000455631 LRRC59Q96AG4 307 aaKnown RBP35.77■■■■□ 3.32
PTPRA-208ENST00000455631 C8orf37Q96NL8 207 aa35.77■■■■□ 3.32
PTPRA-208ENST00000455631 SPHKAPQ2M3C7 1700 aa35.77■■■■□ 3.32
PTPRA-208ENST00000455631 RGS12O14924 1447 aa35.76■■■■□ 3.32
PTPRA-208ENST00000455631 METP08581 1390 aa35.75■■■■□ 3.31
PTPRA-208ENST00000455631 ADGRL3Q9HAR2 1447 aa35.74■■■■□ 3.31
PTPRA-208ENST00000455631 ZNF326Q5BKZ1 582 aaKnown RBP35.73■■■■□ 3.31
PTPRA-208ENST00000455631 DDX17Q92841 729 aaKnown RBP35.73■■■■□ 3.31
PTPRA-208ENST00000455631 NALCNQ8IZF0 1738 aa35.73■■■■□ 3.31
PTPRA-208ENST00000455631 PNPLA6Q8IY17 1366 aa35.73■■■■□ 3.31
PTPRA-208ENST00000455631 QTRT2Q9H974 415 aaKnown RBP35.69■■■■□ 3.3
PTPRA-208ENST00000455631 RBM6P78332 1123 aaKnown RBP35.68■■■■□ 3.3
PTPRA-208ENST00000455631 ITGAEP38570 1179 aa35.66■■■■□ 3.3
PTPRA-208ENST00000455631 NEXMIFQ5QGS0 1516 aa35.62■■■■□ 3.29
PTPRA-208ENST00000455631 ADAMTS2O95450 1211 aa35.61■■■■□ 3.29
PTPRA-208ENST00000455631 NGLY1Q96IV0 654 aa35.6■■■■□ 3.29
PTPRA-208ENST00000455631 CLTCL1P53675 1640 aa35.59■■■■□ 3.29
PTPRA-208ENST00000455631 C1orf167Q5SNV9 1468 aa35.59■■■■□ 3.29
PTPRA-208ENST00000455631 LAMC1P11047 1609 aa35.55■■■■□ 3.28
PTPRA-208ENST00000455631 KIF1BO60333 1816 aa35.52■■■■□ 3.28
PTPRA-208ENST00000455631 ATAD2Q6PL18 1390 aa35.51■■■■□ 3.28
PTPRA-208ENST00000455631 PTCH1Q13635 1447 aa35.5■■■■□ 3.27
PTPRA-208ENST00000455631 USP21Q9UK80 565 aa35.49■■■■□ 3.27
PTPRA-208ENST00000455631 ORAI2Q96SN7 254 aa35.47■■■■□ 3.27
PTPRA-208ENST00000455631 SOS2Q07890 1332 aaPredicted RBP35.47■■■■□ 3.27
PTPRA-208ENST00000455631 TRPC5Q9UL62 973 aaPredicted RBP35.45■■■■□ 3.27
PTPRA-208ENST00000455631 ROBO2Q9HCK4 1378 aa35.45■■■■□ 3.27
PTPRA-208ENST00000455631 COL22A1Q8NFW1 1626 aaPredicted RBP35.41■■■■□ 3.26
PTPRA-208ENST00000455631 ATRNO75882 1429 aa35.38■■■■□ 3.25
PTPRA-208ENST00000455631 FNBP4Q8N3X1 1017 aaPredicted RBP35.37■■■■□ 3.25
PTPRA-208ENST00000455631 SRCAPQ6ZRS2 3230 aa35.35■■■■□ 3.25
PTPRA-208ENST00000455631 PRAG1Q86YV5 1406 aa35.35■■■■□ 3.25
PTPRA-208ENST00000455631 VGFO15240 615 aaPredicted RBP35.35■■■■□ 3.25
PTPRA-208ENST00000455631 HFM1A2PYH4 1435 aa35.33■■■■□ 3.25
PTPRA-208ENST00000455631 FOXD1Q16676 465 aa35.32■■■■□ 3.24
PTPRA-208ENST00000455631 MYOM2P54296 1465 aa35.31■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms