RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 RGL3Q3MIN7 710 aa21.3■■□□□ 1
NCKIPSD-207ENST00000453349 RIMS2Q9UQ26 1411 aa21.29■■□□□ 1
NCKIPSD-207ENST00000453349 RPGRIP1LQ68CZ1 1315 aa21.29■■□□□ 1
NCKIPSD-207ENST00000453349 SCAF11Q99590 1463 aaKnown RBP21.28■■□□□ 1
NCKIPSD-207ENST00000453349 BCANQ96GW7 911 aa21.27■■□□□ 1
NCKIPSD-207ENST00000453349 POLR1AO95602 1720 aaPredicted RBP21.26■□□□□ 0.99
NCKIPSD-207ENST00000453349 NUTM2DQ5VT03 806 aaPredicted RBP21.26■□□□□ 0.99
NCKIPSD-207ENST00000453349 NPHP4O75161 1426 aaPredicted RBP21.25■□□□□ 0.99
NCKIPSD-207ENST00000453349 ZFYVE9O95405 1425 aa21.24■□□□□ 0.99
NCKIPSD-207ENST00000453349 VGFO15240 615 aaPredicted RBP21.24■□□□□ 0.99
NCKIPSD-207ENST00000453349 MED14O60244 1454 aa21.24■□□□□ 0.99
NCKIPSD-207ENST00000453349 SPATA31E1Q6ZUB1 1445 aa21.22■□□□□ 0.99
NCKIPSD-207ENST00000453349 NEURL4Q96JN8 1562 aa21.21■□□□□ 0.99
NCKIPSD-207ENST00000453349 NEUROD1Q13562 356 aa21.2■□□□□ 0.98
NCKIPSD-207ENST00000453349 SIN3AQ96ST3 1273 aa21.2■□□□□ 0.98
NCKIPSD-207ENST00000453349 PLEKHG1Q9ULL1 1385 aa21.2■□□□□ 0.98
NCKIPSD-207ENST00000453349 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
NCKIPSD-207ENST00000453349 IQGAP1P46940 1657 aa21.18■□□□□ 0.98
NCKIPSD-207ENST00000453349 NEXMIFQ5QGS0 1516 aa21.18■□□□□ 0.98
NCKIPSD-207ENST00000453349 CCER1Q8TC90 406 aaPredicted RBP21.15■□□□□ 0.98
NCKIPSD-207ENST00000453349 DCAF11Q8TEB1 546 aa21.15■□□□□ 0.98
NCKIPSD-207ENST00000453349 STAC3Q96MF2 364 aa21.15■□□□□ 0.98
NCKIPSD-207ENST00000453349 SLC26A8Q96RN1 970 aa21.15■□□□□ 0.98
NCKIPSD-207ENST00000453349 KDM2AQ9Y2K7 1162 aa21.14■□□□□ 0.97
NCKIPSD-207ENST00000453349 PPLO60437 1756 aa21.14■□□□□ 0.97
NCKIPSD-207ENST00000453349 TBX22Q9Y458 520 aa21.13■□□□□ 0.97
NCKIPSD-207ENST00000453349 ADGRF5Q8IZF2 1346 aa21.11■□□□□ 0.97
NCKIPSD-207ENST00000453349 CLSPNQ9HAW4 1339 aa21.11■□□□□ 0.97
NCKIPSD-207ENST00000453349 IFT172Q9UG01 1749 aa21.09■□□□□ 0.97
NCKIPSD-207ENST00000453349 ZNF335Q9H4Z2 1342 aaPredicted RBP21.08■□□□□ 0.97
NCKIPSD-207ENST00000453349 SETBP1Q9Y6X0 1596 aa21.06■□□□□ 0.96
NCKIPSD-207ENST00000453349 ADAMTS13Q76LX8 1427 aa21.06■□□□□ 0.96
NCKIPSD-207ENST00000453349 L3MBTL2Q969R5 705 aa21.06■□□□□ 0.96
NCKIPSD-207ENST00000453349 MYOM2P54296 1465 aa21.06■□□□□ 0.96
NCKIPSD-207ENST00000453349 DIP2AQ14689 1571 aa21.06■□□□□ 0.96
NCKIPSD-207ENST00000453349 KCNA6P17658 529 aa21.04■□□□□ 0.96
NCKIPSD-207ENST00000453349 TONSLQ96HA7 1378 aa21.04■□□□□ 0.96
NCKIPSD-207ENST00000453349 PIK3R4Q99570 1358 aa21.02■□□□□ 0.96
NCKIPSD-207ENST00000453349 ALKQ9UM73 1620 aa21.01■□□□□ 0.95
NCKIPSD-207ENST00000453349 NRXN3Q9Y4C0 1643 aa21.01■□□□□ 0.95
NCKIPSD-207ENST00000453349 C14orf93Q9H972 538 aaKnown RBP21.01■□□□□ 0.95
NCKIPSD-207ENST00000453349 PIK3C2GO75747 1445 aa21.01■□□□□ 0.95
NCKIPSD-207ENST00000453349 NRXN1Q9ULB1 1477 aa21■□□□□ 0.95
NCKIPSD-207ENST00000453349 CFAP70Q5T0N1 1121 aa20.99■□□□□ 0.95
NCKIPSD-207ENST00000453349 AMOTL2Q9Y2J4 779 aa20.99■□□□□ 0.95
NCKIPSD-207ENST00000453349 METP08581 1390 aa20.98■□□□□ 0.95
NCKIPSD-207ENST00000453349 TIMELESSQ9UNS1 1208 aa20.97■□□□□ 0.95
NCKIPSD-207ENST00000453349 CPS1P31327 1500 aa20.97■□□□□ 0.95
NCKIPSD-207ENST00000453349 LTBP4Q8N2S1 1624 aa20.96■□□□□ 0.95
NCKIPSD-207ENST00000453349 PROSER2Q86WR7 435 aaPredicted RBP20.96■□□□□ 0.95
NCKIPSD-207ENST00000453349 CERKQ8TCT0 537 aa20.96■□□□□ 0.95
NCKIPSD-207ENST00000453349 CHD2O14647 1828 aaKnown RBP20.96■□□□□ 0.95
NCKIPSD-207ENST00000453349 TMEM132EQ6IEE7 984 aa20.95■□□□□ 0.94
NCKIPSD-207ENST00000453349 LAMC1P11047 1609 aa20.93■□□□□ 0.94
NCKIPSD-207ENST00000453349 PTPRUQ92729 1446 aa20.93■□□□□ 0.94
NCKIPSD-207ENST00000453349 STRCP1A6NGW2 1772 aa20.92■□□□□ 0.94
NCKIPSD-207ENST00000453349 PRAG1Q86YV5 1406 aa20.92■□□□□ 0.94
NCKIPSD-207ENST00000453349 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
NCKIPSD-207ENST00000453349 NWD1Q149M9 1564 aa20.91■□□□□ 0.94
NCKIPSD-207ENST00000453349 STK26Q9P289 416 aa20.91■□□□□ 0.94
NCKIPSD-207ENST00000453349 NKTRP30414 1462 aaKnown RBP20.9■□□□□ 0.94
NCKIPSD-207ENST00000453349 LRRC7Q96NW7 1537 aa20.88■□□□□ 0.93
NCKIPSD-207ENST00000453349 LRPPRCP42704 1394 aaKnown RBP20.87■□□□□ 0.93
NCKIPSD-207ENST00000453349 YTHDC2Q9H6S0 1430 aaKnown RBP20.87■□□□□ 0.93
NCKIPSD-207ENST00000453349 RBM33Q96EV2 1170 aaKnown RBP20.86■□□□□ 0.93
NCKIPSD-207ENST00000453349 TMEM94Q12767 1356 aa20.85■□□□□ 0.93
NCKIPSD-207ENST00000453349 ABCC11Q96J66 1382 aa20.85■□□□□ 0.93
NCKIPSD-207ENST00000453349 KIAA1210Q9ULL0 1709 aa20.85■□□□□ 0.93
NCKIPSD-207ENST00000453349 NBPF1Q3BBV0 1214 aa20.85■□□□□ 0.93
NCKIPSD-207ENST00000453349 NBPF8Q3BBV2 869 aa20.85■□□□□ 0.93
NCKIPSD-207ENST00000453349 C14orf37Q86TY3 774 aa20.85■□□□□ 0.93
NCKIPSD-207ENST00000453349 XRN1Q8IZH2 1706 aaKnown RBP20.84■□□□□ 0.93
NCKIPSD-207ENST00000453349 IQSEC2Q5JU85 1478 aa20.84■□□□□ 0.93
NCKIPSD-207ENST00000453349 SIRT1Q96EB6 747 aa20.84■□□□□ 0.93
NCKIPSD-207ENST00000453349 NCOA3Q9Y6Q9 1424 aa20.84■□□□□ 0.93
NCKIPSD-207ENST00000453349 TRAK1Q9UPV9 953 aa20.83■□□□□ 0.93
NCKIPSD-207ENST00000453349 ASXL1Q8IXJ9 1541 aa20.83■□□□□ 0.92
NCKIPSD-207ENST00000453349 ADGRB1O14514 1584 aa20.81■□□□□ 0.92
NCKIPSD-207ENST00000453349 ROBO2Q9HCK4 1378 aa20.81■□□□□ 0.92
NCKIPSD-207ENST00000453349 PTCH1Q13635 1447 aa20.8■□□□□ 0.92
NCKIPSD-207ENST00000453349 POGKQ9P215 609 aa20.8■□□□□ 0.92
NCKIPSD-207ENST00000453349 ROCK2O75116 1388 aaKnown RBP20.8■□□□□ 0.92
NCKIPSD-207ENST00000453349 TECPR2O15040 1411 aa20.79■□□□□ 0.92
NCKIPSD-207ENST00000453349 TRPM1Q7Z4N2 1603 aa20.79■□□□□ 0.92
NCKIPSD-207ENST00000453349 WAPLQ7Z5K2 1190 aa20.79■□□□□ 0.92
NCKIPSD-207ENST00000453349 C19orf44Q9H6X5 657 aa20.79■□□□□ 0.92
NCKIPSD-207ENST00000453349 MSH6P52701 1360 aa20.79■□□□□ 0.92
NCKIPSD-207ENST00000453349 TOM1O60784 492 aa20.78■□□□□ 0.92
NCKIPSD-207ENST00000453349 KNDC1Q76NI1 1749 aa20.78■□□□□ 0.92
NCKIPSD-207ENST00000453349 PRAM1Q96QH2 718 aa20.77■□□□□ 0.92
NCKIPSD-207ENST00000453349 FAM135BQ49AJ0 1406 aa20.77■□□□□ 0.91
NCKIPSD-207ENST00000453349 XIRP1Q702N8 1843 aaKnown RBP20.76■□□□□ 0.91
NCKIPSD-207ENST00000453349 UBAP1LF5GYI3 381 aa20.76■□□□□ 0.91
NCKIPSD-207ENST00000453349 DLC1Q96QB1 1528 aa20.75■□□□□ 0.91
NCKIPSD-207ENST00000453349 ATF3P18847 181 aa20.75■□□□□ 0.91
NCKIPSD-207ENST00000453349 CARD11Q9BXL7 1154 aa20.75■□□□□ 0.91
NCKIPSD-207ENST00000453349 SAFB2Q14151 953 aaKnown RBP eCLIP20.73■□□□□ 0.91
NCKIPSD-207ENST00000453349 CADPS2Q86UW7 1296 aa20.73■□□□□ 0.91
NCKIPSD-207ENST00000453349 RALGAPBQ86X10 1494 aa20.72■□□□□ 0.91
NCKIPSD-207ENST00000453349 PLEKHH1Q9ULM0 1364 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms