RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 UGGT1Q9NYU2 1555 aa9.54□□□□□ -0.88
ECHDC1-210ENST00000454859 MYO3AQ8NEV4 1616 aa9.54□□□□□ -0.88
ECHDC1-210ENST00000454859 CCER2I3L3R5 266 aa9.54□□□□□ -0.88
ECHDC1-210ENST00000454859 CARD11Q9BXL7 1154 aa9.54□□□□□ -0.88
ECHDC1-210ENST00000454859 TMEM131LA2VDJ0 1609 aa9.53□□□□□ -0.88
ECHDC1-210ENST00000454859 SCAF11Q99590 1463 aaKnown RBP9.53□□□□□ -0.88
ECHDC1-210ENST00000454859 KTN1Q86UP2 1357 aaKnown RBP9.52□□□□□ -0.88
ECHDC1-210ENST00000454859 CDCA8Q53HL2 280 aa9.51□□□□□ -0.89
ECHDC1-210ENST00000454859 SBNO2Q9Y2G9 1366 aa9.51□□□□□ -0.89
ECHDC1-210ENST00000454859 NEXMIFQ5QGS0 1516 aa9.51□□□□□ -0.89
ECHDC1-210ENST00000454859 VGFO15240 615 aaPredicted RBP9.51□□□□□ -0.89
ECHDC1-210ENST00000454859 CFAP65Q6ZU64 1925 aaKnown RBP9.51□□□□□ -0.89
ECHDC1-210ENST00000454859 PIK3C2GO75747 1445 aa9.5□□□□□ -0.89
ECHDC1-210ENST00000454859 WASHC2AQ641Q2 1341 aa9.5□□□□□ -0.89
ECHDC1-210ENST00000454859 ANP32CO43423 234 aa9.49□□□□□ -0.89
ECHDC1-210ENST00000454859 RGL3Q3MIN7 710 aa9.49□□□□□ -0.89
ECHDC1-210ENST00000454859 PUS7Q96PZ0 661 aaKnown RBP9.49□□□□□ -0.89
ECHDC1-210ENST00000454859 KDM2AQ9Y2K7 1162 aa9.49□□□□□ -0.89
ECHDC1-210ENST00000454859 NLRP1Q9C000 1473 aa9.49□□□□□ -0.89
ECHDC1-210ENST00000454859 ESF1Q9H501 851 aaKnown RBP9.48□□□□□ -0.89
ECHDC1-210ENST00000454859 HDGFP51858 240 aaKnown RBP9.48□□□□□ -0.89
ECHDC1-210ENST00000454859 DDX10Q13206 875 aaKnown RBP9.48□□□□□ -0.89
ECHDC1-210ENST00000454859 MIER1Q8N108 512 aa9.48□□□□□ -0.89
ECHDC1-210ENST00000454859 KIF7Q2M1P5 1343 aa9.47□□□□□ -0.89
ECHDC1-210ENST00000454859 CENPBP07199 599 aaPredicted RBP9.47□□□□□ -0.89
ECHDC1-210ENST00000454859 C14orf93Q9H972 538 aaKnown RBP9.47□□□□□ -0.89
ECHDC1-210ENST00000454859 MYO5BQ9ULV0 1848 aa9.47□□□□□ -0.89
ECHDC1-210ENST00000454859 FER1L4A9Z1Z3 1794 aa9.47□□□□□ -0.89
ECHDC1-210ENST00000454859 CACNB1Q02641 598 aaPredicted RBP9.47□□□□□ -0.89
ECHDC1-210ENST00000454859 ZNF326Q5BKZ1 582 aaKnown RBP9.46□□□□□ -0.9
ECHDC1-210ENST00000454859 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.46□□□□□ -0.9
ECHDC1-210ENST00000454859 ZMYM3Q14202 1370 aa9.46□□□□□ -0.9
ECHDC1-210ENST00000454859 ADGRB1O14514 1584 aa9.46□□□□□ -0.9
ECHDC1-210ENST00000454859 TRHP20396 242 aaPredicted RBP9.45□□□□□ -0.9
ECHDC1-210ENST00000454859 TMF1P82094 1093 aa9.45□□□□□ -0.9
ECHDC1-210ENST00000454859 IDI1Q13907 227 aa9.44□□□□□ -0.9
ECHDC1-210ENST00000454859 A2ML1A8K2U0 1454 aa9.44□□□□□ -0.9
ECHDC1-210ENST00000454859 ST20-MTHFSA0A0A6YYL1 179 aa9.44□□□□□ -0.9
ECHDC1-210ENST00000454859 TESK2Q96S53 571 aa9.43□□□□□ -0.9
ECHDC1-210ENST00000454859 DLC1Q96QB1 1528 aa9.43□□□□□ -0.9
ECHDC1-210ENST00000454859 C3P01024 1663 aa9.43□□□□□ -0.9
ECHDC1-210ENST00000454859 UBR1Q8IWV7 1749 aa9.43□□□□□ -0.9
ECHDC1-210ENST00000454859 TNRQ92752 1358 aa9.43□□□□□ -0.9
ECHDC1-210ENST00000454859 NBPF1Q3BBV0 1214 aa9.42□□□□□ -0.9
ECHDC1-210ENST00000454859 KNDC1Q76NI1 1749 aa9.42□□□□□ -0.9
ECHDC1-210ENST00000454859 ARHGEF28Q8N1W1 1705 aaKnown RBP9.42□□□□□ -0.9
ECHDC1-210ENST00000454859 ADGRF5Q8IZF2 1346 aa9.41□□□□□ -0.9
ECHDC1-210ENST00000454859 NPC1L1Q9UHC9 1359 aa9.41□□□□□ -0.9
ECHDC1-210ENST00000454859 QRICH2Q9H0J4 1663 aa9.41□□□□□ -0.9
ECHDC1-210ENST00000454859 C11orf95C9JLR9 678 aaPredicted RBP9.4□□□□□ -0.9
ECHDC1-210ENST00000454859 SETD1BQ9UPS6 1966 aaKnown RBP9.4□□□□□ -0.9
ECHDC1-210ENST00000454859 NINLQ9Y2I6 1382 aa9.4□□□□□ -0.9
ECHDC1-210ENST00000454859 SETD1AO15047 1707 aaKnown RBP9.4□□□□□ -0.9
ECHDC1-210ENST00000454859 SIRT1Q96EB6 747 aa9.4□□□□□ -0.9
ECHDC1-210ENST00000454859 ADAMTSL3P82987 1691 aa9.4□□□□□ -0.91
ECHDC1-210ENST00000454859 SLIT1O75093 1534 aa9.39□□□□□ -0.91
ECHDC1-210ENST00000454859 RALBP1Q15311 655 aa9.39□□□□□ -0.91
ECHDC1-210ENST00000454859 DIP2AQ14689 1571 aa9.39□□□□□ -0.91
ECHDC1-210ENST00000454859 ALKQ9UM73 1620 aa9.39□□□□□ -0.91
ECHDC1-210ENST00000454859 RIMS2Q9UQ26 1411 aa9.39□□□□□ -0.91
ECHDC1-210ENST00000454859 HIRIP3Q9BW71 556 aaPredicted RBP9.39□□□□□ -0.91
ECHDC1-210ENST00000454859 INSRP06213 1382 aa9.39□□□□□ -0.91
ECHDC1-210ENST00000454859 ZNF142P52746 1687 aaPredicted RBP9.38□□□□□ -0.91
ECHDC1-210ENST00000454859 CHGAP10645 457 aaKnown RBP9.38□□□□□ -0.91
ECHDC1-210ENST00000454859 PRKRIP1Q9H875 184 aaPredicted RBP9.38□□□□□ -0.91
ECHDC1-210ENST00000454859 CENPJQ9HC77 1338 aaPredicted RBP9.38□□□□□ -0.91
ECHDC1-210ENST00000454859 ARHGAP23Q9P227 1491 aa9.38□□□□□ -0.91
ECHDC1-210ENST00000454859 USP32Q8NFA0 1604 aa9.38□□□□□ -0.91
ECHDC1-210ENST00000454859 CFAP70Q5T0N1 1121 aa9.37□□□□□ -0.91
ECHDC1-210ENST00000454859 STAG3Q9UJ98 1225 aa9.37□□□□□ -0.91
ECHDC1-210ENST00000454859 MYOM1P52179 1685 aa9.37□□□□□ -0.91
ECHDC1-210ENST00000454859 TECPR2O15040 1411 aa9.36□□□□□ -0.91
ECHDC1-210ENST00000454859 TMEM2Q9UHN6 1383 aa9.36□□□□□ -0.91
ECHDC1-210ENST00000454859 LRPPRCP42704 1394 aaKnown RBP9.36□□□□□ -0.91
ECHDC1-210ENST00000454859 ABCC11Q96J66 1382 aa9.36□□□□□ -0.91
ECHDC1-210ENST00000454859 FBXO31Q5XUX0 539 aaPredicted RBP9.36□□□□□ -0.91
ECHDC1-210ENST00000454859 FAM135BQ49AJ0 1406 aa9.35□□□□□ -0.91
ECHDC1-210ENST00000454859 DISP3Q9P2K9 1392 aa9.35□□□□□ -0.91
ECHDC1-210ENST00000454859 NRXN3Q9Y4C0 1643 aa9.35□□□□□ -0.91
ECHDC1-210ENST00000454859 ASXL1Q8IXJ9 1541 aa9.35□□□□□ -0.91
ECHDC1-210ENST00000454859 YTHDC2Q9H6S0 1430 aaKnown RBP9.35□□□□□ -0.91
ECHDC1-210ENST00000454859 PLEKHG1Q9ULL1 1385 aa9.35□□□□□ -0.91
ECHDC1-210ENST00000454859 BRD4O60885 1362 aaPredicted RBP9.34□□□□□ -0.91
ECHDC1-210ENST00000454859 CPS1P31327 1500 aa9.34□□□□□ -0.91
ECHDC1-210ENST00000454859 PARD3Q8TEW0 1356 aa9.34□□□□□ -0.91
ECHDC1-210ENST00000454859 EVC2Q86UK5 1308 aa9.33□□□□□ -0.92
ECHDC1-210ENST00000454859 PTPRMP28827 1452 aa9.33□□□□□ -0.92
ECHDC1-210ENST00000454859 PIK3R4Q99570 1358 aa9.33□□□□□ -0.92
ECHDC1-210ENST00000454859 THEMISQ8N1K5 641 aaPredicted RBP9.33□□□□□ -0.92
ECHDC1-210ENST00000454859 MED14O60244 1454 aa9.32□□□□□ -0.92
ECHDC1-210ENST00000454859 PER1O15534 1290 aaPredicted RBP9.32□□□□□ -0.92
ECHDC1-210ENST00000454859 MLECQ14165 292 aa9.32□□□□□ -0.92
ECHDC1-210ENST00000454859 RIMS1Q86UR5 1692 aaKnown RBP9.32□□□□□ -0.92
ECHDC1-210ENST00000454859 MYBBP1AQ9BQG0 1328 aaKnown RBP9.32□□□□□ -0.92
ECHDC1-210ENST00000454859 CEP170BQ9Y4F5 1589 aaPredicted RBP9.32□□□□□ -0.92
ECHDC1-210ENST00000454859 ATAD2Q6PL18 1390 aa9.32□□□□□ -0.92
ECHDC1-210ENST00000454859 EID1Q9Y6B2 187 aa9.31□□□□□ -0.92
ECHDC1-210ENST00000454859 NSD2O96028 1365 aa9.31□□□□□ -0.92
ECHDC1-210ENST00000454859 ADGRB2O60241 1585 aa9.31□□□□□ -0.92
ECHDC1-210ENST00000454859 NLRP13Q86W25 1043 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms