RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 RGL3Q3MIN7 710 aa35.07■■■■□ 3.21
CPSF4-207ENST00000451876 SCAF11Q99590 1463 aaKnown RBP35.07■■■■□ 3.2
CPSF4-207ENST00000451876 LTKP29376 864 aa35.06■■■■□ 3.2
CPSF4-207ENST00000451876 NCKAP5LQ9HCH0 1330 aa35.06■■■■□ 3.2
CPSF4-207ENST00000451876 NUTM2DQ5VT03 806 aaPredicted RBP35.03■■■■□ 3.2
CPSF4-207ENST00000451876 ANKLE2Q86XL3 938 aa35.03■■■■□ 3.2
CPSF4-207ENST00000451876 TXNDC2Q86VQ3 553 aa35.03■■■■□ 3.2
CPSF4-207ENST00000451876 CCER1Q8TC90 406 aaPredicted RBP35.02■■■■□ 3.2
CPSF4-207ENST00000451876 NEUROD1Q13562 356 aa35■■■■□ 3.19
CPSF4-207ENST00000451876 IQGAP1P46940 1657 aa35■■■■□ 3.19
CPSF4-207ENST00000451876 EID1Q9Y6B2 187 aa34.99■■■■□ 3.19
CPSF4-207ENST00000451876 MED14O60244 1454 aa34.99■■■■□ 3.19
CPSF4-207ENST00000451876 RPGRIP1LQ68CZ1 1315 aa34.96■■■■□ 3.19
CPSF4-207ENST00000451876 CLSPNQ9HAW4 1339 aa34.94■■■■□ 3.18
CPSF4-207ENST00000451876 NPHP4O75161 1426 aaPredicted RBP34.94■■■■□ 3.18
CPSF4-207ENST00000451876 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.94■■■■□ 3.18
CPSF4-207ENST00000451876 PPP1R15AO75807 674 aaPredicted RBP34.93■■■■□ 3.18
CPSF4-207ENST00000451876 SENP3Q9H4L4 574 aaPredicted RBP34.92■■■■□ 3.18
CPSF4-207ENST00000451876 HDGFP51858 240 aaKnown RBP34.92■■■■□ 3.18
CPSF4-207ENST00000451876 NRXN3Q9Y4C0 1643 aa34.91■■■■□ 3.18
CPSF4-207ENST00000451876 PLEKHG1Q9ULL1 1385 aa34.9■■■■□ 3.18
CPSF4-207ENST00000451876 MYOM2P54296 1465 aa34.87■■■■□ 3.17
CPSF4-207ENST00000451876 SETBP1Q9Y6X0 1596 aa34.86■■■■□ 3.17
CPSF4-207ENST00000451876 ADGRF5Q8IZF2 1346 aa34.85■■■■□ 3.17
CPSF4-207ENST00000451876 VGFO15240 615 aaPredicted RBP34.84■■■■□ 3.17
CPSF4-207ENST00000451876 DCAF11Q8TEB1 546 aa34.84■■■■□ 3.17
CPSF4-207ENST00000451876 L3MBTL2Q969R5 705 aa34.82■■■■□ 3.16
CPSF4-207ENST00000451876 NRXN1Q9ULB1 1477 aa34.82■■■■□ 3.16
CPSF4-207ENST00000451876 ADAMTS13Q76LX8 1427 aa34.81■■■■□ 3.16
CPSF4-207ENST00000451876 KDM2AQ9Y2K7 1162 aa34.81■■■■□ 3.16
CPSF4-207ENST00000451876 DMRT2Q9Y5R5 561 aa34.8■■■■□ 3.16
CPSF4-207ENST00000451876 SETD1AO15047 1707 aaKnown RBP34.8■■■■□ 3.16
CPSF4-207ENST00000451876 PIK3C2GO75747 1445 aa34.79■■■■□ 3.16
CPSF4-207ENST00000451876 BCANQ96GW7 911 aa34.79■■■■□ 3.16
CPSF4-207ENST00000451876 TONSLQ96HA7 1378 aa34.78■■■■□ 3.16
CPSF4-207ENST00000451876 SLC26A8Q96RN1 970 aa34.77■■■■□ 3.16
CPSF4-207ENST00000451876 DIP2AQ14689 1571 aa34.76■■■■□ 3.16
CPSF4-207ENST00000451876 ALKQ9UM73 1620 aa34.75■■■■□ 3.15
CPSF4-207ENST00000451876 LAMC1P11047 1609 aa34.69■■■■□ 3.14
CPSF4-207ENST00000451876 STAC3Q96MF2 364 aa34.69■■■■□ 3.14
CPSF4-207ENST00000451876 PRAG1Q86YV5 1406 aa34.68■■■■□ 3.14
CPSF4-207ENST00000451876 STRCP1A6NGW2 1772 aa34.68■■■■□ 3.14
CPSF4-207ENST00000451876 TBX22Q9Y458 520 aa34.66■■■■□ 3.14
CPSF4-207ENST00000451876 CHD2O14647 1828 aaKnown RBP34.65■■■■□ 3.14
CPSF4-207ENST00000451876 ASXL1Q8IXJ9 1541 aa34.64■■■■□ 3.14
CPSF4-207ENST00000451876 METP08581 1390 aa34.64■■■■□ 3.14
CPSF4-207ENST00000451876 ZNF335Q9H4Z2 1342 aaPredicted RBP34.63■■■■□ 3.13
CPSF4-207ENST00000451876 KIAA1210Q9ULL0 1709 aa34.61■■■■□ 3.13
CPSF4-207ENST00000451876 CFAP70Q5T0N1 1121 aa34.61■■■■□ 3.13
CPSF4-207ENST00000451876 NWD1Q149M9 1564 aa34.6■■■■□ 3.13
CPSF4-207ENST00000451876 C14orf93Q9H972 538 aaKnown RBP34.59■■■■□ 3.13
CPSF4-207ENST00000451876 TRPM1Q7Z4N2 1603 aa34.59■■■■□ 3.13
CPSF4-207ENST00000451876 PTPRUQ92729 1446 aa34.58■■■■□ 3.13
CPSF4-207ENST00000451876 TIMELESSQ9UNS1 1208 aa34.57■■■■□ 3.12
CPSF4-207ENST00000451876 XRN1Q8IZH2 1706 aaKnown RBP34.57■■■■□ 3.12
CPSF4-207ENST00000451876 PIK3R4Q99570 1358 aa34.56■■■■□ 3.12
CPSF4-207ENST00000451876 NBPF8Q3BBV2 869 aa34.55■■■■□ 3.12
CPSF4-207ENST00000451876 ADGRB1O14514 1584 aa34.55■■■■□ 3.12
CPSF4-207ENST00000451876 LTBP4Q8N2S1 1624 aa34.55■■■■□ 3.12
CPSF4-207ENST00000451876 TMEM132EQ6IEE7 984 aa34.52■■■■□ 3.12
CPSF4-207ENST00000451876 KCNA6P17658 529 aa34.49■■■■□ 3.11
CPSF4-207ENST00000451876 KNDC1Q76NI1 1749 aa34.47■■■■□ 3.11
CPSF4-207ENST00000451876 NBPF1Q3BBV0 1214 aa34.46■■■■□ 3.11
CPSF4-207ENST00000451876 AMOTL2Q9Y2J4 779 aa34.46■■■■□ 3.11
CPSF4-207ENST00000451876 NKTRP30414 1462 aaKnown RBP34.45■■■■□ 3.11
CPSF4-207ENST00000451876 CPS1P31327 1500 aa34.45■■■■□ 3.11
CPSF4-207ENST00000451876 YTHDC2Q9H6S0 1430 aaKnown RBP34.45■■■■□ 3.11
CPSF4-207ENST00000451876 RALGAPBQ86X10 1494 aa34.43■■■■□ 3.1
CPSF4-207ENST00000451876 XIRP1Q702N8 1843 aaKnown RBP34.42■■■■□ 3.1
CPSF4-207ENST00000451876 LRPPRCP42704 1394 aaKnown RBP34.41■■■■□ 3.1
CPSF4-207ENST00000451876 STK26Q9P289 416 aa34.4■■■■□ 3.1
CPSF4-207ENST00000451876 LRRC7Q96NW7 1537 aa34.39■■■■□ 3.1
CPSF4-207ENST00000451876 TECPR2O15040 1411 aa34.39■■■■□ 3.1
CPSF4-207ENST00000451876 ROCK2O75116 1388 aaKnown RBP34.38■■■■□ 3.09
CPSF4-207ENST00000451876 PTCH1Q13635 1447 aa34.37■■■■□ 3.09
CPSF4-207ENST00000451876 ARHGEF28Q8N1W1 1705 aaKnown RBP34.37■■■■□ 3.09
CPSF4-207ENST00000451876 ROBO2Q9HCK4 1378 aa34.36■■■■□ 3.09
CPSF4-207ENST00000451876 ABCC11Q96J66 1382 aa34.36■■■■□ 3.09
CPSF4-207ENST00000451876 RBM33Q96EV2 1170 aaKnown RBP34.34■■■■□ 3.09
CPSF4-207ENST00000451876 GPRASP1Q5JY77 1395 aa34.33■■■■□ 3.09
CPSF4-207ENST00000451876 DLC1Q96QB1 1528 aa34.31■■■■□ 3.08
CPSF4-207ENST00000451876 TMEM94Q12767 1356 aa34.3■■■■□ 3.08
CPSF4-207ENST00000451876 PROSER2Q86WR7 435 aaPredicted RBP34.3■■■■□ 3.08
CPSF4-207ENST00000451876 TRAK1Q9UPV9 953 aa34.3■■■■□ 3.08
CPSF4-207ENST00000451876 NALCNQ8IZF0 1738 aa34.28■■■■□ 3.08
CPSF4-207ENST00000451876 PLEKHH1Q9ULM0 1364 aa34.27■■■■□ 3.08
CPSF4-207ENST00000451876 FAM135BQ49AJ0 1406 aa34.24■■■■□ 3.07
CPSF4-207ENST00000451876 WAPLQ7Z5K2 1190 aa34.24■■■■□ 3.07
CPSF4-207ENST00000451876 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.23■■■■□ 3.07
CPSF4-207ENST00000451876 CARD11Q9BXL7 1154 aa34.23■■■■□ 3.07
CPSF4-207ENST00000451876 CERKQ8TCT0 537 aa34.21■■■■□ 3.07
CPSF4-207ENST00000451876 PRAM1Q96QH2 718 aa34.21■■■■□ 3.07
CPSF4-207ENST00000451876 SIRT1Q96EB6 747 aa34.19■■■■□ 3.06
CPSF4-207ENST00000451876 NCOA3Q9Y6Q9 1424 aa34.18■■■■□ 3.06
CPSF4-207ENST00000451876 IQSEC2Q5JU85 1478 aa34.17■■■■□ 3.06
CPSF4-207ENST00000451876 QRICH2Q9H0J4 1663 aa34.17■■■■□ 3.06
CPSF4-207ENST00000451876 SAFB2Q14151 953 aaKnown RBP eCLIP34.16■■■■□ 3.06
CPSF4-207ENST00000451876 ADGRL3Q9HAR2 1447 aa34.16■■■■□ 3.06
CPSF4-207ENST00000451876 C14orf37Q86TY3 774 aa34.14■■■■□ 3.06
CPSF4-207ENST00000451876 POGKQ9P215 609 aa34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms