RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 ACIN1Q9UKV3 1341 aaKnown RBP21.8■■□□□ 1.08
VPS16-205ENST00000453689 MPHOSPH9Q99550 1183 aa21.79■■□□□ 1.08
VPS16-205ENST00000453689 CPS1P31327 1500 aa21.77■■□□□ 1.08
VPS16-205ENST00000453689 FOXD1Q16676 465 aa21.77■■□□□ 1.08
VPS16-205ENST00000453689 IQSEC2Q5JU85 1478 aa21.77■■□□□ 1.07
VPS16-205ENST00000453689 ILDR1Q86SU0 546 aaPredicted RBP21.75■■□□□ 1.07
VPS16-205ENST00000453689 FBXO41Q8TF61 875 aa21.75■■□□□ 1.07
VPS16-205ENST00000453689 CHD2O14647 1828 aaKnown RBP21.74■■□□□ 1.07
VPS16-205ENST00000453689 PPLO60437 1756 aa21.74■■□□□ 1.07
VPS16-205ENST00000453689 PLEKHG1Q9ULL1 1385 aa21.74■■□□□ 1.07
VPS16-205ENST00000453689 XIRP1Q702N8 1843 aaKnown RBP21.73■■□□□ 1.07
VPS16-205ENST00000453689 HDGFP51858 240 aaKnown RBP21.73■■□□□ 1.07
VPS16-205ENST00000453689 NEXMIFQ5QGS0 1516 aa21.73■■□□□ 1.07
VPS16-205ENST00000453689 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.72■■□□□ 1.07
VPS16-205ENST00000453689 PPP1R15AO75807 674 aaPredicted RBP21.71■■□□□ 1.07
VPS16-205ENST00000453689 NRXN3Q9Y4C0 1643 aa21.7■■□□□ 1.06
VPS16-205ENST00000453689 NUTM2DQ5VT03 806 aaPredicted RBP21.7■■□□□ 1.06
VPS16-205ENST00000453689 IFT172Q9UG01 1749 aa21.69■■□□□ 1.06
VPS16-205ENST00000453689 HRCP23327 699 aa21.69■■□□□ 1.06
VPS16-205ENST00000453689 SLC26A8Q96RN1 970 aa21.69■■□□□ 1.06
VPS16-205ENST00000453689 DIP2AQ14689 1571 aa21.69■■□□□ 1.06
VPS16-205ENST00000453689 ZNF326Q5BKZ1 582 aaKnown RBP21.68■■□□□ 1.06
VPS16-205ENST00000453689 SENP3Q9H4L4 574 aaPredicted RBP21.68■■□□□ 1.06
VPS16-205ENST00000453689 CCDC144AA2RUR9 1427 aa21.68■■□□□ 1.06
VPS16-205ENST00000453689 NWD1Q149M9 1564 aa21.68■■□□□ 1.06
VPS16-205ENST00000453689 BCANQ96GW7 911 aa21.67■■□□□ 1.06
VPS16-205ENST00000453689 SETBP1Q9Y6X0 1596 aa21.66■■□□□ 1.06
VPS16-205ENST00000453689 LRRC7Q96NW7 1537 aa21.65■■□□□ 1.06
VPS16-205ENST00000453689 ADAMTS13Q76LX8 1427 aa21.65■■□□□ 1.06
VPS16-205ENST00000453689 PCGF6Q9BYE7 350 aa21.63■■□□□ 1.05
VPS16-205ENST00000453689 SETD1AO15047 1707 aaKnown RBP21.62■■□□□ 1.05
VPS16-205ENST00000453689 SPATA31E1Q6ZUB1 1445 aa21.61■■□□□ 1.05
VPS16-205ENST00000453689 TBX22Q9Y458 520 aa21.6■■□□□ 1.05
VPS16-205ENST00000453689 KCNA6P17658 529 aa21.59■■□□□ 1.05
VPS16-205ENST00000453689 NKTRP30414 1462 aaKnown RBP21.58■■□□□ 1.05
VPS16-205ENST00000453689 RPGRIP1LQ68CZ1 1315 aa21.57■■□□□ 1.04
VPS16-205ENST00000453689 ANKRD30BQ9BXX2 1392 aa21.57■■□□□ 1.04
VPS16-205ENST00000453689 ALKQ9UM73 1620 aa21.56■■□□□ 1.04
VPS16-205ENST00000453689 XRN1Q8IZH2 1706 aaKnown RBP21.56■■□□□ 1.04
VPS16-205ENST00000453689 PIK3R4Q99570 1358 aa21.55■■□□□ 1.04
VPS16-205ENST00000453689 VGFO15240 615 aaPredicted RBP21.54■■□□□ 1.04
VPS16-205ENST00000453689 UBAP1LF5GYI3 381 aa21.53■■□□□ 1.04
VPS16-205ENST00000453689 RGL3Q3MIN7 710 aa21.53■■□□□ 1.04
VPS16-205ENST00000453689 PTPRUQ92729 1446 aa21.52■■□□□ 1.04
VPS16-205ENST00000453689 TMEM94Q12767 1356 aa21.5■■□□□ 1.03
VPS16-205ENST00000453689 PROSER2Q86WR7 435 aaPredicted RBP21.5■■□□□ 1.03
VPS16-205ENST00000453689 METP08581 1390 aa21.49■■□□□ 1.03
VPS16-205ENST00000453689 TOM1O60784 492 aa21.47■■□□□ 1.03
VPS16-205ENST00000453689 RBM33Q96EV2 1170 aaKnown RBP21.47■■□□□ 1.03
VPS16-205ENST00000453689 ADGRF5Q8IZF2 1346 aa21.47■■□□□ 1.03
VPS16-205ENST00000453689 AMOTL2Q9Y2J4 779 aa21.45■■□□□ 1.02
VPS16-205ENST00000453689 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.45■■□□□ 1.02
VPS16-205ENST00000453689 MYOM2P54296 1465 aa21.45■■□□□ 1.02
VPS16-205ENST00000453689 LAMC1P11047 1609 aa21.44■■□□□ 1.02
VPS16-205ENST00000453689 PIK3C2GO75747 1445 aa21.43■■□□□ 1.02
VPS16-205ENST00000453689 PIP4K2BP78356 416 aa21.42■■□□□ 1.02
VPS16-205ENST00000453689 NRXN1Q9ULB1 1477 aa21.42■■□□□ 1.02
VPS16-205ENST00000453689 NALCNQ8IZF0 1738 aa21.41■■□□□ 1.02
VPS16-205ENST00000453689 NCOA3Q9Y6Q9 1424 aa21.41■■□□□ 1.02
VPS16-205ENST00000453689 KNDC1Q76NI1 1749 aa21.41■■□□□ 1.02
VPS16-205ENST00000453689 SCAF1Q9H7N4 1312 aaKnown RBP21.4■■□□□ 1.02
VPS16-205ENST00000453689 ASXL1Q8IXJ9 1541 aa21.39■■□□□ 1.02
VPS16-205ENST00000453689 MSH6P52701 1360 aa21.39■■□□□ 1.02
VPS16-205ENST00000453689 ROBO1Q9Y6N7 1651 aa21.37■■□□□ 1.01
VPS16-205ENST00000453689 PRAG1Q86YV5 1406 aa21.37■■□□□ 1.01
VPS16-205ENST00000453689 PTCH1Q13635 1447 aa21.36■■□□□ 1.01
VPS16-205ENST00000453689 DHX57Q6P158 1386 aaKnown RBP21.35■■□□□ 1.01
VPS16-205ENST00000453689 C14orf37Q86TY3 774 aa21.33■■□□□ 1.01
VPS16-205ENST00000453689 DCAF11Q8TEB1 546 aa21.32■■□□□ 1
VPS16-205ENST00000453689 ROBO2Q9HCK4 1378 aa21.32■■□□□ 1
VPS16-205ENST00000453689 C19orf44Q9H6X5 657 aa21.31■■□□□ 1
VPS16-205ENST00000453689 C14orf93Q9H972 538 aaKnown RBP21.3■■□□□ 1
VPS16-205ENST00000453689 KDM2AQ9Y2K7 1162 aa21.3■■□□□ 1
VPS16-205ENST00000453689 DCCP43146 1447 aa21.29■■□□□ 1
VPS16-205ENST00000453689 ADGRL3Q9HAR2 1447 aa21.29■■□□□ 1
VPS16-205ENST00000453689 LRPPRCP42704 1394 aaKnown RBP21.29■■□□□ 1
VPS16-205ENST00000453689 CFAP70Q5T0N1 1121 aa21.29■■□□□ 1
VPS16-205ENST00000453689 TMEM132EQ6IEE7 984 aa21.29■■□□□ 1
VPS16-205ENST00000453689 KIAA1210Q9ULL0 1709 aa21.29■■□□□ 1
VPS16-205ENST00000453689 TECPR2O15040 1411 aa21.29■■□□□ 1
VPS16-205ENST00000453689 FAM135BQ49AJ0 1406 aa21.29■■□□□ 1
VPS16-205ENST00000453689 HSPA1LP34931 641 aa21.28■■□□□ 1
VPS16-205ENST00000453689 YTHDC2Q9H6S0 1430 aaKnown RBP21.28■■□□□ 1
VPS16-205ENST00000453689 STAC3Q96MF2 364 aa21.27■■□□□ 1
VPS16-205ENST00000453689 ADGRB1O14514 1584 aa21.27■□□□□ 0.99
VPS16-205ENST00000453689 PHLPP1O60346 1717 aa21.26■□□□□ 0.99
VPS16-205ENST00000453689 CADPS2Q86UW7 1296 aa21.26■□□□□ 0.99
VPS16-205ENST00000453689 SLAIN2Q9P270 581 aa21.26■□□□□ 0.99
VPS16-205ENST00000453689 ABCC11Q96J66 1382 aa21.25■□□□□ 0.99
VPS16-205ENST00000453689 ATF3P18847 181 aa21.25■□□□□ 0.99
VPS16-205ENST00000453689 SIN3AQ96ST3 1273 aa21.25■□□□□ 0.99
VPS16-205ENST00000453689 STK26Q9P289 416 aa21.25■□□□□ 0.99
VPS16-205ENST00000453689 MST1RQ04912 1400 aa21.21■□□□□ 0.99
VPS16-205ENST00000453689 ARHGEF28Q8N1W1 1705 aaKnown RBP21.21■□□□□ 0.99
VPS16-205ENST00000453689 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
VPS16-205ENST00000453689 DLC1Q96QB1 1528 aa21.2■□□□□ 0.98
VPS16-205ENST00000453689 NEUROD1Q13562 356 aa21.19■□□□□ 0.98
VPS16-205ENST00000453689 WAPLQ7Z5K2 1190 aa21.19■□□□□ 0.98
VPS16-205ENST00000453689 PLEKHH1Q9ULM0 1364 aa21.19■□□□□ 0.98
VPS16-205ENST00000453689 NHSL1Q5SYE7 1610 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms