RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 MINK1Q8N4C8 1332 aaPredicted RBP14.78□□□□□ -0.04
SEC16A-207ENST00000453963 MIA2Q96PC5 1412 aa14.78□□□□□ -0.04
SEC16A-207ENST00000453963 RRBP1Q9P2E9 1410 aaKnown RBP14.77□□□□□ -0.04
SEC16A-207ENST00000453963 CHMP4CQ96CF2 233 aa14.77□□□□□ -0.05
SEC16A-207ENST00000453963 TMX4Q9H1E5 349 aaPredicted RBP14.77□□□□□ -0.05
SEC16A-207ENST00000453963 LRRC9Q6ZRR7 1453 aa14.76□□□□□ -0.05
SEC16A-207ENST00000453963 GOLGA6L19H0YKK7 550 aa14.76□□□□□ -0.05
SEC16A-207ENST00000453963 RILPL2Q969X0 211 aa14.75□□□□□ -0.05
SEC16A-207ENST00000453963 API5Q9BZZ5 524 aaKnown RBP14.75□□□□□ -0.05
SEC16A-207ENST00000453963 FAM13BQ9NYF5 915 aa14.75□□□□□ -0.05
SEC16A-207ENST00000453963 RUNDC1Q96C34 613 aa14.75□□□□□ -0.05
SEC16A-207ENST00000453963 SF3A1Q15459 793 aaKnown RBP14.75□□□□□ -0.05
SEC16A-207ENST00000453963 ELL2O00472 640 aaPredicted RBP14.75□□□□□ -0.05
SEC16A-207ENST00000453963 STAC3Q96MF2 364 aa14.75□□□□□ -0.05
SEC16A-207ENST00000453963 CUX1P39880 1505 aa14.74□□□□□ -0.05
SEC16A-207ENST00000453963 BECN2A8MW95 431 aa14.74□□□□□ -0.05
SEC16A-207ENST00000453963 MAP7D2Q96T17 732 aa14.73□□□□□ -0.05
SEC16A-207ENST00000453963 BACH2Q9BYV9 841 aa14.73□□□□□ -0.05
SEC16A-207ENST00000453963 GRIN2BQ13224 1484 aa14.72□□□□□ -0.05
SEC16A-207ENST00000453963 H3BQV1 296 aa14.72□□□□□ -0.05
SEC16A-207ENST00000453963 IFFO2Q5TF58 517 aa14.72□□□□□ -0.05
SEC16A-207ENST00000453963 MTERF4Q7Z6M4 381 aaKnown RBP14.72□□□□□ -0.05
SEC16A-207ENST00000453963 TPM3P06753 285 aa14.71□□□□□ -0.05
SEC16A-207ENST00000453963 INTS3Q68E01 1043 aaKnown RBP14.71□□□□□ -0.05
SEC16A-207ENST00000453963 NOC3LQ8WTT2 800 aaKnown RBP14.71□□□□□ -0.05
SEC16A-207ENST00000453963 ROCK1Q13464 1354 aa14.71□□□□□ -0.06
SEC16A-207ENST00000453963 TRAK2O60296 914 aa14.71□□□□□ -0.06
SEC16A-207ENST00000453963 FOXD4L6Q3SYB3 417 aaPredicted RBP14.7□□□□□ -0.06
SEC16A-207ENST00000453963 FOXD4L3Q6VB84 417 aaPredicted RBP14.7□□□□□ -0.06
SEC16A-207ENST00000453963 FAM184AQ8NB25 1140 aa14.7□□□□□ -0.06
SEC16A-207ENST00000453963 RASSF8Q8NHQ8 419 aa14.7□□□□□ -0.06
SEC16A-207ENST00000453963 RUFY2Q8WXA3 655 aa14.7□□□□□ -0.06
SEC16A-207ENST00000453963 BRPF3Q9ULD4 1205 aa14.7□□□□□ -0.06
SEC16A-207ENST00000453963 ANKRD50Q9ULJ7 1429 aa14.7□□□□□ -0.06
SEC16A-207ENST00000453963 FRAT2O75474 233 aaPredicted RBP14.7□□□□□ -0.06
SEC16A-207ENST00000453963 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.7□□□□□ -0.06
SEC16A-207ENST00000453963 NASPP49321 788 aaPredicted RBP14.69□□□□□ -0.06
SEC16A-207ENST00000453963 NCBP3Q53F19 620 aaKnown RBP14.69□□□□□ -0.06
SEC16A-207ENST00000453963 DIAPH1O60610 1272 aaKnown RBP14.69□□□□□ -0.06
SEC16A-207ENST00000453963 TEFQ10587 303 aa14.69□□□□□ -0.06
SEC16A-207ENST00000453963 PANK1Q8TE04 598 aa14.69□□□□□ -0.06
SEC16A-207ENST00000453963 ZNF771Q7L3S4 317 aaPredicted RBP14.68□□□□□ -0.06
SEC16A-207ENST00000453963 AFAP1Q8N556 730 aa14.68□□□□□ -0.06
SEC16A-207ENST00000453963 LNPKQ9C0E8 428 aa14.68□□□□□ -0.06
SEC16A-207ENST00000453963 DIAPH3Q9NSV4 1193 aa14.68□□□□□ -0.06
SEC16A-207ENST00000453963 CFTRP13569 1480 aa14.68□□□□□ -0.06
SEC16A-207ENST00000453963 SMG6Q86US8 1419 aaKnown RBP14.68□□□□□ -0.06
SEC16A-207ENST00000453963 ZKSCAN1P17029 563 aaPredicted RBP14.68□□□□□ -0.06
SEC16A-207ENST00000453963 RIPK4P57078 832 aa14.68□□□□□ -0.06
SEC16A-207ENST00000453963 ADAMTS8Q9UP79 889 aa14.68□□□□□ -0.06
SEC16A-207ENST00000453963 CASKIN1Q8WXD9 1431 aa14.68□□□□□ -0.06
SEC16A-207ENST00000453963 MCTP1Q6DN14 999 aa14.68□□□□□ -0.06
SEC16A-207ENST00000453963 CDCA7LQ96GN5 454 aa14.68□□□□□ -0.06
SEC16A-207ENST00000453963 TPM2P07951 284 aa14.68□□□□□ -0.06
SEC16A-207ENST00000453963 GPS2Q13227 327 aa14.67□□□□□ -0.06
SEC16A-207ENST00000453963 C1orf141Q5JVX7 400 aa14.67□□□□□ -0.06
SEC16A-207ENST00000453963 IL27Q8NEV9 243 aa14.67□□□□□ -0.06
SEC16A-207ENST00000453963 TOMM22Q9NS69 142 aa14.67□□□□□ -0.06
SEC16A-207ENST00000453963 GTF2E1P29083 439 aaPredicted RBP14.67□□□□□ -0.06
SEC16A-207ENST00000453963 PDE3AQ14432 1141 aa14.67□□□□□ -0.06
SEC16A-207ENST00000453963 CCDC39Q9UFE4 941 aa14.66□□□□□ -0.06
SEC16A-207ENST00000453963 CDC45O75419 566 aa14.66□□□□□ -0.06
SEC16A-207ENST00000453963 AKNAQ7Z591 1439 aa14.65□□□□□ -0.06
SEC16A-207ENST00000453963 PNISRQ8TF01 805 aaKnown RBP14.65□□□□□ -0.06
SEC16A-207ENST00000453963 ANO2Q9NQ90 1003 aa14.65□□□□□ -0.06
SEC16A-207ENST00000453963 NCOA2Q15596 1464 aa14.65□□□□□ -0.06
SEC16A-207ENST00000453963 FYCO1Q9BQS8 1478 aa14.64□□□□□ -0.07
SEC16A-207ENST00000453963 EVA1CP58658 441 aa14.64□□□□□ -0.07
SEC16A-207ENST00000453963 GNAI1P63096 354 aa14.64□□□□□ -0.07
SEC16A-207ENST00000453963 ZNF592Q92610 1267 aa14.64□□□□□ -0.07
SEC16A-207ENST00000453963 G3V3G9 751 aa14.64□□□□□ -0.07
SEC16A-207ENST00000453963 PSME1Q06323 249 aa14.64□□□□□ -0.07
SEC16A-207ENST00000453963 DCAF8Q5TAQ9 597 aa14.64□□□□□ -0.07
SEC16A-207ENST00000453963 R3HCC1Q9Y3T6 440 aaKnown RBP14.64□□□□□ -0.07
SEC16A-207ENST00000453963 ERICH3Q5RHP9 1530 aa14.63□□□□□ -0.07
SEC16A-207ENST00000453963 MBD3O95983 291 aa14.63□□□□□ -0.07
SEC16A-207ENST00000453963 SMC3Q9UQE7 1217 aa14.63□□□□□ -0.07
SEC16A-207ENST00000453963 PRG4Q92954 1404 aaPredicted RBP14.62□□□□□ -0.07
SEC16A-207ENST00000453963 SYNJ2O15056 1496 aa14.62□□□□□ -0.07
SEC16A-207ENST00000453963 A0A0U1RQG5 324 aaPredicted RBP14.62□□□□□ -0.07
SEC16A-207ENST00000453963 ARAP1Q96P48 1450 aa14.62□□□□□ -0.07
SEC16A-207ENST00000453963 CCDC173Q0VFZ6 552 aa14.62□□□□□ -0.07
SEC16A-207ENST00000453963 TEX35Q5T0J7 233 aa14.62□□□□□ -0.07
SEC16A-207ENST00000453963 AEBP2Q6ZN18 517 aaPredicted RBP14.62□□□□□ -0.07
SEC16A-207ENST00000453963 ANO8Q9HCE9 1232 aaPredicted RBP14.62□□□□□ -0.07
SEC16A-207ENST00000453963 PDZRN3Q9UPQ7 1066 aa14.62□□□□□ -0.07
SEC16A-207ENST00000453963 TPM1P09493 284 aa14.61□□□□□ -0.07
SEC16A-207ENST00000453963 RNF20Q5VTR2 975 aa14.61□□□□□ -0.07
SEC16A-207ENST00000453963 CREBRFQ8IUR6 639 aa14.61□□□□□ -0.07
SEC16A-207ENST00000453963 BICD2Q8TD16 824 aa14.61□□□□□ -0.07
SEC16A-207ENST00000453963 NESP48681 1621 aa14.61□□□□□ -0.07
SEC16A-207ENST00000453963 TSR1Q2NL82 804 aaKnown RBP14.61□□□□□ -0.07
SEC16A-207ENST00000453963 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
SEC16A-207ENST00000453963 MARCH6O60337 910 aa14.61□□□□□ -0.07
SEC16A-207ENST00000453963 LRRFIP1Q32MZ4 808 aaKnown RBP14.61□□□□□ -0.07
SEC16A-207ENST00000453963 CPLX2Q6PUV4 134 aaKnown RBP14.61□□□□□ -0.07
SEC16A-207ENST00000453963 CCAR2Q8N163 923 aaKnown RBP14.61□□□□□ -0.07
SEC16A-207ENST00000453963 PPP2R1AP30153 589 aa14.6□□□□□ -0.07
SEC16A-207ENST00000453963 CEP89Q96ST8 783 aa14.6□□□□□ -0.07
SEC16A-207ENST00000453963 NINLQ9Y2I6 1382 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms