RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 NUDT18Q6ZVK8 323 aa8.33□□□□□ -1.08
VPS8-211ENST00000452140 RBM46Q8TBY0 533 aaKnown RBP8.33□□□□□ -1.08
VPS8-211ENST00000452140 THSD4Q6ZMP0 1018 aa8.32□□□□□ -1.08
VPS8-211ENST00000452140 WNT2BQ93097 391 aa8.32□□□□□ -1.08
VPS8-211ENST00000452140 DDRGK1Q96HY6 314 aa8.32□□□□□ -1.08
VPS8-211ENST00000452140 SSTR3P32745 418 aaPredicted RBP8.31□□□□□ -1.08
VPS8-211ENST00000452140 PNMA3Q9UL41 463 aa8.31□□□□□ -1.08
VPS8-211ENST00000452140 RCCD1A6NED2 376 aa8.3□□□□□ -1.08
VPS8-211ENST00000452140 NBPF26B4DH59 902 aa8.3□□□□□ -1.08
VPS8-211ENST00000452140 TATDN2Q93075 761 aa8.3□□□□□ -1.08
VPS8-211ENST00000452140 EYA1Q99502 592 aa8.3□□□□□ -1.08
VPS8-211ENST00000452140 TIMELESSQ9UNS1 1208 aa8.3□□□□□ -1.08
VPS8-211ENST00000452140 PACS2Q86VP3 889 aa8.29□□□□□ -1.08
VPS8-211ENST00000452140 FAM217BQ9NTX9 383 aaPredicted RBP8.29□□□□□ -1.08
VPS8-211ENST00000452140 RABGEF1Q9UJ41 708 aa8.29□□□□□ -1.08
VPS8-211ENST00000452140 IFFO2Q5TF58 517 aa8.28□□□□□ -1.08
VPS8-211ENST00000452140 KIAA1468Q9P260 1216 aa8.28□□□□□ -1.08
VPS8-211ENST00000452140 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.27□□□□□ -1.09
VPS8-211ENST00000452140 BEGAINQ9BUH8 593 aa8.27□□□□□ -1.09
VPS8-211ENST00000452140 DAXXQ9UER7 740 aaPredicted RBP8.27□□□□□ -1.09
VPS8-211ENST00000452140 RGS20O76081 388 aa8.26□□□□□ -1.09
VPS8-211ENST00000452140 SEPT9Q9UHD8 586 aaPredicted RBP8.26□□□□□ -1.09
VPS8-211ENST00000452140 DNAJB2P25686 324 aa8.25□□□□□ -1.09
VPS8-211ENST00000452140 ANKK1Q8NFD2 765 aa8.25□□□□□ -1.09
VPS8-211ENST00000452140 LAPTM4BQ86VI4 370 aa8.24□□□□□ -1.09
VPS8-211ENST00000452140 DDX11L8A8MPP1 907 aa8.23□□□□□ -1.09
VPS8-211ENST00000452140 ONECUT3O60422 494 aaPredicted RBP8.23□□□□□ -1.09
VPS8-211ENST00000452140 TMEM134Q9H6X4 195 aa8.23□□□□□ -1.09
VPS8-211ENST00000452140 C14orf37Q86TY3 774 aa8.22□□□□□ -1.09
VPS8-211ENST00000452140 SH3D19Q5HYK7 790 aa8.2□□□□□ -1.1
VPS8-211ENST00000452140 NYAP1Q6ZVC0 841 aa8.2□□□□□ -1.1
VPS8-211ENST00000452140 POLR3EQ9NVU0 708 aa8.2□□□□□ -1.1
VPS8-211ENST00000452140 CD46P15529 392 aa8.19□□□□□ -1.1
VPS8-211ENST00000452140 SWT1Q5T5J6 900 aaKnown RBP8.19□□□□□ -1.1
VPS8-211ENST00000452140 RDH13Q8NBN7 331 aa8.19□□□□□ -1.1
VPS8-211ENST00000452140 PCMTD1Q96MG8 357 aaPredicted RBP8.19□□□□□ -1.1
VPS8-211ENST00000452140 ATP1B4Q9UN42 357 aaPredicted RBP8.19□□□□□ -1.1
VPS8-211ENST00000452140 A0A0G2JS52 829 aa8.18□□□□□ -1.1
VPS8-211ENST00000452140 SOWAHBA6NEL2 793 aa8.18□□□□□ -1.1
VPS8-211ENST00000452140 MYSM1Q5VVJ2 828 aa8.18□□□□□ -1.1
VPS8-211ENST00000452140 SULF1Q8IWU6 871 aa8.18□□□□□ -1.1
VPS8-211ENST00000452140 ZFRQ96KR1 1074 aaKnown RBP8.18□□□□□ -1.1
VPS8-211ENST00000452140 TBC1D2Q9BYX2 928 aa8.18□□□□□ -1.1
VPS8-211ENST00000452140 GOPCQ9HD26 462 aa8.18□□□□□ -1.1
VPS8-211ENST00000452140 FAM98CQ17RN3 349 aaKnown RBP8.17□□□□□ -1.1
VPS8-211ENST00000452140 PROCA1Q8NCQ7 364 aaPredicted RBP8.17□□□□□ -1.1
VPS8-211ENST00000452140 RSPH6AQ9H0K4 717 aa8.17□□□□□ -1.1
VPS8-211ENST00000452140 BCAMP50895 628 aa8.16□□□□□ -1.1
VPS8-211ENST00000452140 SKIV2LQ15477 1246 aaKnown RBP8.16□□□□□ -1.1
VPS8-211ENST00000452140 SPIRE2Q8WWL2 714 aa8.16□□□□□ -1.1
VPS8-211ENST00000452140 RNF40O75150 1001 aa8.15□□□□□ -1.1
VPS8-211ENST00000452140 ITGBL1O95965 494 aaPredicted RBP8.15□□□□□ -1.1
VPS8-211ENST00000452140 SAMD7Q7Z3H4 446 aa8.15□□□□□ -1.1
VPS8-211ENST00000452140 SLC10A3P09131 477 aa8.14□□□□□ -1.11
VPS8-211ENST00000452140 CLK2P49760 499 aaKnown RBP8.14□□□□□ -1.11
VPS8-211ENST00000452140 NUTM1Q86Y26 1132 aa8.14□□□□□ -1.11
VPS8-211ENST00000452140 LIMD1Q9UGP4 676 aa8.13□□□□□ -1.11
VPS8-211ENST00000452140 HDGFP51858 240 aaKnown RBP8.12□□□□□ -1.11
VPS8-211ENST00000452140 CSPP1Q1MSJ5 1256 aa8.12□□□□□ -1.11
VPS8-211ENST00000452140 LRCH3Q96II8 777 aa8.12□□□□□ -1.11
VPS8-211ENST00000452140 IRX2Q9BZI1 471 aaPredicted RBP8.12□□□□□ -1.11
VPS8-211ENST00000452140 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.12□□□□□ -1.11
VPS8-211ENST00000452140 MOXD2PA6NHM9 499 aa8.11□□□□□ -1.11
VPS8-211ENST00000452140 NDUFV2P19404 249 aa8.11□□□□□ -1.11
VPS8-211ENST00000452140 RIC3Q7Z5B4 369 aa8.11□□□□□ -1.11
VPS8-211ENST00000452140 WBP1LQ9NX94 342 aa8.11□□□□□ -1.11
VPS8-211ENST00000452140 TSR3Q9UJK0 312 aaKnown RBP8.11□□□□□ -1.11
VPS8-211ENST00000452140 KDM4AO75164 1064 aa8.1□□□□□ -1.11
VPS8-211ENST00000452140 GCGRP47871 477 aa8.1□□□□□ -1.11
VPS8-211ENST00000452140 KCNC4Q03721 635 aa8.1□□□□□ -1.11
VPS8-211ENST00000452140 DIXDC1Q155Q3 683 aa8.1□□□□□ -1.11
VPS8-211ENST00000452140 FBXO31Q5XUX0 539 aaPredicted RBP8.1□□□□□ -1.11
VPS8-211ENST00000452140 HLA-CQ95604 372 aa8.1□□□□□ -1.11
VPS8-211ENST00000452140 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.1□□□□□ -1.11
VPS8-211ENST00000452140 RSPH4AQ5TD94 716 aa8.09□□□□□ -1.11
VPS8-211ENST00000452140 RSBN1LQ6PCB5 846 aaPredicted RBP8.09□□□□□ -1.11
VPS8-211ENST00000452140 ERICH6Q7L0X2 663 aa8.09□□□□□ -1.11
VPS8-211ENST00000452140 SLF2Q8IX21 1173 aa8.09□□□□□ -1.11
VPS8-211ENST00000452140 CFHP08603 1231 aa8.08□□□□□ -1.12
VPS8-211ENST00000452140 GUCA2AQ02747 115 aa8.08□□□□□ -1.12
VPS8-211ENST00000452140 SPTLC1O15269 473 aa8.07□□□□□ -1.12
VPS8-211ENST00000452140 HOXA2O43364 376 aa8.07□□□□□ -1.12
VPS8-211ENST00000452140 SLC4A3P48751 1232 aa8.07□□□□□ -1.12
VPS8-211ENST00000452140 HPS5Q9UPZ3 1129 aa8.07□□□□□ -1.12
VPS8-211ENST00000452140 PCDHB15Q9Y5E8 787 aa8.07□□□□□ -1.12
VPS8-211ENST00000452140 QPCTQ16769 361 aa8.06□□□□□ -1.12
VPS8-211ENST00000452140 RFC5P40937 340 aa8.05□□□□□ -1.12
VPS8-211ENST00000452140 PPP4CP60510 307 aa8.05□□□□□ -1.12
VPS8-211ENST00000452140 FUT2Q10981 343 aa8.05□□□□□ -1.12
VPS8-211ENST00000452140 CABLES1Q8TDN4 633 aa8.05□□□□□ -1.12
VPS8-211ENST00000452140 FDX1P10109 184 aa8.03□□□□□ -1.12
VPS8-211ENST00000452140 USP46P62068 366 aa8.03□□□□□ -1.12
VPS8-211ENST00000452140 PCDHGC3Q9UN70 934 aa8.03□□□□□ -1.12
VPS8-211ENST00000452140 SUPT5HO00267 1087 aaKnown RBP8.02□□□□□ -1.13
VPS8-211ENST00000452140 FLIIQ13045 1269 aa8.02□□□□□ -1.13
VPS8-211ENST00000452140 MCM6Q14566 821 aa8.02□□□□□ -1.13
VPS8-211ENST00000452140 RTL5Q5HYW3 569 aaPredicted RBP8.02□□□□□ -1.13
VPS8-211ENST00000452140 NUTM2BA6NNL0 878 aaPredicted RBP8.01□□□□□ -1.13
VPS8-211ENST00000452140 NUTM2EB1AL46 878 aaPredicted RBP8.01□□□□□ -1.13
VPS8-211ENST00000452140 LILRB3O75022 631 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms