RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 NBPF3Q9H094 633 aa10.27□□□□□ -0.77
USP25-206ENST00000453553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.26□□□□□ -0.77
USP25-206ENST00000453553 RCCD1A6NED2 376 aa10.26□□□□□ -0.77
USP25-206ENST00000453553 MDM2Q00987 491 aaPredicted RBP10.26□□□□□ -0.77
USP25-206ENST00000453553 TTLL12Q14166 644 aaPredicted RBP10.26□□□□□ -0.77
USP25-206ENST00000453553 TMUB1Q9BVT8 246 aa10.26□□□□□ -0.77
USP25-206ENST00000453553 REPIN1Q9BWE0 567 aaKnown RBP10.26□□□□□ -0.77
USP25-206ENST00000453553 KDM4CQ9H3R0 1056 aa10.26□□□□□ -0.77
USP25-206ENST00000453553 CLCN1P35523 988 aa10.25□□□□□ -0.77
USP25-206ENST00000453553 NLRP7Q8WX94 980 aa10.25□□□□□ -0.77
USP25-206ENST00000453553 DNAJB2P25686 324 aa10.24□□□□□ -0.77
USP25-206ENST00000453553 GPCPD1Q9NPB8 672 aa10.24□□□□□ -0.77
USP25-206ENST00000453553 ITGBL1O95965 494 aaPredicted RBP10.23□□□□□ -0.77
USP25-206ENST00000453553 SEPT9Q9UHD8 586 aaPredicted RBP10.23□□□□□ -0.77
USP25-206ENST00000453553 GIGYF2Q6Y7W6 1299 aaKnown RBP10.22□□□□□ -0.77
USP25-206ENST00000453553 LAPTM4BQ86VI4 370 aa10.22□□□□□ -0.77
USP25-206ENST00000453553 DAXXQ9UER7 740 aaPredicted RBP10.22□□□□□ -0.77
USP25-206ENST00000453553 BCAMP50895 628 aa10.21□□□□□ -0.77
USP25-206ENST00000453553 SSTR3P32745 418 aaPredicted RBP10.2□□□□□ -0.78
USP25-206ENST00000453553 FAM98CQ17RN3 349 aaKnown RBP10.2□□□□□ -0.78
USP25-206ENST00000453553 TMEM134Q9H6X4 195 aa10.2□□□□□ -0.78
USP25-206ENST00000453553 ANKK1Q8NFD2 765 aa10.19□□□□□ -0.78
USP25-206ENST00000453553 HDGFP51858 240 aaKnown RBP10.18□□□□□ -0.78
USP25-206ENST00000453553 FAM217BQ9NTX9 383 aaPredicted RBP10.18□□□□□ -0.78
USP25-206ENST00000453553 SOWAHBA6NEL2 793 aa10.17□□□□□ -0.78
USP25-206ENST00000453553 MS4A1P11836 297 aa10.17□□□□□ -0.78
USP25-206ENST00000453553 TMEM132AQ24JP5 1023 aa10.17□□□□□ -0.78
USP25-206ENST00000453553 FAM117AQ9C073 453 aa10.17□□□□□ -0.78
USP25-206ENST00000453553 SWT1Q5T5J6 900 aaKnown RBP10.16□□□□□ -0.78
USP25-206ENST00000453553 IL27Q8NEV9 243 aa10.16□□□□□ -0.78
USP25-206ENST00000453553 ZFRQ96KR1 1074 aaKnown RBP10.15□□□□□ -0.78
USP25-206ENST00000453553 DDRGK1Q96HY6 314 aa10.14□□□□□ -0.79
USP25-206ENST00000453553 WBP1LQ9NX94 342 aa10.14□□□□□ -0.79
USP25-206ENST00000453553 SAMD7Q7Z3H4 446 aa10.13□□□□□ -0.79
USP25-206ENST00000453553 SULF1Q8IWU6 871 aa10.13□□□□□ -0.79
USP25-206ENST00000453553 DDX11L8A8MPP1 907 aa10.12□□□□□ -0.79
USP25-206ENST00000453553 Q6ZNB5 142 aa10.12□□□□□ -0.79
USP25-206ENST00000453553 PLEKHG3A1L390 1219 aa10.11□□□□□ -0.79
USP25-206ENST00000453553 CD46P15529 392 aa10.11□□□□□ -0.79
USP25-206ENST00000453553 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
USP25-206ENST00000453553 RSPH4AQ5TD94 716 aa10.1□□□□□ -0.79
USP25-206ENST00000453553 SLC4A3P48751 1232 aa10.09□□□□□ -0.79
USP25-206ENST00000453553 KCNC4Q03721 635 aa10.09□□□□□ -0.79
USP25-206ENST00000453553 NYAP1Q6ZVC0 841 aa10.09□□□□□ -0.79
USP25-206ENST00000453553 SLF2Q8IX21 1173 aa10.09□□□□□ -0.79
USP25-206ENST00000453553 LCE2BO14633 110 aa10.08□□□□□ -0.8
USP25-206ENST00000453553 SLC10A3P09131 477 aa10.08□□□□□ -0.8
USP25-206ENST00000453553 RDH13Q8NBN7 331 aa10.08□□□□□ -0.8
USP25-206ENST00000453553 LRCH3Q96II8 777 aa10.08□□□□□ -0.8
USP25-206ENST00000453553 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.07□□□□□ -0.8
USP25-206ENST00000453553 RNF40O75150 1001 aa10.04□□□□□ -0.8
USP25-206ENST00000453553 GCGRP47871 477 aa10.04□□□□□ -0.8
USP25-206ENST00000453553 RSPH6AQ9H0K4 717 aa10.04□□□□□ -0.8
USP25-206ENST00000453553 DIXDC1Q155Q3 683 aa10.03□□□□□ -0.8
USP25-206ENST00000453553 NUTM1Q86Y26 1132 aa10.02□□□□□ -0.81
USP25-206ENST00000453553 SPIRE2Q8WWL2 714 aa10.02□□□□□ -0.81
USP25-206ENST00000453553 NECTIN2Q92692 538 aa10.02□□□□□ -0.81
USP25-206ENST00000453553 TBC1D2Q9BYX2 928 aa10.02□□□□□ -0.81
USP25-206ENST00000453553 GOPCQ9HD26 462 aa10.02□□□□□ -0.81
USP25-206ENST00000453553 TSR3Q9UJK0 312 aaKnown RBP10.02□□□□□ -0.81
USP25-206ENST00000453553 HPS5Q9UPZ3 1129 aa10.02□□□□□ -0.81
USP25-206ENST00000453553 PPP4CP60510 307 aa10.01□□□□□ -0.81
USP25-206ENST00000453553 KDM4AO75164 1064 aa10□□□□□ -0.81
USP25-206ENST00000453553 SH3D19Q5HYK7 790 aa10□□□□□ -0.81
USP25-206ENST00000453553 CFHP08603 1231 aa9.99□□□□□ -0.81
USP25-206ENST00000453553 SKIV2LQ15477 1246 aaKnown RBP9.99□□□□□ -0.81
USP25-206ENST00000453553 KMT5BQ4FZB7 885 aa9.98□□□□□ -0.81
USP25-206ENST00000453553 MYSM1Q5VVJ2 828 aa9.98□□□□□ -0.81
USP25-206ENST00000453553 GFRA3O60609 400 aa9.97□□□□□ -0.81
USP25-206ENST00000453553 USP46P62068 366 aa9.97□□□□□ -0.81
USP25-206ENST00000453553 LAPTM4AQ15012 233 aa9.96□□□□□ -0.82
USP25-206ENST00000453553 POLR3EQ9NVU0 708 aa9.96□□□□□ -0.82
USP25-206ENST00000453553 TRAF7Q6Q0C0 670 aa9.95□□□□□ -0.82
USP25-206ENST00000453553 RIC3Q7Z5B4 369 aa9.95□□□□□ -0.82
USP25-206ENST00000453553 PCMTD1Q96MG8 357 aaPredicted RBP9.95□□□□□ -0.82
USP25-206ENST00000453553 PRR14Q9BWN1 585 aa9.95□□□□□ -0.82
USP25-206ENST00000453553 MOXD2PA6NHM9 499 aa9.94□□□□□ -0.82
USP25-206ENST00000453553 ACTN4O43707 911 aaKnown RBP9.94□□□□□ -0.82
USP25-206ENST00000453553 TJAP1Q5JTD0 557 aa9.94□□□□□ -0.82
USP25-206ENST00000453553 SPTLC1O15269 473 aa9.93□□□□□ -0.82
USP25-206ENST00000453553 HOXA2O43364 376 aa9.93□□□□□ -0.82
USP25-206ENST00000453553 NDUFV2P19404 249 aa9.93□□□□□ -0.82
USP25-206ENST00000453553 ATP6V1AP38606 617 aa9.93□□□□□ -0.82
USP25-206ENST00000453553 CLK2P49760 499 aaKnown RBP9.93□□□□□ -0.82
USP25-206ENST00000453553 FUT2Q10981 343 aa9.93□□□□□ -0.82
USP25-206ENST00000453553 GRIPAP1Q4V328 841 aa9.93□□□□□ -0.82
USP25-206ENST00000453553 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
USP25-206ENST00000453553 GJA5P36382 358 aa9.92□□□□□ -0.82
USP25-206ENST00000453553 APLP1P51693 650 aa9.92□□□□□ -0.82
USP25-206ENST00000453553 RSBN1LQ6PCB5 846 aaPredicted RBP9.92□□□□□ -0.82
USP25-206ENST00000453553 GTF3C3Q9Y5Q9 886 aa9.92□□□□□ -0.82
USP25-206ENST00000453553 TUSC1Q2TAM9 212 aa9.91□□□□□ -0.82
USP25-206ENST00000453553 LIMD1Q9UGP4 676 aa9.91□□□□□ -0.82
USP25-206ENST00000453553 ATP1B4Q9UN42 357 aaPredicted RBP9.91□□□□□ -0.82
USP25-206ENST00000453553 PRKD2Q9BZL6 878 aa9.9□□□□□ -0.82
USP25-206ENST00000453553 FDX1P10109 184 aa9.89□□□□□ -0.83
USP25-206ENST00000453553 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.89□□□□□ -0.83
USP25-206ENST00000453553 PUS10Q3MIT2 529 aaKnown RBP9.88□□□□□ -0.83
USP25-206ENST00000453553 MORN1Q5T089 497 aa9.88□□□□□ -0.83
USP25-206ENST00000453553 HLA-CQ95604 372 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms