RNA–Protein interactions for RNA: ENST00000452067.1

NUCKS1P1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1, humanhuman

BASIC

Gene NUCKS1P1, Length 703 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1P1-201ENST00000452067 HPS5Q9UPZ3 1129 aa13.57□□□□□ -0.24
NUCKS1P1-201ENST00000452067 HDGFP51858 240 aaKnown RBP13.56□□□□□ -0.24
NUCKS1P1-201ENST00000452067 PHOX2BQ99453 314 aa13.56□□□□□ -0.24
NUCKS1P1-201ENST00000452067 WBP1LQ9NX94 342 aa13.56□□□□□ -0.24
NUCKS1P1-201ENST00000452067 TSR3Q9UJK0 312 aaKnown RBP13.56□□□□□ -0.24
NUCKS1P1-201ENST00000452067 DCAF1Q9Y4B6 1507 aa13.54□□□□□ -0.24
NUCKS1P1-201ENST00000452067 CCDC102AQ96A19 550 aa13.53□□□□□ -0.24
NUCKS1P1-201ENST00000452067 SLF2Q8IX21 1173 aa13.52□□□□□ -0.25
NUCKS1P1-201ENST00000452067 RNF40O75150 1001 aa13.51□□□□□ -0.25
NUCKS1P1-201ENST00000452067 NLRP7Q8WX94 980 aa13.51□□□□□ -0.25
NUCKS1P1-201ENST00000452067 PPP4CP60510 307 aa13.5□□□□□ -0.25
NUCKS1P1-201ENST00000452067 NYAP1Q6ZVC0 841 aa13.5□□□□□ -0.25
NUCKS1P1-201ENST00000452067 KRI1Q8N9T8 703 aaKnown RBP13.48□□□□□ -0.25
NUCKS1P1-201ENST00000452067 SLC4A3P48751 1232 aa13.47□□□□□ -0.25
NUCKS1P1-201ENST00000452067 DAXXQ9UER7 740 aaPredicted RBP13.45□□□□□ -0.26
NUCKS1P1-201ENST00000452067 NECTIN2Q92692 538 aa13.44□□□□□ -0.26
NUCKS1P1-201ENST00000452067 SLC10A3P09131 477 aa13.42□□□□□ -0.26
NUCKS1P1-201ENST00000452067 APLP1P51693 650 aa13.42□□□□□ -0.26
NUCKS1P1-201ENST00000452067 MDM2Q00987 491 aaPredicted RBP13.39□□□□□ -0.27
NUCKS1P1-201ENST00000452067 PLA2G2EQ9NZK7 142 aa13.37□□□□□ -0.27
NUCKS1P1-201ENST00000452067 MYO15BQ96JP2 1530 aa13.37□□□□□ -0.27
NUCKS1P1-201ENST00000452067 DDX11L8A8MPP1 907 aa13.36□□□□□ -0.27
NUCKS1P1-201ENST00000452067 CFHP08603 1231 aa13.36□□□□□ -0.27
NUCKS1P1-201ENST00000452067 AK7Q96M32 723 aa13.36□□□□□ -0.27
NUCKS1P1-201ENST00000452067 TMUB1Q9BVT8 246 aa13.36□□□□□ -0.27
NUCKS1P1-201ENST00000452067 ITGBL1O95965 494 aaPredicted RBP13.35□□□□□ -0.27
NUCKS1P1-201ENST00000452067 AMHR2Q16671 573 aa13.35□□□□□ -0.27
NUCKS1P1-201ENST00000452067 SLC24A3Q9HC58 644 aa13.35□□□□□ -0.27
NUCKS1P1-201ENST00000452067 TRIM66O15016 1216 aa13.34□□□□□ -0.27
NUCKS1P1-201ENST00000452067 CLCN1P35523 988 aa13.34□□□□□ -0.27
NUCKS1P1-201ENST00000452067 RSPH4AQ5TD94 716 aa13.34□□□□□ -0.27
NUCKS1P1-201ENST00000452067 SULF1Q8IWU6 871 aa13.34□□□□□ -0.27
NUCKS1P1-201ENST00000452067 PRR14Q9BWN1 585 aa13.34□□□□□ -0.27
NUCKS1P1-201ENST00000452067 GPCPD1Q9NPB8 672 aa13.34□□□□□ -0.27
NUCKS1P1-201ENST00000452067 RDH13Q8NBN7 331 aa13.33□□□□□ -0.28
NUCKS1P1-201ENST00000452067 KMT5BQ4FZB7 885 aa13.32□□□□□ -0.28
NUCKS1P1-201ENST00000452067 REPIN1Q9BWE0 567 aaKnown RBP13.32□□□□□ -0.28
NUCKS1P1-201ENST00000452067 ACTN4O43707 911 aaKnown RBP13.31□□□□□ -0.28
NUCKS1P1-201ENST00000452067 TJAP1Q5JTD0 557 aa13.31□□□□□ -0.28
NUCKS1P1-201ENST00000452067 IFFO2Q5TF58 517 aa13.3□□□□□ -0.28
NUCKS1P1-201ENST00000452067 MTRQ99707 1265 aa13.3□□□□□ -0.28
NUCKS1P1-201ENST00000452067 CD46P15529 392 aa13.29□□□□□ -0.28
NUCKS1P1-201ENST00000452067 FAM217BQ9NTX9 383 aaPredicted RBP13.29□□□□□ -0.28
NUCKS1P1-201ENST00000452067 GCGRP47871 477 aa13.27□□□□□ -0.29
NUCKS1P1-201ENST00000452067 TTLL12Q14166 644 aaPredicted RBP13.27□□□□□ -0.29
NUCKS1P1-201ENST00000452067 PCDHB3Q9Y5E6 796 aa13.27□□□□□ -0.29
NUCKS1P1-201ENST00000452067 KCNC4Q03721 635 aa13.26□□□□□ -0.29
NUCKS1P1-201ENST00000452067 PARP9Q8IXQ6 854 aa13.26□□□□□ -0.29
NUCKS1P1-201ENST00000452067 IL21Q9HBE4 155 aa13.26□□□□□ -0.29
NUCKS1P1-201ENST00000452067 COPS2P61201 443 aa13.24□□□□□ -0.29
NUCKS1P1-201ENST00000452067 BLOC1S3Q6QNY0 202 aa13.24□□□□□ -0.29
NUCKS1P1-201ENST00000452067 NACADO15069 1562 aa13.24□□□□□ -0.29
NUCKS1P1-201ENST00000452067 PDE4DQ08499 809 aa13.23□□□□□ -0.29
NUCKS1P1-201ENST00000452067 GIGYF2Q6Y7W6 1299 aaKnown RBP13.23□□□□□ -0.29
NUCKS1P1-201ENST00000452067 ZNF516Q92618 1163 aa13.23□□□□□ -0.29
NUCKS1P1-201ENST00000452067 ABCC9O60706 1549 aa13.23□□□□□ -0.29
NUCKS1P1-201ENST00000452067 SSTR3P32745 418 aaPredicted RBP13.21□□□□□ -0.29
NUCKS1P1-201ENST00000452067 FUT2Q10981 343 aa13.21□□□□□ -0.29
NUCKS1P1-201ENST00000452067 PUS10Q3MIT2 529 aaKnown RBP13.19□□□□□ -0.3
NUCKS1P1-201ENST00000452067 ZPR1O75312 459 aa13.18□□□□□ -0.3
NUCKS1P1-201ENST00000452067 TPRNQ4KMQ1 711 aa13.18□□□□□ -0.3
NUCKS1P1-201ENST00000452067 A0A0G2JS52 829 aa13.16□□□□□ -0.3
NUCKS1P1-201ENST00000452067 KDM4AO75164 1064 aa13.16□□□□□ -0.3
NUCKS1P1-201ENST00000452067 ATP6V1AP38606 617 aa13.16□□□□□ -0.3
NUCKS1P1-201ENST00000452067 MORN1Q5T089 497 aa13.16□□□□□ -0.3
NUCKS1P1-201ENST00000452067 NR1I2O75469 434 aa13.15□□□□□ -0.3
NUCKS1P1-201ENST00000452067 MS4A1P11836 297 aa13.15□□□□□ -0.3
NUCKS1P1-201ENST00000452067 NKX2-3Q8TAU0 364 aa13.15□□□□□ -0.3
NUCKS1P1-201ENST00000452067 SHROOM4Q9ULL8 1493 aa13.14□□□□□ -0.31
NUCKS1P1-201ENST00000452067 USP46P62068 366 aa13.13□□□□□ -0.31
NUCKS1P1-201ENST00000452067 SCUBE3Q8IX30 993 aa13.13□□□□□ -0.31
NUCKS1P1-201ENST00000452067 TLL1O43897 1013 aa13.12□□□□□ -0.31
NUCKS1P1-201ENST00000452067 BEGAINQ9BUH8 593 aa13.11□□□□□ -0.31
NUCKS1P1-201ENST00000452067 SLC27A5Q9Y2P5 690 aa13.11□□□□□ -0.31
NUCKS1P1-201ENST00000452067 HOXA2O43364 376 aa13.1□□□□□ -0.31
NUCKS1P1-201ENST00000452067 GRIPAP1Q4V328 841 aa13.1□□□□□ -0.31
NUCKS1P1-201ENST00000452067 RB1CC1Q8TDY2 1594 aa13.1□□□□□ -0.31
NUCKS1P1-201ENST00000452067 NUTM1Q86Y26 1132 aa13.09□□□□□ -0.31
NUCKS1P1-201ENST00000452067 SPIRE2Q8WWL2 714 aa13.08□□□□□ -0.32
NUCKS1P1-201ENST00000452067 HLA-CQ95604 372 aa13.08□□□□□ -0.32
NUCKS1P1-201ENST00000452067 THAP11Q96EK4 314 aa13.07□□□□□ -0.32
NUCKS1P1-201ENST00000452067 GPBP1L1Q9HC44 474 aaPredicted RBP13.06□□□□□ -0.32
NUCKS1P1-201ENST00000452067 ADH1BP00325 375 aa13.05□□□□□ -0.32
NUCKS1P1-201ENST00000452067 SALL2Q9Y467 1007 aaPredicted RBP13.05□□□□□ -0.32
NUCKS1P1-201ENST00000452067 PPP1R18Q6NYC8 613 aa13.04□□□□□ -0.32
NUCKS1P1-201ENST00000452067 GUCA2AQ02747 115 aa13.03□□□□□ -0.32
NUCKS1P1-201ENST00000452067 BRICD5Q6PL45 260 aa13.03□□□□□ -0.32
NUCKS1P1-201ENST00000452067 KDM4CQ9H3R0 1056 aa13.03□□□□□ -0.32
NUCKS1P1-201ENST00000452067 RNF19BQ6ZMZ0 732 aa13.02□□□□□ -0.33
NUCKS1P1-201ENST00000452067 SPSB2Q99619 263 aa13.02□□□□□ -0.33
NUCKS1P1-201ENST00000452067 TBC1D2Q9BYX2 928 aa13.02□□□□□ -0.33
NUCKS1P1-201ENST00000452067 FMNL1O95466 1100 aaPredicted RBP13.01□□□□□ -0.33
NUCKS1P1-201ENST00000452067 Q3C1V9 767 aa13.01□□□□□ -0.33
NUCKS1P1-201ENST00000452067 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.01□□□□□ -0.33
NUCKS1P1-201ENST00000452067 MOXD2PA6NHM9 499 aa13□□□□□ -0.33
NUCKS1P1-201ENST00000452067 PRKCSHP14314 528 aaPredicted RBP13□□□□□ -0.33
NUCKS1P1-201ENST00000452067 S1PR4O95977 384 aa12.99□□□□□ -0.33
NUCKS1P1-201ENST00000452067 NDUFV2P19404 249 aa12.99□□□□□ -0.33
NUCKS1P1-201ENST00000452067 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
NUCKS1P1-201ENST00000452067 RGS20O76081 388 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms