RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 SLFN5Q08AF3 891 aa16.47■□□□□ 0.23
THUMPD3-206ENST00000452837 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
THUMPD3-206ENST00000452837 CENPQQ7L2Z9 268 aaPredicted RBP16.46■□□□□ 0.23
THUMPD3-206ENST00000452837 BCAR3O75815 825 aa16.45■□□□□ 0.22
THUMPD3-206ENST00000452837 RTN4Q9NQC3 1192 aaKnown RBP16.45■□□□□ 0.22
THUMPD3-206ENST00000452837 APAF1O14727 1248 aa16.45■□□□□ 0.22
THUMPD3-206ENST00000452837 RGS3P49796 1198 aa16.45■□□□□ 0.22
THUMPD3-206ENST00000452837 IQGAP1P46940 1657 aa16.45■□□□□ 0.22
THUMPD3-206ENST00000452837 PPM1GO15355 546 aaPredicted RBP16.44■□□□□ 0.22
THUMPD3-206ENST00000452837 AFAP1Q8N556 730 aa16.44■□□□□ 0.22
THUMPD3-206ENST00000452837 USP35Q9P2H5 1018 aa16.44■□□□□ 0.22
THUMPD3-206ENST00000452837 TRMT2AQ8IZ69 625 aaKnown RBP16.43■□□□□ 0.22
THUMPD3-206ENST00000452837 DDRGK1Q96HY6 314 aa16.43■□□□□ 0.22
THUMPD3-206ENST00000452837 SCAF11Q99590 1463 aaKnown RBP16.43■□□□□ 0.22
THUMPD3-206ENST00000452837 ASXL1Q8IXJ9 1541 aa16.43■□□□□ 0.22
THUMPD3-206ENST00000452837 PLCH2O75038 1416 aa16.42■□□□□ 0.22
THUMPD3-206ENST00000452837 NFKBIBQ15653 356 aa16.42■□□□□ 0.22
THUMPD3-206ENST00000452837 FAM161AQ3B820 660 aa16.42■□□□□ 0.22
THUMPD3-206ENST00000452837 ABCC2Q92887 1545 aa16.41■□□□□ 0.22
THUMPD3-206ENST00000452837 EFCAB2Q5VUJ9 269 aa16.41■□□□□ 0.22
THUMPD3-206ENST00000452837 PIK3C2GO75747 1445 aa16.41■□□□□ 0.22
THUMPD3-206ENST00000452837 SYNMO15061 1565 aa16.41■□□□□ 0.22
THUMPD3-206ENST00000452837 CARD14Q9BXL6 1004 aa16.4■□□□□ 0.22
THUMPD3-206ENST00000452837 ANO8Q9HCE9 1232 aaPredicted RBP16.4■□□□□ 0.22
THUMPD3-206ENST00000452837 MYOM1P52179 1685 aa16.4■□□□□ 0.22
THUMPD3-206ENST00000452837 CHD1O14646 1710 aa16.39■□□□□ 0.21
THUMPD3-206ENST00000452837 CLTCL1P53675 1640 aa16.39■□□□□ 0.21
THUMPD3-206ENST00000452837 IGHDP01880 384 aa16.39■□□□□ 0.21
THUMPD3-206ENST00000452837 CFAP70Q5T0N1 1121 aa16.39■□□□□ 0.21
THUMPD3-206ENST00000452837 ABCC1P33527 1531 aa16.38■□□□□ 0.21
THUMPD3-206ENST00000452837 SPAG9O60271 1321 aaKnown RBP16.38■□□□□ 0.21
THUMPD3-206ENST00000452837 TRPM2O94759 1503 aa16.38■□□□□ 0.21
THUMPD3-206ENST00000452837 SCAPERQ9BY12 1400 aa16.38■□□□□ 0.21
THUMPD3-206ENST00000452837 CDCA8Q53HL2 280 aa16.37■□□□□ 0.21
THUMPD3-206ENST00000452837 PTPRTO14522 1441 aa16.37■□□□□ 0.21
THUMPD3-206ENST00000452837 CLASP1Q7Z460 1538 aa16.37■□□□□ 0.21
THUMPD3-206ENST00000452837 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.37■□□□□ 0.21
THUMPD3-206ENST00000452837 SPHKAPQ2M3C7 1700 aa16.37■□□□□ 0.21
THUMPD3-206ENST00000452837 SHROOM2Q13796 1616 aa16.36■□□□□ 0.21
THUMPD3-206ENST00000452837 NKTRP30414 1462 aaKnown RBP16.36■□□□□ 0.21
THUMPD3-206ENST00000452837 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
THUMPD3-206ENST00000452837 BRPF3Q9ULD4 1205 aa16.34■□□□□ 0.21
THUMPD3-206ENST00000452837 NPC1L1Q9UHC9 1359 aa16.34■□□□□ 0.21
THUMPD3-206ENST00000452837 UGGT1Q9NYU2 1555 aa16.34■□□□□ 0.21
THUMPD3-206ENST00000452837 ERVK-7P63135 1459 aa16.34■□□□□ 0.21
THUMPD3-206ENST00000452837 GSE1Q14687 1217 aa16.33■□□□□ 0.2
THUMPD3-206ENST00000452837 PANK1Q8TE04 598 aa16.33■□□□□ 0.2
THUMPD3-206ENST00000452837 FRAT1Q92837 279 aaPredicted RBP16.33■□□□□ 0.2
THUMPD3-206ENST00000452837 CEP152O94986 1710 aa16.33■□□□□ 0.2
THUMPD3-206ENST00000452837 EIF3AQ14152 1382 aaKnown RBP16.33■□□□□ 0.2
THUMPD3-206ENST00000452837 SEC24BO95487 1268 aa16.32■□□□□ 0.2
THUMPD3-206ENST00000452837 USP19O94966 1318 aa16.32■□□□□ 0.2
THUMPD3-206ENST00000452837 ZCCHC11Q5TAX3 1644 aaKnown RBP16.32■□□□□ 0.2
THUMPD3-206ENST00000452837 E9PSI1 815 aa16.32■□□□□ 0.2
THUMPD3-206ENST00000452837 ZFYVE16Q7Z3T8 1539 aa16.31■□□□□ 0.2
THUMPD3-206ENST00000452837 FRAT2O75474 233 aaPredicted RBP16.31■□□□□ 0.2
THUMPD3-206ENST00000452837 DAXXQ9UER7 740 aaPredicted RBP16.31■□□□□ 0.2
THUMPD3-206ENST00000452837 COG6Q9Y2V7 657 aa16.31■□□□□ 0.2
THUMPD3-206ENST00000452837 KIF3BO15066 747 aa16.3■□□□□ 0.2
THUMPD3-206ENST00000452837 RRP7AQ9Y3A4 280 aaKnown RBP16.3■□□□□ 0.2
THUMPD3-206ENST00000452837 TNNT2P45379 298 aaPredicted RBP16.3■□□□□ 0.2
THUMPD3-206ENST00000452837 NEUROD2Q15784 382 aa16.3■□□□□ 0.2
THUMPD3-206ENST00000452837 TNNQ9UQP3 1299 aa16.3■□□□□ 0.2
THUMPD3-206ENST00000452837 WWC1Q8IX03 1113 aa16.29■□□□□ 0.2
THUMPD3-206ENST00000452837 KDM5AP29375 1690 aaKnown RBP16.28■□□□□ 0.2
THUMPD3-206ENST00000452837 RTEL1-TNFRSF6BF6WH68 1400 aa16.27■□□□□ 0.19
THUMPD3-206ENST00000452837 STAC3Q96MF2 364 aa16.27■□□□□ 0.19
THUMPD3-206ENST00000452837 ABCA6Q8N139 1617 aa16.26■□□□□ 0.19
THUMPD3-206ENST00000452837 CENPJQ9HC77 1338 aaPredicted RBP16.26■□□□□ 0.19
THUMPD3-206ENST00000452837 CLUAP1Q96AJ1 413 aa16.25■□□□□ 0.19
THUMPD3-206ENST00000452837 DEPDC5O75140 1603 aa16.25■□□□□ 0.19
THUMPD3-206ENST00000452837 TET3O43151 1660 aa16.25■□□□□ 0.19
THUMPD3-206ENST00000452837 RLBP1P12271 317 aa16.24■□□□□ 0.19
THUMPD3-206ENST00000452837 BCL2L13Q9BXK5 485 aa16.24■□□□□ 0.19
THUMPD3-206ENST00000452837 SLC12A5Q9H2X9 1139 aa16.24■□□□□ 0.19
THUMPD3-206ENST00000452837 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
THUMPD3-206ENST00000452837 VWDEQ8N2E2 1590 aa16.23■□□□□ 0.19
THUMPD3-206ENST00000452837 MAP3K4Q9Y6R4 1608 aa16.23■□□□□ 0.19
THUMPD3-206ENST00000452837 CANXP27824 592 aaKnown RBP16.23■□□□□ 0.19
THUMPD3-206ENST00000452837 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
THUMPD3-206ENST00000452837 POLR3AO14802 1390 aaPredicted RBP16.22■□□□□ 0.19
THUMPD3-206ENST00000452837 KANK1Q14678 1352 aa16.22■□□□□ 0.19
THUMPD3-206ENST00000452837 TRAK1Q9UPV9 953 aa16.22■□□□□ 0.19
THUMPD3-206ENST00000452837 PCDHB15Q9Y5E8 787 aa16.22■□□□□ 0.19
THUMPD3-206ENST00000452837 NSD3Q9BZ95 1437 aa16.22■□□□□ 0.19
THUMPD3-206ENST00000452837 RARSP54136 660 aaKnown RBP16.21■□□□□ 0.19
THUMPD3-206ENST00000452837 ATP7AQ04656 1500 aa16.21■□□□□ 0.19
THUMPD3-206ENST00000452837 KIAA1210Q9ULL0 1709 aa16.21■□□□□ 0.19
THUMPD3-206ENST00000452837 MORC1Q86VD1 984 aa16.2■□□□□ 0.18
THUMPD3-206ENST00000452837 TCP11L2Q8N4U5 519 aa16.2■□□□□ 0.18
THUMPD3-206ENST00000452837 MROH1Q8NDA8 1641 aa16.2■□□□□ 0.18
THUMPD3-206ENST00000452837 MYOM2P54296 1465 aa16.2■□□□□ 0.18
THUMPD3-206ENST00000452837 UHRF1BP1LA0JNW5 1464 aa16.2■□□□□ 0.18
THUMPD3-206ENST00000452837 CHGAP10645 457 aaKnown RBP16.2■□□□□ 0.18
THUMPD3-206ENST00000452837 TMEM132EQ6IEE7 984 aa16.2■□□□□ 0.18
THUMPD3-206ENST00000452837 MROH2AA6NES4 1674 aa16.19■□□□□ 0.18
THUMPD3-206ENST00000452837 NOS1P29475 1434 aa16.19■□□□□ 0.18
THUMPD3-206ENST00000452837 NLRP1Q9C000 1473 aa16.18■□□□□ 0.18
THUMPD3-206ENST00000452837 SHPRHQ149N8 1683 aa16.18■□□□□ 0.18
THUMPD3-206ENST00000452837 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms